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PDB: 402 件

5DLS
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BU of 5dls by Molmil
Identification of Novel, in vivo Active Chk1 Inhibitors Utilizing Structure Guided Drug Design
分子名称: 1-benzyl-N-(5-{5-[3-(dimethylamino)-2,2-dimethylpropoxy]-1H-indol-2-yl}-6-oxo-1,6-dihydropyridin-3-yl)-1H-pyrazole-4-carboxamide, SULFATE ION, Serine/threonine-protein kinase Chk1
著者Massey, A.J, Stokes, S, Browne, H, Foloppe, N, Fiumana, A, Scrace, S, Fallowfield, M, Bedford, S, Webb, P, Baker, L.M, Christie, M, Drysdale, M.J, Wood, M.
登録日2015-09-07
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Identification of novel, in vivo active Chk1 inhibitors utilizing structure guided drug design.
Oncotarget, 6, 2015
8CKF
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BU of 8ckf by Molmil
Crystal Structure of the first bromodomain of human BRD4 L94C variant in complex with racemic 3,5-dimethylisoxazol ligand
分子名称: 3-(3,5-dimethyl-1,2-oxazol-4-yl)-5-[(~{R})-oxidanyl(pyridin-3-yl)methyl]phenol, 3-(3,5-dimethyl-1,2-oxazol-4-yl)-5-[(~{S})-oxidanyl(pyridin-3-yl)methyl]phenol, Bromodomain-containing protein 4
著者Thomas, A.M, McDonough, M.A, Schiedel, M, Conway, S.J.
登録日2023-02-15
公開日2023-08-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Mutate and Conjugate: A Method to Enable Rapid In-Cell Target Validation.
Acs Chem.Biol., 18, 2023
5JHC
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BU of 5jhc by Molmil
Crystal structure of the self-assembled propeptides from Ape1
分子名称: Vacuolar aminopeptidase 1
著者Yamasaki, A, Noda, N.N.
登録日2016-04-20
公開日2016-06-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural Basis for Receptor-Mediated Selective Autophagy of Aminopeptidase I Aggregates
Cell Rep, 16, 2016
6RZ1
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BU of 6rz1 by Molmil
Winter flounder 3 in SDS micelles
分子名称: Pleurocidin-like peptide WF3
著者Mason, A.J, Clarke, M.
登録日2019-06-12
公開日2020-07-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure of winter flounder AMP 3
To Be Published
6RYQ
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BU of 6ryq by Molmil
Winter flounder 1a in SDS micelles
分子名称: Pleurocidin-like prepropolypeptide
著者Mason, A.J, Clarke, M.
登録日2019-06-11
公開日2020-07-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Winter flounder 1a in SDS micelles
To Be Published
6RZC
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BU of 6rzc by Molmil
Winter flounder 4 in SDS micelles
分子名称: Pleurocidin-like peptide WF4
著者Mason, A.J, Clarke, M.
登録日2019-06-13
公開日2020-07-15
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Winter flounder 4 in SDS micelles
To Be Published
7YO8
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BU of 7yo8 by Molmil
Crystal structure of fission yeast Hfl1 LIR fused to human GABARAPL2
分子名称: Transmembrane protein 184 homolog C30D11.06c,Gamma-aminobutyric acid receptor-associated protein-like 2
著者Yamasaki, A, Noda, N.N.
登録日2022-08-01
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.805 Å)
主引用文献Development of new tools to study membrane-anchored mammalian Atg8 proteins.
Autophagy, 19, 2023
7YO9
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BU of 7yo9 by Molmil
Crystal structure of fusion protein of human TP53INP2 LIR and human GABARAP
分子名称: ISOPROPYL ALCOHOL, PHOSPHATE ION, Tumor protein p53-inducible nuclear protein 2,Gamma-aminobutyric acid receptor-associated protein
著者Yamasaki, A, Noda, N.N.
登録日2022-08-01
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Development of new tools to study membrane-anchored mammalian Atg8 proteins.
Autophagy, 19, 2023
7BRQ
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BU of 7brq by Molmil
Crystal structure of human FAM134B LIR fused to human GABARAP
分子名称: GLYCEROL, Reticulophagy regulator 1,Gamma-aminobutyric acid receptor-associated protein
著者Yamasaki, A, Noda, N.N.
登録日2020-03-29
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.404 Å)
主引用文献Super-assembly of ER-phagy receptor Atg40 induces local ER remodeling at contacts with forming autophagosomal membranes.
Nat Commun, 11, 2020
7BRT
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BU of 7brt by Molmil
Crystal structure of Sec62 LIR fused to GABARAP
分子名称: Translocation protein SEC62,Gamma-aminobutyric acid receptor-associated protein
著者Yamasaki, A, Noda, N.N.
登録日2020-03-30
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Super-assembly of ER-phagy receptor Atg40 induces local ER remodeling at contacts with forming autophagosomal membranes.
