2D0B
 
 | | Crystal structure of Bst-RNase HIII in complex with Mg2+ | | 分子名称: | MAGNESIUM ION, ribonuclease HIII | | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2005-07-31 | | 公開日 | 2006-07-18 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus
J.Mol.Biol., 356, 2006
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1WN7
 | | Crystal structure of archaeal family B DNA polymerase mutant | | 分子名称: | Family B DNA Polymerase, GLYCEROL, NICKEL (II) ION | | 著者 | Kuroita, T, Matsumura, H, Yokota, N, Hashimoto, H, Imanaka, T, Inoue, T, Kai, Y. | | 登録日 | 2004-07-28 | | 公開日 | 2005-08-02 | | 最終更新日 | 2024-10-16 | | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | | 主引用文献 | Structural Mechanism for Coordination of Proofreading and Polymerase Activities in Archaeal DNA Polymerases
J.Mol.Biol., 351, 2005
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1WSG
 | | Co-crystal structure of E.coli RNase HI active site mutant (E48A/D134N*) with Mn2+ | | 分子名称: | MANGANESE (II) ION, Ribonuclease HI | | 著者 | Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S. | | 登録日 | 2004-11-05 | | 公開日 | 2005-02-08 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Identification of Single Mn(2+) Binding Sites Required for Activation of the Mutant Proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray Crystallography
J.Mol.Biol., 345, 2005
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2DF5
 | | Crystal Structure of Pf-PCP(1-204)-C | | 分子名称: | Pyrrolidone-carboxylate peptidase | | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | | 登録日 | 2006-02-24 | | 公開日 | 2007-03-06 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Conformational contagion in a protein: structural properties of a chameleon sequence
Proteins, 68, 2007
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2DFI
 | | Crystal structure of Pf-MAP(1-292)-C | | 分子名称: | COBALT (II) ION, Methionine aminopeptidase | | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | | 登録日 | 2006-03-01 | | 公開日 | 2007-03-06 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Conformational contagion in a protein: Structural properties of a chameleon sequence
Proteins, 68, 2007
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5AVH
 | | The 0.90 angstrom structure (I222) of glucose isomerase crystallized in high-strength agarose hydrogel | | 分子名称: | Xylose isomerase | | 著者 | Sugiyama, S, Shimizu, N, Maruyama, N, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H. | | 登録日 | 2015-06-16 | | 公開日 | 2015-07-08 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (0.9 Å) | | 主引用文献 | Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
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5AVN
 | | The 1.03 angstrom structure (P212121) of glucose isomerase crystallized in high-strength agarose hydrogel | | 分子名称: | CALCIUM ION, MANGANESE (II) ION, SULFATE ION, ... | | 著者 | Sugiyama, S, Shimizu, N, Maruyama, N, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H. | | 登録日 | 2015-06-23 | | 公開日 | 2015-07-08 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.03 Å) | | 主引用文献 | Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
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2D0A
 | | Crystal structure of Bst-RNase HIII | | 分子名称: | ribonuclease HIII | | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2005-07-31 | | 公開日 | 2006-07-18 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Crystal structure and structure-based mutational analyses of RNase HIII from Bacillus stearothermophilus: a new type 2 RNase H with TBP-like substrate-binding domain at the N terminus
J.Mol.Biol., 356, 2006
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2E1P
 | | Crystal structure of pro-Tk-subtilisin | | 分子名称: | CALCIUM ION, Tk-subtilisin | | 著者 | Tanaka, S, Saito, K, Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2006-10-27 | | 公開日 | 2007-01-16 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Crystal structure of unautoprocessed precursor of subtilisin from a hyperthermophilic archaeon: evidence for Ca2+-induced folding
J.Biol.Chem., 282, 2007
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5AVD
 | | The 0.86 angstrom structure of elastase crystallized in high-strength agarose hydrogel | | 分子名称: | Chymotrypsin-like elastase family member 1, SULFATE ION | | 著者 | Sugiyama, S, Shimizu, N, Maruyama, M, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H. | | 登録日 | 2015-06-15 | | 公開日 | 2015-07-08 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (0.86 Å) | | 主引用文献 | Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
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5AVG
 | | The 0.95 angstrom structure of thaumatin crystallized in high-strength agarose hydrogel | | 分子名称: | Thaumatin-1 | | 著者 | Sugiyama, S, Shimizu, N, Maruyama, M, Sazaki, G, Hirose, M, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H. | | 登録日 | 2015-06-16 | | 公開日 | 2015-07-08 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (0.95 Å) | | 主引用文献 | Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
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1X1P
 | | Crystal structure of Tk-RNase HII(1-197)-A(28-42) | | 分子名称: | Ribonuclease HII | | 著者 | Takano, K, Endo, S, Mukaiyama, A, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | | 登録日 | 2005-04-11 | | 公開日 | 2006-01-17 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | Structure of amyloid beta fragments in aqueous environments
Febs J., 273, 2006
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4YSD
