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PDB: 106 results

4NYT
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BU of 4nyt by Molmil
L-Ficolin Complexed to Phosphocholine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Laffly, E, Gaboriaud, C, Martin, L, Thielens, N.
Deposit date:2013-12-11
Release date:2014-10-29
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Human L-ficolin recognizes phosphocholine moieties of pneumococcal teichoic Acid
J.Immunol., 193, 2014
2JHM
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BU of 2jhm by Molmil
Structure of globular heads of M-ficolin at neutral pH
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, FICOLIN-1, ...
Authors:Garlatti, V, Martin, L, Gout, E, Reiser, J.B, Arlaud, G.J, Thielens, N.M, Gaboriaud, C.
Deposit date:2007-02-22
Release date:2007-10-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural Basis for Innate Immune Sensing by M-Ficolin and its Control by a Ph-Dependent Conformational Switch.
J.Biol.Chem., 282, 2007
2JHH
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BU of 2jhh by Molmil
Structure of globular heads of M-ficolin at acidic pH
Descriptor: CALCIUM ION, FICOLIN-1
Authors:Garlatti, V, Martin, L, Gout, E, Reiser, J.B, Arlaud, G.J, Thielens, N.M, Gaboriaud, C.
Deposit date:2007-02-22
Release date:2007-10-09
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for innate immune sensing by M-ficolin and its control by a pH-dependent conformational switch.
J. Biol. Chem., 282, 2007
2JHK
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BU of 2jhk by Molmil
Structure of globular heads of M-ficolin complexed with N-acetyl-D- glucosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FICOLIN-1
Authors:Garlatti, V, Martin, L, Gout, E, Reiser, J.B, Arlaud, G.J, Thielens, N.M, Gaboriaud, C.
Deposit date:2007-02-22
Release date:2007-10-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Innate Immune Sensing by M-Ficolin and its Control by a Ph-Dependent Conformational Switch.
J.Biol.Chem., 282, 2007
2JHI
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BU of 2jhi by Molmil
Structure of globular heads of M-ficolin complexed with N-acetyl-D- galactosamine
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, FICOLIN-1
Authors:Garlatti, V, Martin, L, Gout, E, Reiser, J.B, Arlaud, G.J, Thielens, N.M, Gaboriaud, C.
Deposit date:2007-02-22
Release date:2007-10-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Innate Immune Sensing by M-Ficolin and its Control by a Ph-Dependent Conformational Switch.
J.Biol.Chem., 282, 2007
2JHL
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BU of 2jhl by Molmil
Structure of globular heads of M-ficolin complexed with sialic acid
Descriptor: CALCIUM ION, FICOLIN-1, N-acetyl-beta-neuraminic acid
Authors:Garlatti, V, Martin, L, Gout, E, Reiser, J.B, Arlaud, G.J, Thielens, N.M, Gaboriaud, C.
Deposit date:2007-02-22
Release date:2007-10-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Innate Immune Sensing by M-Ficolin and its Control by a Ph-Dependent Conformational Switch.
J.Biol.Chem., 282, 2007
5F25
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BU of 5f25 by Molmil
Crystal structure of the BRD9 bromodomain in complex with compound 4.
Descriptor: 4-(1,5-dimethyl-6-oxidanylidene-pyridin-3-yl)benzamide, BRD9
Authors:Bader, G, Martin, L.J, Steurer, S, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2015-12-01
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
5F1H
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BU of 5f1h by Molmil
Crystal structure of the BRD9 bromodamian in complex with BI-9564.
Descriptor: 4-[4-[(dimethylamino)methyl]-2,5-dimethoxy-phenyl]-2-methyl-2,7-naphthyridin-1-one, Bromodomain-containing protein 9
Authors:Bader, G, Martin, L.J, Steurer, S, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2015-11-30
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
5F1L
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BU of 5f1l by Molmil
Crystal structure of the bromodomain of BRD9 in complex with compound 9.
