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PDB: 138 results

7MHI
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Crystal Structure of SARS-CoV-2 Main Protease (Mpro) at 298 K
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
7MHQ
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Ensemble refinement structure of SARS-CoV-2 main protease (Mpro) at 310 K
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9601 Å)
Cite:The temperature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro )
Iucrj, 9, 2022
7MHH
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Crystal Structure of SARS-CoV-2 Main Protease (Mpro) at 277 K
Descriptor: 3C-like proteinase, DIMETHYL SULFOXIDE, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1908 Å)
Cite:The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
1W3O
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Crystal structure of NimA from D. radiodurans
Descriptor: ACETATE ION, NIMA-RELATED PROTEIN, PYRUVIC ACID
Authors:Leiros, H.-K.S, Kozielski-Stuhrmann, S, Kapp, U, Terradot, L, Leonard, G.A, McSweeney, S.M.
Deposit date:2004-07-17
Release date:2004-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis of 5-Nitroimidazole Antibiotic Resistance: The Crystal Structure of Nima from Deinococcus Radiodurans
J.Biol.Chem., 279, 2004
2YEU
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Structural and functional insights of DR2231 protein, the MazG-like nucleoside triphosphate pyrophosphohydrolase from Deinococcus radiodurans, complex with Gd
Descriptor: DR2231, GADOLINIUM ATOM, GLYCEROL, ...
Authors:Goncalves, A.M.D, de Sanctis, D, McSweeney, S.M.
Deposit date:2011-03-30
Release date:2011-07-06
Last modified:2011-09-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans.
J.Biol.Chem., 286, 2011
1O7U
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Radiation induced tryparedoxin-I
Descriptor: TRYPAREDOXIN
Authors:Alphey, M.S, Bond, C.S, McSweeney, S.M, Hunter, W.N.
Deposit date:2002-11-14
Release date:2003-04-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Tryparedoxins from Crithidia Fasciculata and Trypanosoma Brucei: Photoreduction of the Redox Disulfide Using Synchrotron Radiation and Evidence for a Conformational Switch Implicated in Function
J.Biol.Chem., 278, 2003
2VRN
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The structure of the stress response protein DR1199 from Deinococcus radiodurans: a member of the DJ-1 superfamily
Descriptor: MAGNESIUM ION, PROTEASE I
Authors:Fioravanti, E, Dura, M.A, Lascoux, D, Micossi, E, McSweeney, S.
Deposit date:2008-04-09
Release date:2008-10-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of the stress response protein DR1199 from Deinococcus radiodurans: a member of the DJ-1 superfamily.
Biochemistry, 47, 2008
7MHP
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Ensemble refinement structure of SARS-CoV-2 main protease (Mpro) at 298 K at high humidity
Descriptor: 3C-like proteinase, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.0005 Å)
Cite:The temperature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro )
Iucrj, 9, 2022
1W3P
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NimA from D. radiodurans with a His71-Pyruvate residue
Descriptor: ACETATE ION, NIMA-RELATED PROTEIN, PYRUVIC ACID
Authors:Leiros, H.-K.S, Kozielski-Stuhrmann, S, Kapp, U, Terradot, L, Leonard, G.A, McSweeney, S.M.
Deposit date:2004-07-17
Release date:2004-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of 5-Nitroimidazole Antibiotic Resistance: The Crystal Structure of Nima from Deinococcus Radiodurans
J.Biol.Chem., 279, 2004
1W3R
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NimA from D. radiodurans with Metronidazole and Pyruvate
Descriptor: ACETATE ION, Metronidazole, NIMA-RELATED PROTEIN, ...
Authors:Leiros, H.-K.S, Kozielski-Stuhrmann, S, Kapp, U, Terradot, L, Leonard, G.A, McSweeney, S.M.
Deposit date:2004-07-17
Release date:2004-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of 5-Nitroimidazole Antibiotic Resistance: The Crystal Structure of Nima from Deinococcus Radiodurans
J.Biol.Chem., 279, 2004
1W3Q
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NimA from D. radiodurans with covalenly bound lactate
Descriptor: ACETATE ION, LACTIC ACID, NIMA-RELATED PROTEIN
Authors:Leiros, H.-K.S, Kozielski-Stuhrmann, S, Kapp, U, Terradot, L, Leonard, G.A, Mcsweeney, S.M.
Deposit date:2004-07-17
Release date:2004-10-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural Basis of 5-Nitroimidazole Antibiotic Resistance: The Crystal Structure of Nima from Deinococcus Radiodurans
J.Biol.Chem., 279, 2004
2YF3
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BU of 2yf3 by Molmil
Crystal structure of DR2231, the MazG-like protein from Deinococcus radiodurans, complex with manganese
Descriptor: GLYCEROL, MANGANESE (II) ION, MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE, ...
Authors:Goncalves, A.M.D, deSanctis, D, McSweeney, S.M.
Deposit date:2011-04-01
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans.
J.Biol.Chem., 286, 2011
7MHJ
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BU of 7mhj by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) at 298 K and High Humidity
Descriptor: 3C-like proteinase, ZINC ION
Authors:Ebrahim, A, Riley, B.T, Kumaran, D, Andi, B, Fuchs, M.R, McSweeney, S, Keedy, D.A.
Deposit date:2021-04-15
Release date:2021-05-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.0005 Å)
