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PDB: 286 results

6KO9
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BU of 6ko9 by Molmil
Crystal structure of the Gefitinib Intermediate 1 bound RamR determined with XtaLAB Synergy
Descriptor: 4-[(3-chloranyl-4-fluoranyl-phenyl)amino]-7-methoxy-quinazolin-6-ol, Putative regulatory protein, SULFATE ION
Authors:Matsumoto, T, Nakashima, R, Yamano, A, Nishino, K.
Deposit date:2019-08-08
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Development of a structure determination method using a multidrug-resistance regulator protein as a framework.
Biochem.Biophys.Res.Commun., 518, 2019
6KO8
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BU of 6ko8 by Molmil
Crystal structure of the Cholic acid bound RamR determined with XtaLAB Synergy
Descriptor: CHOLIC ACID, Putative regulatory protein, SULFATE ION
Authors:Matsumoto, T, Nakashima, R, Yamano, A, Nishino, K.
Deposit date:2019-08-08
Release date:2019-10-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Development of a structure determination method using a multidrug-resistance regulator protein as a framework.
Biochem.Biophys.Res.Commun., 518, 2019
3I9T
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BU of 3i9t by Molmil
Crystal structure of the rat heme oxygenase (HO-1) in complex with heme binding dithiothreitol (DTT)
Descriptor: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Matsui, T, Unno, M, Ikeda-Saito, M.
Deposit date:2009-07-13
Release date:2010-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase.
Inorg.Chem., 49, 2010
3I9U
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BU of 3i9u by Molmil
Crystal structure of the rat heme oxygenase (HO-1) in complex with heme binding dithioerythritol (DTE)
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Matsui, T, Unno, M, Ikeda-Saito, M.
Deposit date:2009-07-13
Release date:2010-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Dioxygen activation for the self-degradation of heme: reaction mechanism and regulation of heme oxygenase.
Inorg.Chem., 49, 2010
5GLO
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BU of 5glo by Molmil
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose, calcium-free form
Descriptor: ACETATE ION, Glycoside hydrolase family 43, SODIUM ION, ...
Authors:Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K.
Deposit date:2016-07-12
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium.
J. Biochem., 162, 2017
5GLQ
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BU of 5glq by Molmil
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose and xylotriose, calcium-free form
Descriptor: Glycoside hydrolase family 43, SODIUM ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
Authors:Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K.
Deposit date:2016-07-12
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium.
J. Biochem., 162, 2017
5GLL
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BU of 5gll by Molmil
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome, calcium-bound form
Descriptor: ACETATE ION, CALCIUM ION, GLYCEROL, ...
Authors:Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K.
Deposit date:2016-07-12
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium.
J. Biochem., 162, 2017
5GLN
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BU of 5gln by Molmil
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with xylotriose, calcium-bound form
Descriptor: ACETATE ION, CALCIUM ION, Glycoside hydrolase family 43, ...
Authors:Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K.
Deposit date:2016-07-12
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium.
J. Biochem., 162, 2017
5GLP
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BU of 5glp by Molmil
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose, calcium-bound form
Descriptor: ACETATE ION, CALCIUM ION, Glycoside hydrolase family 43, ...
Authors:Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K.
Deposit date:2016-07-12
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium.
J. Biochem., 162, 2017
5GLM
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BU of 5glm by Molmil
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compost microbial metagenome in complex with xylotriose, calcium-free form.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, Glycoside hydrolase family 43, ...
Authors:Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K.
Deposit date:2016-07-12
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium.
J. Biochem., 162, 2017
5GLK
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BU of 5glk by Molmil
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compost microbial metagenome, calcium-free form.
Descriptor: ACETATE ION, GLYCEROL, Glycoside hydrolase family 43, ...
Authors:Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K.
Deposit date:2016-07-12
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium.
J. Biochem., 162, 2017
5GLR
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BU of 5glr by Molmil
Crystal structure of CoXyl43, GH43 beta-xylosidase/alpha-arabinofuranosidase from a compostmicrobial metagenome in complex with l-arabinose and xylotriose, calcium-bound form
Descriptor: CALCIUM ION, Glycoside hydrolase family 43, SODIUM ION, ...
Authors:Matsuzawa, T, Kishine, N, Fujimoto, Z, Yaoi, K.
Deposit date:2016-07-12
Release date:2017-03-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of metagenomic beta-xylosidase/ alpha-l-arabinofuranosidase activated by calcium.
J. Biochem., 162, 2017
2Z9S
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BU of 2z9s by Molmil
Crystal Structure Analysis of rat HBP23/Peroxiredoxin I, Cys52Ser mutant
Descriptor: Peroxiredoxin-1
Authors:Matsumura, T, Okamoto, K, Nishino, T, Abe, Y.
Deposit date:2007-09-25