Nat Commun, 11, 2020
7BRU
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BU of 7bru by Molmil
Crystal structure of human RTN3 LIR fused to human GABARAP
分子名称: PHOSPHATE ION, Reticulon-3,Gamma-aminobutyric acid receptor-associated protein
著者Yamasaki, A, Noda, N.N.
登録日2020-03-30
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.149 Å)
主引用文献Super-assembly of ER-phagy receptor Atg40 induces local ER remodeling at contacts with forming autophagosomal membranes.
Nat Commun, 11, 2020
7BRN
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BU of 7brn by Molmil
Crystal structure of Atg40 AIM fused to Atg8
分子名称: 1,2-ETHANEDIOL, Autophagy-related protein 40,Autophagy-related protein 8, L-EPINEPHRINE
著者Yamasaki, A, Noda, N.N.
登録日2020-03-29
公開日2020-07-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.231 Å)
主引用文献Super-assembly of ER-phagy receptor Atg40 induces local ER remodeling at contacts with forming autophagosomal membranes.
Nat Commun, 11, 2020
7VED
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BU of 7ved by Molmil
Crystal structure of GABARAP fused to TEX264 LIR with S272D mutation
分子名称: SULFATE ION, Testis-expressed protein 264,Gamma-aminobutyric acid receptor-associated protein
著者Yamasaki, A, Noda, N.N.
登録日2021-09-08
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Phosphorylation by casein kinase 2 enhances the interaction between ER-phagy receptor TEX264 and ATG8 proteins.
Embo Rep., 23, 2022
4IHH
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BU of 4ihh by Molmil
Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4'-PHOSPHOPANTETHEINE, Acyl carrier protein, ...
著者Masoudi, A, Raetz, C.R.H, Pemble, C.W.
登録日2012-12-18
公開日2013-11-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.132 Å)
主引用文献Chasing acyl carrier protein through a catalytic cycle of lipid A production.
Nature, 505, 2014
4IHF
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BU of 4ihf by Molmil
Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production
分子名称: Acyl carrier protein, CHLORIDE ION, S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] (3R)-3-hydroxytetradecanethioate, ...
著者Masoudi, A, Raetz, C.R.H, Pemble, C.W.
登録日2012-12-18
公開日2013-11-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Chasing acyl carrier protein through a catalytic cycle of lipid A production.
Nature, 505, 2014
4IHG
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BU of 4ihg by Molmil
Chasing Acyl Carrier Protein Through a Catalytic Cycle of Lipid A Production
分子名称: 3-HYDROXY-TETRADECANOIC ACID, 4'-PHOSPHOPANTETHEINE, Acyl carrier protein, ...
著者Masoudi, A, Raetz, C.R.H, Pemble, C.W.
登録日2012-12-18
公開日2013-11-13
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Chasing acyl carrier protein through a catalytic cycle of lipid A production.
Nature, 505, 2014
4RRO
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BU of 4rro by Molmil
8-Tetrahydropyran-2-yl chromans: highly selective beta-site amyloid precursor protein cleaving enzyme 1 (BACE1) inhibitors
分子名称: (4S,4a'R,10a'S)-2-amino-8'-(2-fluoropyridin-3-yl)-1,4a'-dimethyl-3',4',4a',10a'-tetrahydro-2'H-spiro[imidazole-4,10'-pyrano[3,2-b]chromen]-5(1H)-one, Beta-secretase 1, NICKEL (II) ION
著者Thomas, A.A, Hunt, K.W, Newhouse, B, Watts, R.J, Liu, X, Vigers, G.P.A, Smith, D, Rhodes, S.P, Brown, K.D, Otten, J.N, Burkard, M, Cox, A.A, Geck Do, M.K, Dutcher, D, Rana, S, DeLisle, R.K, Regal, K, Wright, A.D, Groneberg, R, Liao, J, Scearce-Levie, K, Siu, M, Purkey, H.E, Lyssikatos, J.P.
登録日2014-11-06
公開日2014-12-03
最終更新日2014-12-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献8-Tetrahydropyran-2-yl Chromans: Highly Selective Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitors.
J.Med.Chem., 57, 2014
4RRS
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BU of 4rrs by Molmil
8-Tetrahydropyran-2-yl chromans: highly selective beta-site amyloid precursor protein cleaving enzyme 1 (BACE1) inhibitors
分子名称: (4R,4a'R,10a'S)-8'-(2-fluoropyridin-3-yl)-4a'-methyl-3',4',4a',10a'-tetrahydro-2'H-spiro[1,3-oxazole-4,10'-pyrano[3,2-b]chromen]-2-amine, Beta-secretase 1, NICKEL (II) ION
著者Thomas, A.A, Hunt, K.W, Newhouse, B, Watts, R.J, Liu, X, Vigers, G.P.A, Smith, D, Rhodes, S.P, Brown, K.D, Otten, J.N, Burkard, M, Cox, A.A, Geck Do, M.K, Dutcher, D, Rana, S, DeLisle, R.K, Regal, K, Wright, A.D, Groneberg, R, Liao, J, Scearce-Levie, K, Siu, M, Purkey, H.E, Lyssikatos, J.P.
