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PDB: 256 results

5LFG
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BU of 5lfg by Molmil
X-ray structure of a new fully ligated carbomonoxy form of Trematomus newnesi hemoglobin (Hb1TnCO).
Descriptor: CARBON MONOXIDE, Hemoglobin subunit alpha-1, Hemoglobin subunit beta-1/2, ...
Authors:Vitagliano, L, Mazzarella, L, Merlino, A, Vergara, A.
Deposit date:2016-07-01
Release date:2017-08-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Fine Sampling of the RT Quaternary-Structure Transition of a Tetrameric Hemoglobin.
Chemistry, 23, 2017
11BG
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BU of 11bg by Molmil
A POTENTIAL ALLOSTERIC SUBSITE GENERATED BY DOMAIN SWAPPING IN BOVINE SEMINAL RIBONUCLEASE
Descriptor: PROTEIN (BOVINE SEMINAL RIBONUCLEASE), SULFATE ION, URIDYLYL-2'-5'-PHOSPHO-GUANOSINE
Authors:Vitagliano, L, Adinolfi, S, Sica, F, Merlino, A, Zagari, A, Mazzarella, L.
Deposit date:1999-03-11
Release date:1999-11-05
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A potential allosteric subsite generated by domain swapping in bovine seminal ribonuclease.
J.Mol.Biol., 293, 1999
8CE2
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BU of 8ce2 by Molmil
X-ray structure of the adduct formed upon reaction of a B-DNA double helical dodecamer with dirhodium tetraacetate
Descriptor: CHLORIDE ION, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Tito, G, Troisi, R, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-02-01
Release date:2023-05-31
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Dirhodium tetraacetate binding to a B-DNA double helical dodecamer probed by X-ray crystallography and mass spectrometry.
Dalton Trans, 52, 2023
8C63
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BU of 8c63 by Molmil
Crystal structure of arsenoplatin-1/B-DNA adduct obtained upon 4 h of soaking
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, PLATINUM (II) ION, ...
Authors:Troisi, R, Tito, G, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-01-11
Release date:2024-01-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
8C3B
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BU of 8c3b by Molmil
X-ray structure of RNase A upon reaction with a Ruthenium(II)-arene Complexed with Glycosylated Carbene Ligands (5)
Descriptor: (1,3-dimethyl-2~{H}-imidazol-2-yl)-oxidanyl-oxidanylidene-ruthenium, (1,3-dimethylimidazol-1-ium-2-yl)-tetrakis(oxidanyl)ruthenium, (1,3-dimethylimidazol-1-ium-2-yl)-tris(oxidanyl)ruthenium, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2022-12-23
Release date:2024-01-10
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Ruthenium(II)–Arene Complexes with Glycosylated NHC-Carbene Co-Ligands: Synthesis, Hydrolytic Behavior, and Binding to Biological Molecules
Organometallics, 42, 2023
8C39
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BU of 8c39 by Molmil
X-ray structure of HEWL upon reaction with a Ruthenium(II)-arene Complexed with Glycosylated Carbene Ligands (5)
Descriptor: CHLORIDE ION, Lysozyme, NITRATE ION, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2022-12-23
Release date:2024-01-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Ruthenium(II)–Arene Complexes with Glycosylated NHC-Carbene Co-Ligands: Synthesis, Hydrolytic Behavior, and Binding to Biological Molecules
Organometallics, 42, 2023
8C64
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BU of 8c64 by Molmil
Crystal structure of arsenoplatin-1/B-DNA adduct obtained upon 48 h of soaking
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), PLATINUM (II) ION, arsenoplatin-1
Authors:Troisi, R, Tito, G, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-01-11
Release date:2024-01-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
8C62
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BU of 8c62 by Molmil
Crystal structure of cisplatin/B-DNA adduct
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), PLATINUM (II) ION
Authors:Troisi, R, Tito, G, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2023-01-11
Release date:2024-01-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:On the mechanism of action of arsenoplatins: arsenoplatin-1 binding to a B-DNA dodecamer.
Dalton Trans, 53, 2024
5IX6
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BU of 5ix6 by Molmil
X-ray structure of Auoxo3-encapsulated horse spleen apoferritin
Descriptor: CADMIUM ION, Ferritin light chain, GOLD ION, ...
