3AL7
 
 | | Recombinant thaumatin I at 1.1 A | | Descriptor: | GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I | | Authors: | Masuda, T, Mikami, B, Kitabatake, N. | | Deposit date: | 2010-07-27 | | Release date: | 2011-06-08 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.1 Å) | | Cite: | High-resolution structure of the recombinant sweet-tasting protein thaumatin I
Acta Crystallogr.,Sect.F, 67, 2011
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3A54
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3A55
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3AFM
 | | Crystal structure of aldose reductase A1-R responsible for alginate metabolism | | Descriptor: | Carbonyl reductase | | Authors: | Takase, R, Ochiai, A, Mikami, B, Hashimoto, W, Murata, K. | | Deposit date: | 2010-03-10 | | Release date: | 2010-08-11 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.65 Å) | | Cite: | Molecular identification of unsaturated uronate reductase prerequisite for alginate metabolism in Sphingomonas sp. A1
Biochim.Biophys.Acta, 1804, 2010
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3ALD
 | | Crystal structure of sweet-tasting protein Thaumatin I at 1.10 A | | Descriptor: | GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I | | Authors: | Masuda, T, Mikami, B, Kitabatake, N. | | Deposit date: | 2010-07-29 | | Release date: | 2011-06-08 | | Last modified: | 2011-11-02 | | Method: | X-RAY DIFFRACTION (1.1 Å) | | Cite: | High-resolution structure of the recombinant sweet-tasting protein thaumatin I
Acta Crystallogr.,Sect.F, 67, 2011
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3AMI
 | | The crystal structure of the M16B metallopeptidase subunit from Sphingomonas sp. A1 | | Descriptor: | zinc peptidase | | Authors: | Maruyama, Y, Chuma, A, Mikami, B, Hashimoto, W, Murata, K. | | Deposit date: | 2010-08-20 | | Release date: | 2011-02-02 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (2.4 Å) | | Cite: | Heterosubunit composition and crystal structures of a novel bacterial M16B metallopeptidase
J.Mol.Biol., 407, 2011
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3AJ3
 | | Crystal structure of selenomethionine substituted 4-pyridoxolactonase from Mesorhizobium loti | | Descriptor: | 4-pyridoxolactonase, PHOSPHATE ION, ZINC ION | | Authors: | Kobayashi, J, Yoshikane, Y, Baba, S, Mikami, B, Yagi, T. | | Deposit date: | 2010-05-21 | | Release date: | 2011-05-25 | | Last modified: | 2024-03-20 | | Method: | X-RAY DIFFRACTION (1.577 Å) | | Cite: | Structure of 4-pyridoxolactonase from Mesorhizobium loti.
Acta Crystallogr.,Sect.F, 70, 2014
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2Z42
 | | Crystal Structure of Family 7 Alginate Lyase A1-II' from Sphingomonas sp. A1 | | Descriptor: | Alginate lyase, SULFATE ION | | Authors: | Ogura, K, Yamasaki, M, Hashimoto, W, Mikami, B, Murata, K. | | Deposit date: | 2007-06-12 | | Release date: | 2008-05-27 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.6 Å) | | Cite: | Substrate Recognition by Family 7 Alginagte Lyase from Sphingomonas sp. A1
To be published
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2ZUY
 | | Crystal structure of exotype rhamnogalacturonan lyase YesX | | Descriptor: | CALCIUM ION, YesX protein | | Authors: | Ochiai, A, Itoh, T, Mikami, B, Hashimoto, W, Murata, K. | | Deposit date: | 2008-10-28 | | Release date: | 2009-02-03 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.65 Å) | | Cite: | Structural determinants responsible for substrate recognition and mode of action in family 11 polysaccharide lyases
J.Biol.Chem., 284, 2009
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2Z72
 | | New Structure Of Cold-Active Protein Tyrosine Phosphatase At 1.1 Angstrom | | Descriptor: | Protein-tyrosine-phosphatase, ZINC ION | | Authors: | Tsuruta, H, Mikami, B, Yamamoto, C, Yamagata, H. | | Deposit date: | 2007-08-10 | | Release date: | 2008-07-29 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.1 Å) | | Cite: | The role of group bulkiness in the catalytic activity of psychrophile cold-active protein tyrosine phosphatase
Febs J., 275, 2008
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2ZA9
 | | Crystal Structure of Alginate lyase A1-II' N141C/N199C | | Descriptor: | Alginate lyase, SULFATE ION | | Authors: | Ogura, K, Yamasaki, M, Mikami, B, Hashimoto, W, Murata, K. | | Deposit date: | 2007-10-02 | | Release date: | 2008-05-27 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Substrate Recognition in Tunnel of Family 7 Alginate Lyase from Sphingomonas sp. A1
To be Published
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2ZBM
 | | Crystal Structure of I115M Mutant Cold-Active Protein Tyrosine Phosphatase | | Descriptor: | Protein-tyrosine-phosphatase, ZINC ION | | Authors: | Tsuruta, H, Mikami, B, Yamamoto, C, Yamagata, H. | | Deposit date: | 2007-10-24 | | Release date: | 2008-07-29 | | Last modified: | 2021-11-10 | | Method: | X-RAY DIFFRACTION (1.5 Å) | | Cite: | The role of group bulkiness in the catalytic activity of psychrophile cold-active protein tyrosine phosphatase