Release date:2007-11-20
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Dimer-Oligomer Interconversion of Wild-type and Mutant Rat 2-Cys Peroxiredoxin: DISULFIDE FORMATION AT DIMER-DIMER INTERFACES IS NOT ESSENTIAL FOR DECAMERIZATION
J.Biol.Chem., 283, 2008
2DI2
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BU of 2di2 by Molmil
NMR structure of the HIV-2 nucleocapsid protein
Descriptor: Nucleocapsid protein p7, ZINC ION
Authors:Matsui, T, Kodera, Y, Endoh, H, Miyauchi, E, Komatsu, H, Sato, K, Tanaka, T, Kohno, T, Maeda, T.
Deposit date:2006-03-27
Release date:2007-03-13
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:RNA Recognition Mechanism of the Minimal Active Domain of the Human Immunodeficiency Virus Type-2 Nucleocapsid Protein
J.Biochem.(Tokyo), 141, 2007
1WNV
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BU of 1wnv by Molmil
D136A mutant of Heme Oxygenase from Corynebacterium diphtheriae (HmuO)
Descriptor: Heme oxygenase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Matsui, T, Unno, M, Ikeda-Saito, M.
Deposit date:2004-08-10
Release date:2004-11-09
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Roles of Distal Asp in Heme Oxygenase from Corynebacterium diphtheriae, HmuO: A WATER-DRIVEN OXYGEN ACTIVATION MECHANISM
J.Biol.Chem., 280, 2005
3ALO
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BU of 3alo by Molmil
Crystal structure of human non-phosphorylated MKK4 kinase domain ternary complex with AMP-PNP and p38 peptide
Descriptor: Dual specificity mitogen-activated protein kinase kinase 4, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Matsumoto, T, Kinoshita, T, Kirii, Y, Yokota, K, Hamada, K, Tada, T.
Deposit date:2010-08-04
Release date:2010-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of MKK4 kinase domain reveal that substrate peptide binds to an allosteric site and induces an auto-inhibition state
Biochem.Biophys.Res.Commun., 400, 2010
2E1X
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BU of 2e1x by Molmil
NMR structure of the HIV-2 nucleocapsid protein
Descriptor: Gag-Pol polyprotein (Pr160Gag-Pol), ZINC ION
Authors:Matsui, T, Kodera, Y, Miyauchi, E, Tanaka, H, Endoh, H, Komatsu, H, Tanaka, T, Kohno, T, Maeda, T.
Deposit date:2006-11-03
Release date:2007-06-05
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Structural role of the secondary active domain of HIV-2 NCp8 in multi-functionality
Biochem.Biophys.Res.Commun., 358, 2007
2EC7
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BU of 2ec7 by Molmil
Solution Structure of Human Immunodificiency Virus Type-2 Nucleocapsid Protein
Descriptor: Gag polyprotein (Pr55Gag), ZINC ION
Authors:Matsui, T, Kodera, Y, Tanaka, T, Endoh, H, Tanaka, H, Miyauchi, E, Komatsu, H, Kohno, T, Maeda, T.
Deposit date:2007-02-10
Release date:2008-02-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The RNA recognition mechanism of human immunodeficiency virus (HIV) type 2 NCp8 is different from that of HIV-1 NCp7
Biochemistry, 48, 2009
3ALN
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BU of 3aln by Molmil
Crystal Structure of human non-phosphorylated MKK4 kinase domain complexed with AMP-PNP
Descriptor: Dual specificity mitogen-activated protein kinase kinase 4, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Matsumoto, T, Kinoshita, T, Kirii, Y, Yokota, K, Hamada, K, Tada, T.
Deposit date:2010-08-04
Release date:2010-10-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of MKK4 kinase domain reveal that substrate peptide binds to an allosteric site and induces an auto-inhibition state
Biochem.Biophys.Res.Commun., 400, 2010
3APB
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BU of 3apb by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with iodide
Descriptor: Galectin-8, IODIDE ION
Authors:Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
Deposit date:2010-10-14
Release date:2011-01-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
To be Published
3AP7
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BU of 3ap7 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose sialic acid
Descriptor: CHLORIDE ION, Galectin-8, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
Deposit date:2010-10-12
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011
3AP5
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BU of 3ap5 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain
Descriptor: Galectin-8
Authors:Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
Deposit date:2010-10-11
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011
3AP6
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BU of 3ap6 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose 3'-sulfate
Descriptor: Galectin-8, SULFATE ION, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
Deposit date:2010-10-12
Release date:2011-01-26
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011
3AP4
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BU of 3ap4 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose
Descriptor: Galectin-8, beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
Deposit date:2010-10-11
Release date:2011-01-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011
3AP9
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BU of 3ap9 by Molmil
Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with Lacto-N-fucopentaose III
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Galectin-8, ...
Authors:Matsuzaka, T, Ideo, H, Yamashita, K, Nonaka, T.
Deposit date:2010-10-12
Release date:2011-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Galectin-8-N-domain recognition mechanism for sialylated and sulfated glycans
J.Biol.Chem., 286, 2011

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数据于2024-08-14公开中

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