Authors:Ferraro, G, Pontillo, N, Merlino, A.
Deposit date:2016-03-23
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Gold-based drug encapsulation within a ferritin nanocage: X-ray structure and biological evaluation as a potential anticancer agent of the Auoxo3-loaded protein.
Chem.Commun.(Camb.), 52, 2016
7Z6G
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BU of 7z6g by Molmil
X-ray structure of the adduct obtained upon reaction of [Rh2(OCOCH3)(OCOCF3)3] with RNase A (2)
Descriptor: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), Rhodium, ...
Authors:Loreto, D, Merlino, A.
Deposit date:2022-03-11
Release date:2023-03-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins
Dalton Trans, 51, 2022
7Z6J
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BU of 7z6j by Molmil
X-ray structure of the adduct obtained upon reaction of [Rh2(OCOCH3)(OCOCF3)3] with HEWL
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lysozyme, Rhodium, ...
Authors:Loreto, D, Merlino, A.
Deposit date:2022-03-11
Release date:2023-03-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins
Dalton Trans, 51, 2022
7Z6D
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BU of 7z6d by Molmil
X-ray structure of the adduct obtained upon reaction of [Rh2(OCOCH3)(OCOCF3)3] with RNase A (1)
Descriptor: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), ACETATE ION, ...
Authors:Loreto, D, Merlino, A.
Deposit date:2022-03-11
Release date:2023-03-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins
Dalton Trans, 51, 2022
7QQ1
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BU of 7qq1 by Molmil
X-ray structure of the adduct obtained upon reaction of [cis-Rh2(OCOCH3)2(OCOCF3)2] with HEWL
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lysozyme, Rhodium, ...
Authors:Loreto, D, Merlino, A.
Deposit date:2022-01-05
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins.
Dalton Trans, 51, 2022
7QPZ
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BU of 7qpz by Molmil
X-ray structure of the adduct obtained upon reaction of [cis-Rh2(OCOCH3)2(OCOCF3)2] with RNase A (4)
Descriptor: Ribonuclease pancreatic, cis-bis(mi2-acetato-O, O')-(mi2-trifluoroacetato-O, ...
Authors:Loreto, D, Merlino, A.
Deposit date:2022-01-05
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins.
Dalton Trans, 51, 2022
7QPY
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BU of 7qpy by Molmil
X-ray structure of the adduct obtained upon reaction of [cis-Rh2(OCOCH3)2(OCOCF3)2] with RNase A (3)
Descriptor: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), Ribonuclease pancreatic, ...
Authors:Loreto, D, Merlino, A.
Deposit date:2022-01-05
Release date:2022-03-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins.
Dalton Trans, 51, 2022
7QPW
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BU of 7qpw by Molmil
X-ray structure of the adduct obtained upon reaction of [cis-Rh2(OCOCH3)2(OCOCF3)2] with RNase A (1)
Descriptor: (mi2-acetato-O, O')-hexaaquo-dirhodium (II), Ribonuclease pancreatic, ...
Authors:Loreto, D, Merlino, A.
Deposit date:2022-01-05
Release date:2022-03-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Reactivity of a fluorine-containing dirhodium tetracarboxylate compound with proteins.
Dalton Trans, 51, 2022
8A5N
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BU of 8a5n by Molmil
X-ray structure of human H-chain ferritin treated with SDS
Descriptor: CHLORIDE ION, FE (III) ION, Ferritin heavy chain, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2022-06-15
Release date:2023-02-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:A new and efficient procedure to load bioactive molecules within the human heavy-chain ferritin nanocage.
Front Mol Biosci, 10, 2023
3NG6
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BU of 3ng6 by Molmil
The crystal structure of hemoglobin I from Trematomus newnesi in deoxygenated state obtained through an oxidation/reduction cycle in which potassium hexacyanoferrate and sodium dithionite were alternatively added
Descriptor: Hemoglobin subunit alpha-1, Hemoglobin subunit beta-1/2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Vergara, A, Vitagliano, L, Merlino, A, Sica, F, Marino, K, Mazzarella, L.