登録日2014-11-06
公開日2014-12-03
最終更新日2014-12-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献8-Tetrahydropyran-2-yl Chromans: Highly Selective Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitors.
J.Med.Chem., 57, 2014
4RRN
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BU of 4rrn by Molmil
8-Tetrahydropyran-2-yl chromans: highly selective beta-site amyloid precursor protein cleaving enzyme 1 (BACE1) inhibitors
分子名称: (4S,4a'S,10a'R)-2-amino-8'-(2-fluoropyridin-3-yl)-1-methyl-3',4',4a',10a'-tetrahydro-2'H-spiro[imidazole-4,10'-pyrano[3,2-b]chromen]-5(1H)-one, Beta-secretase 1, NICKEL (II) ION
著者Thomas, A.A, Hunt, K.W, Newhouse, B, Watts, R.J, Liu, X, Vigers, G.P.A, Smith, D, Rhodes, S.P, Brown, K.D, Otten, J.N, Burkard, M, Cox, A.A, Geck Do, M.K, Dutcher, D, Rana, S, DeLisle, R.K, Regal, K, Wright, A.D, Groneberg, R, Liao, J, Scearce-Levie, K, Siu, M, Purkey, H.E, Lyssikatos, J.P.
登録日2014-11-06
公開日2014-12-03
最終更新日2014-12-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献8-Tetrahydropyran-2-yl Chromans: Highly Selective Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitors.
J.Med.Chem., 57, 2014
6AAF
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BU of 6aaf by Molmil
Crystal structure of fission yeast Atg8 complexed with the helical AIM of Hfl1.
分子名称: Autophagy-related protein 8, Transmembrane protein 184 homolog C30D11.06c
著者Yamasaki, A, Noda, N.N.
登録日2018-07-18
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.197 Å)
主引用文献Lipidation-independent vacuolar functions of Atg8 rely on its noncanonical interaction with a vacuole membrane protein
Elife, 7, 2018
3NLB
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BU of 3nlb by Molmil
Novel kinase profile highlights the temporal basis of context dependent checkpoint pathways to cell death
分子名称: 3-methyl-5-[5-(1-methylethyl)-1H-benzimidazol-2-yl]-N-(1-methylpiperidin-4-yl)-1H-pyrazole-4-carboxamide, Serine/threonine-protein kinase Chk1
著者Massey, A.J, Borgognoni, J, Bentley, C, Foloppe, N, Fiumana, A, Walmsley, L.
登録日2010-06-21
公開日2011-05-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Context-dependent cell cycle checkpoint abrogation by a novel kinase inhibitor
Plos One, 5, 2010
6AAG
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BU of 6aag by Molmil
Crystal structure of budding yeast Atg8 complexed with the helical AIM of Hfl1.
分子名称: Transmembrane protein 184 homolog YKR051W,Autophagy-related protein 8
著者Yamasaki, A, Noda, N.N.
登録日2018-07-18
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.445 Å)
主引用文献Lipidation-independent vacuolar functions of Atg8 rely on its noncanonical interaction with a vacuole membrane protein
Elife, 7, 2018
1TTR
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BU of 1ttr by Molmil
TRANSTHYRETIN-V/122/I CARDIOMYOPATHIC MUTANT
分子名称: TRANSTHYRETIN
著者Damas, A.M, Lamzin, V.S.
登録日1996-04-11
公開日1996-10-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the Val122Ile variant transthyretin - a cardiomyopathic mutant.
Acta Crystallogr.,Sect.D, 52, 1996
2KDY
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BU of 2kdy by Molmil
NMR structure of LP2086-B01
分子名称: Factor H binding protein variant B01_001
著者Mascioni, A, Bentley, B.E, Camarda, R, Dilts, D.A, Fink, P, Gusarova, V, Hoiseth, S, Jacob, J, Lin, S.L, Malakian, K, McNeil, L.K, Mininni, T, Moy, F, Murphy, E, Novikova, E, Sigethy, S, Wen, Y, Zlotnick, G.W, Tsao, D.H.H.
登録日2009-01-20
公開日2009-02-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Basis for the Immunogenic Properties of the Meningococcal Vaccine Candidate LP2086.
J.Biol.Chem., 284, 2009
2AE2
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BU of 2ae2 by Molmil
TROPINONE REDUCTASE-II COMPLEXED WITH NADP+ AND PSEUDOTROPINE
分子名称: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTEIN (TROPINONE REDUCTASE-II), PSEUDOTROPINE
著者Yamashita, A, Kato, H, Wakatsuki, S, Tomizaki, T, Nakatsu, T, Nakajima, K, Hashimoto, T, Yamada, Y, Oda, J.
登録日1999-01-26
公開日1999-02-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of tropinone reductase-II complexed with NADP+ and pseudotropine at 1.9 A resolution: implication for stereospecific substrate binding and catalysis.
Biochemistry, 38, 1999

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