Cite:The tem-per-ature-dependent conformational ensemble of SARS-CoV-2 main protease (M pro ).
Iucrj, 9, 2022
2YF4
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Crystal structure of DR2231, the MazG-like protein from Deinococcus radiodurans, Apo structure
Descriptor: GLYCEROL, MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE, SULFATE ION
Authors:Goncalves, A.M.D, deSanctis, D, McSweeney, S.M.
Deposit date:2011-04-01
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans.
J.Biol.Chem., 286, 2011
2YFC
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BU of 2yfc by Molmil
STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH Mn and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, GLYCEROL, MANGANESE (II) ION, ...
Authors:Goncalves, A.M.D, De Sanctis, D, Mcsweeney, S.M.
Deposit date:2011-04-05
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans.
J.Biol.Chem., 286, 2011
2YFD
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BU of 2yfd by Molmil
STRUCTURAL AND FUNCTIONAL INSIGHTS OF DR2231 PROTEIN, THE MAZG-LIKE NUCLEOSIDE TRIPHOSPHATE PYROPHOSPHOHYDROLASE FROM DEINOCOCCUS RADIODURANS, COMPLEXED WITH Mg and dUMP
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, ACETATE ION, CHLORIDE ION, ...
Authors:Goncalves, A.M.D, De Sanctis, D, Mcsweeney, S.M.
Deposit date:2011-04-05
Release date:2011-07-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.767 Å)
Cite:Structural and Functional Insights Into Dr2231 Protein, the Mazg-Like Nucleoside Triphosphate Pyrophosphohydrolase from Deinococcus Radiodurans.
J.Biol.Chem., 286, 2011
1V0U
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BU of 1v0u by Molmil
Phospholipase D from Streptomyces sp. strain PMF soaked with the product glycerophosphate.
Descriptor: PHOSPHITE ION, PHOSPHOLIPASE D
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-02
Release date:2004-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
1V0S
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BU of 1v0s by Molmil
Uninhibited form of Phospholipase D from Streptomyces sp. strain PMF
Descriptor: PHOSPHOLIPASE D
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-01
Release date:2004-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
1UTH
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BU of 1uth by Molmil
DntR from Burkholderia sp. strain DNT in complex with Thiocyanate
Descriptor: LYSR-TYPE REGULATORY PROTEIN, THIOCYANATE ION
Authors:Smirnova, I.A, Dian, C, Leonard, G.A, McSweeney, S, Birse, D, Brzezinski, P.
Deposit date:2003-12-09
Release date:2004-07-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Development of a Bacterial Biosensor for Nitrotoluenes: The Crystal Structure of the Transcriptional Regulator Dntr
J.Mol.Biol., 340, 2004
1V0W
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Phospholipase D from Streptomyces sp. strain PMF soaked with the substrate dibutyrylphosphatidylcholine.
Descriptor: PHOSPHITE ION, PHOSPHOLIPASE D
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-02
Release date:2004-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
1V0T
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BU of 1v0t by Molmil
Phospholipase D from Streptomyces sp. strain PMF soaked with the product glycerophosphate
Descriptor: PHOSPHITE ION, PHOSPHOLIPASE D
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-02
Release date:2004-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
1V0R
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BU of 1v0r by Molmil
Tungstate-inhibited phospholipase D from Streptomyces sp. strain PMF
Descriptor: PHOSPHOLIPASE D, TUNGSTATE(VI) ION
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-01
Release date:2004-06-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
1V0V
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BU of 1v0v by Molmil
Phospholipase D from Streptomyces sp. strain PMF soaked with the substrate dibutyrylphosphatidylcholine.
Descriptor: PHOSPHITE ION, PHOSPHOLIPASE D
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-02
Release date:2004-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
1V0Y
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Phospholipase D from Streptomyces sp. strain PMF soaked with the substrate dibutyrylphosphatidylcholine.
Descriptor: 2-(BUTYRYLOXY)-1-{[(TETRAHYDROXYPHOSPHORANYL)OXY]METHYL}ETHYL BUTYRATE, PHOSPHOLIPASE D
Authors:Leiros, I, McSweeney, S, Hough, E.
Deposit date:2004-04-02
Release date:2004-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:The Reaction Mechanism of Phospholipase D from Streptomyces Sp. Strain Pmf. Snapshots Along the Reaction Pathway Reveal a Pentacoordinate Reaction Intermediate and an Unexpected Final Product
J.Mol.Biol., 339, 2004
2YG8
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BU of 2yg8 by Molmil
Structure of an unusual 3-Methyladenine DNA Glycosylase II (Alka) from Deinococcus radiodurans
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, DNA-3-methyladenine glycosidase II, ...
Authors:Moe, E, Hall, D.R, Leiros, I, Talstad, V, Timmins, J, McSweeney, S.
Deposit date:2011-04-11
Release date:2011-04-20
Last modified:2018-12-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-function studies of an unusual 3-methyladenine DNA glycosylase II (AlkA) from Deinococcus radiodurans.
Acta Crystallogr. D Biol. Crystallogr., 68, 2012

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数据于2024-07-24公开中

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