 | | Room temperature structure of copper nitrite reductase from Geobacillus thermodenitrificans | | 分子名称: | ACETIC ACID, COPPER (II) ION, Nitrite reductase | | 著者 | Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. | | 登録日 | 2015-03-17 | | 公開日 | 2016-02-24 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | | 主引用文献 | Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
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4YSQ
 | | Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 8.38 MGy | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... | | 著者 | Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. | | 登録日 | 2015-03-17 | | 公開日 | 2016-02-24 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
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1WSE
 | | Co-crystal structure of E.coli RNase HI active site mutant (E48A*) with Mn2+ | | 分子名称: | MANGANESE (II) ION, Ribonuclease HI | | 著者 | Tsunaka, Y, Takano, K, Matsumura, H, Yamagata, Y, Kanaya, S. | | 登録日 | 2004-11-05 | | 公開日 | 2005-02-08 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Identification of Single Mn(2+) Binding Sites Required for Activation of the Mutant Proteins of E.coli RNase HI at Glu48 and/or Asp134 by X-ray Crystallography
J.Mol.Biol., 345, 2005
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1X0M
 | | a Human Kynurenine Aminotransferase II Homologue from Pyrococcus horikoshii OT3 | | 分子名称: | Aminotransferase II Homologue | | 著者 | Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2005-03-24 | | 公開日 | 2005-04-12 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Crystal structure of a human kynurenine aminotransferase II homologue from Pyrococcus horikoshii OT3 at 2.20 A resolution
Proteins, 61, 2005
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4YSP
 | | Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 8.32 MGy | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... | | 著者 | Fukuda, Y, Tse, K.M, Suzuki, M, Diedrichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. | | 登録日 | 2015-03-17 | | 公開日 | 2016-02-24 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.34 Å) | | 主引用文献 | Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
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4YSR
 | | Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 16.6 MGy | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... | | 著者 | Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. | | 登録日 | 2015-03-17 | | 公開日 | 2016-02-24 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.34 Å) | | 主引用文献 | Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
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2DFH
 | | Crystal structure of Tk-RNase HII(1-212)-C | | 分子名称: | Ribonuclease HII | | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | | 登録日 | 2006-03-01 | | 公開日 | 2007-03-06 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.27 Å) | | 主引用文献 | Conformational contagion in a protein: Structural properties of a chameleon sequence
Proteins, 68, 2007
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4YSS
 | | Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 16.7 MGy | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... | | 著者 | Fukuda, Y, Tse, K.M, Suzuki, M, Diedrichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. | | 登録日 | 2015-03-17 | | 公開日 | 2016-02-24 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
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2DFE
 | | Crystal structure of Tk-RNase HII(1-200)-C | | 分子名称: | Ribonuclease HII | | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | | 登録日 | 2006-03-01 | | 公開日 | 2007-03-06 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Conformational contagion in a protein: Structural properties of a chameleon sequence
Proteins, 68, 2007
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2DFF
 | | Crystal structure of Tk-RNase HII(1-204)-C | | 分子名称: | Ribonuclease HII | | 著者 | Katagiri, Y, Takano, K, Chon, H, Matsumura, H, Koga, Y, Kanaya, S. | | 登録日 | 2006-03-01 | | 公開日 | 2007-03-06 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Conformational contagion in a protein: Structural properties of a chameleon sequence
Proteins, 68, 2007
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4YSO
 | | Copper nitrite reductase from Geobacillus thermodenitrificans - 0.064 MGy | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... | | 著者 | Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. | | 登録日 | 2015-03-17 | | 公開日 | 2016-02-24 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
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4YSA
 | | Completely oxidized structure of copper nitrite reductase from Geobacillus thermodenitrificans | | 分子名称: | COPPER (II) ION, Nitrite reductase, SODIUM ION | | 著者 | Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. | | 登録日 | 2015-03-17 | | 公開日 | 2016-02-24 | | 最終更新日 | 2023-09-06 | | 実験手法 | X-RAY DIFFRACTION (1.43 Å) | | 主引用文献 | Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
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4YST
 | | Structure of copper nitrite reductase from Geobacillus thermodenitrificans - 24.9 MGy | | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Nitrite reductase, ... | | 著者 | Fukuda, Y, Tse, K.M, Suzuki, M, Diederichs, K, Hirata, K, Nakane, T, Sugahara, M, Nango, E, Tono, K, Joti, Y, Kameshima, T, Song, C, Hatsui, T, Yabashi, M, Nureki, O, Matsumura, H, Inoue, T, Iwata, S, Mizohata, E. | | 登録日 | 2015-03-17 | | 公開日 | 2016-02-24 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (1.34 Å) | | 主引用文献 | Redox-coupled structural changes in nitrite reductase revealed by serial femtosecond and microfocus crystallography
J.Biochem., 159, 2016
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