Febs J., 275, 2008
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2ZYC
 | | Crystal structure of peptidoglycan hydrolase from Sphingomonas sp. A1 | | Descriptor: | PHOSPHATE ION, Peptidoglycan hydrolase FlgJ | | Authors: | Ochiai, A, Mikami, B, Hashimoto, W, Murata, K. | | Deposit date: | 2009-01-19 | | Release date: | 2009-02-03 | | Last modified: | 2024-05-29 | | Method: | X-RAY DIFFRACTION (1.74 Å) | | Cite: | Crystal structure of the glycosidase family 73 peptidoglycan hydrolase FlgJ
Biochem.Biophys.Res.Commun., 381, 2009
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3AJQ
 | | Crystal structure of human H ferritin E140Q mutant | | Descriptor: | Ferritin heavy chain, MAGNESIUM ION | | Authors: | Masuda, T, Mikami, B. | | Deposit date: | 2010-06-11 | | Release date: | 2010-08-25 | | Last modified: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (1.58 Å) | | Cite: | The universal mechanism for iron translocation to the ferroxidase site in ferritin, which is mediated by the well conserved transit site
Biochem.Biophys.Res.Commun., 400, 2010
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3AJP
 | | Crystal structure of human H ferritin E140A mutant | | Descriptor: | Ferritin heavy chain, MAGNESIUM ION | | Authors: | Masuda, T, Mikami, B. | | Deposit date: | 2010-06-11 | | Release date: | 2010-08-25 | | Last modified: | 2024-04-03 | | Method: | X-RAY DIFFRACTION (1.901 Å) | | Cite: | The universal mechanism for iron translocation to the ferroxidase site in ferritin, which is mediated by the well conserved transit site
Biochem.Biophys.Res.Commun., 400, 2010
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3ANJ
 | | Crystal structure of unsaturated glucuronyl hydrolase from Streptcoccus agalactiae | | Descriptor: | Putative uncharacterized protein gbs1889 | | Authors: | Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K. | | Deposit date: | 2010-09-02 | | Release date: | 2010-10-06 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
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3AFL
 | | Crystal structure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide | | Descriptor: | 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid, Oligo alginate lyase | | Authors: | Ochiai, A, Yamasaki, M, Mikami, B, Hashimoto, W, Murata, K. | | Deposit date: | 2010-03-09 | | Release date: | 2010-04-28 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.99 Å) | | Cite: | Crystal structure of exotype alginate lyase Atu3025 from Agrobacterium tumefaciens
J.Biol.Chem., 285, 2010
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3AJO
 | | Crystal structure of wild-type human ferritin H chain | | Descriptor: | Ferritin heavy chain, MAGNESIUM ION | | Authors: | Masuda, T, Mikami, B. | | Deposit date: | 2010-06-11 | | Release date: | 2010-08-25 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (1.52 Å) | | Cite: | The universal mechanism for iron translocation to the ferroxidase site in ferritin, which is mediated by the well conserved transit site
Biochem.Biophys.Res.Commun., 400, 2010
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3ANI
 | | Crystal structure of unsaturated glucuronyl hydrolase mutant D175N from Streptcoccus agalactiae | | Descriptor: | Putative uncharacterized protein gbs1889 | | Authors: | Nakamichi, Y, Maruyama, Y, Mikami, B, Hashimoto, W, Murata, K. | | Deposit date: | 2010-09-02 | | Release date: | 2010-10-06 | | Last modified: | 2023-11-01 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Structural determinants in streptococcal unsaturated glucuronyl hydrolase for recognition of glycosaminoglycan sulfate groups
J.Biol.Chem., 286, 2011
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3AOK
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3ATG
 | | endo-1,3-beta-glucanase from Cellulosimicrobium cellulans | | Descriptor: | CALCIUM ION, GLUCANASE, GLYCEROL, ... | | Authors: | Tanabe, Y, Pang, Z, Oda, M, Mikami, B. | | Deposit date: | 2011-01-04 | | Release date: | 2012-01-18 | | Last modified: | 2024-03-13 | | Method: | X-RAY DIFFRACTION (1.66 Å) | | Cite: | Structural and thermodynamic characterization of endo-1,3-beta-glucanase: Insights into the substrate recognition mechanism.
Biochim. Biophys. Acta, 1866, 2018
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3WXS
 | | Thaumatin structure determined by SPring-8 Angstrom Compact free electron Laser (SACLA) | | Descriptor: | L(+)-TARTARIC ACID, thaumatin I | | Authors: | Masuda, T, Nango, E, Sugahara, M, Mizohata, E, Tanaka, T, Tanaka, R, Suzuki, M, Mikami, B, Iwata, S. | | Deposit date: | 2014-08-07 | | Release date: | 2014-11-05 | | Last modified: | 2023-11-08 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Grease matrix as a versatile carrier of proteins for serial crystallography
Nat. Methods, 12, 2015
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