Deposit date:2010-06-11
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An order-disorder transition plays a role in switching off the root effect in fish hemoglobins.
J.Biol.Chem., 285, 2010
3NFE
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BU of 3nfe by Molmil
The crystal structure of hemoglobin I from trematomus newnesi in deoxygenated state
Descriptor: Hemoglobin subunit alpha-1, Hemoglobin subunit beta-1/2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Vergara, A, Vitagliano, L, Merlino, A, Sica, F, Marino, K, Mazzarella, L.
Deposit date:2010-06-10
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:An order-disorder transition plays a role in switching off the root effect in fish hemoglobins.
J.Biol.Chem., 285, 2010
8AJ4
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BU of 8aj4 by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(malt)2] (Structure A')
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8,8-bis($l^{1}-oxidanyl)-2,2'-dimethyl-8,8'-spirobi[3$l^{4},7,9-trioxa-8$l^{6}-vanadabicyclo[4.3.0]nona-1(6),2,4-triene], Lysozyme, ...
Authors:Paolillo, M, Merlino, A, Ferraro, G.
Deposit date:2022-07-27
Release date:2022-11-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Multiple and Variable Binding of Pharmacologically Active Bis(maltolato)oxidovanadium(IV) to Lysozyme.
Inorg.Chem., 61, 2022
8AJ3
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BU of 8aj3 by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(malt)2] (Structure A)
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8,8,8,8-tetrakis($l^{1}-oxidanyl)-2-methyl-3,7,9-trioxa-8$l^{6}-vanadabicyclo[4.3.0]nona-1,5-diene, 8,8-bis($l^{1}-oxidanyl)-2,2'-dimethyl-8,8'-spirobi[3$l^{4},7,9-trioxa-8$l^{6}-vanadabicyclo[4.3.0]nona-1(6),2,4-triene], ...
Authors:Paolillo, M, Merlino, A, Ferraro, G.
Deposit date:2022-07-27
Release date:2022-11-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Multiple and Variable Binding of Pharmacologically Active Bis(maltolato)oxidovanadium(IV) to Lysozyme.
Inorg.Chem., 61, 2022
8AJ5
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BU of 8aj5 by Molmil
X-ray structure of lysozyme obtained upon reaction with [VIVO(malt)2] (Structure B)
Descriptor: ACETATE ION, Lysozyme, NITRATE ION, ...
Authors:Paolillo, M, Merlino, A, Ferraro, G.
Deposit date:2022-07-27
Release date:2022-11-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Multiple and Variable Binding of Pharmacologically Active Bis(maltolato)oxidovanadium(IV) to Lysozyme.
Inorg.Chem., 61, 2022
7P8R
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BU of 7p8r by Molmil
X-ray structure of the adduct of a vanadium picolinate complex with RNase A at pH 5.1
Descriptor: Ribonuclease pancreatic, SULFATE ION, hydroxy(oxo)bis(pyridine-2-carboxylato-kappa~2~N,O)vanadium(3+)
Authors:Ferraro, G, Merlino, A.
Deposit date:2021-07-23
Release date:2021-12-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Spectroscopic/Computational Characterization and the X-ray Structure of the Adduct of the V IV O-Picolinato Complex with RNase A.
Inorg.Chem., 60, 2021
8BRC
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BU of 8brc by Molmil
Crystal structure of the adduct between human serum transferrin and cisplatin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AMMONIA, FE (III) ION, ...
Authors:Troisi, R, Galardo, F, Ferraro, G, Sica, F, Merlino, A.
Deposit date:2022-11-22
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Cisplatin Binding to Human Serum Transferrin: A Crystallographic Study.
Inorg.Chem., 62, 2023
6SET
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BU of 6set by Molmil
X-ray structure of the gold/lysozyme adduct formed upon 3 days exposure of protein crystals to compound 1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Ferraro, G, Giorgio, A, Merlino, A.
Deposit date:2019-07-30
Release date:2019-09-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein-mediated disproportionation of Au(i): insights from the structures of adducts of Au(iii) compounds bearing N,N-pyridylbenzimidazole derivatives with lysozyme.
Dalton Trans, 48, 2019

226707

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