Descriptor: 5-[3,5-dimethoxy-4-[(3-oxidanylazetidin-1-yl)methyl]phenyl]-1,3-dimethyl-pyridin-2-one, Bromodomain-containing protein 9
Authors:Bader, G, Martin, L.J, Steurer, S, Weiss-Puxbaum, A, Zoephel, A.
Deposit date:2015-11-30
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
2PZY
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BU of 2pzy by Molmil
Structure of MK2 Complexed with Compound 76
Descriptor: (4R)-N-[4-({[2-(DIMETHYLAMINO)ETHYL]AMINO}CARBONYL)-1,3-THIAZOL-2-YL]-4-METHYL-1-OXO-2,3,4,9-TETRAHYDRO-1H-BETA-CARBOLINE-6-CARBOXAMIDE, MAP kinase-activated protein kinase 2, STAUROSPORINE
Authors:White, A, Wu, J.P, Wang, J, Abeywardane, A, Andersen, D, Emmanuel, M, Gautschi, E, Goldberg, D.R, Kashem, M.A, Lukas, S, Mao, W, Martin, L, Morwick, T, Moss, N, Pargellis, C, Patel, U.R, Patnaude, L, Peet, G.W, Skow, D, Snow, R.J, Ward, Y, Werneburg, B.
Deposit date:2007-05-18
Release date:2007-07-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The discovery of carboline analogs as potent MAPKAP-K2 inhibitors
Bioorg.Med.Chem.Lett., 17, 2007
6FD2
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BU of 6fd2 by Molmil
Radical SAM 1,2-diol dehydratase AprD4 in complex with its substrate paromamine
Descriptor: 5'-DEOXYADENOSINE, IRON/SULFUR CLUSTER, METHIONINE, ...
Authors:Liu, W.Q, Amara, P, Mouesca, J.M, Ji, X, Renoux, O, Martin, L, Zhang, C, Zhang, Q, Nicolet, Y.
Deposit date:2017-12-21
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:1,2-Diol Dehydration by the Radical SAM Enzyme AprD4: A Matter of Proton Circulation and Substrate Flexibility.
J. Am. Chem. Soc., 140, 2018
1YYL
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BU of 1yyl by Molmil
crystal structure of CD4M33, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 gp120 envelope glycoprotein and anti-HIV-1 antibody 17b
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD4M33, scorpion-toxin mimic of CD4, ...
Authors:Huang, C.C, Stricher, F, Martin, L, Decker, J.M, Majeed, S, Barthe, P, Hendrickson, W.A, Robinson, J, Roumestand, C, Sodroski, J, Wyatt, R, Shaw, G.M, Vita, C, Kwong, P.D.
Deposit date:2005-02-25
Release date:2005-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Scorpion-toxin mimics of CD4 in complex with human immunodeficiency virus gp120 crystal structures, molecular mimicry, and neutralization breadth.
Structure, 13, 2005
1YYM
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BU of 1yym by Molmil
crystal structure of F23, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 gp120 envelope glycoprotein and anti-HIV-1 antibody 17b
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Exterior membrane glycoprotein(GP120),Exterior membrane glycoprotein(GP120),Exterior membrane glycoprotein(GP120), ...
Authors:Huang, C.C, Stricher, F, Martin, L, Decker, J.M, Majeed, S, Barthe, P, Hendrickson, W.A, Robinson, J, Roumestand, C, Sodroski, J, Wyatt, R, Shaw, G.M, Vita, C, Kwong, P.D.
Deposit date:2005-02-25
Release date:2005-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Scorpion-toxin mimics of CD4 in complex with human immunodeficiency virus gp120 crystal structures, molecular mimicry, and neutralization breadth.
Structure, 13, 2005
6TN6
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BU of 6tn6 by Molmil
X-ray structure of the endo-beta-1,4-mannanase from Thermotoga petrophila
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:da Silva, V.M, Squina, F.M, Sperenca, M, Martin, L, Muniz, J.R.C, Garcia, W, Nicolet, Y.
Deposit date:2019-12-06
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:High-resolution structure of a modular hyperthermostable endo-beta-1,4-mannanase from Thermotoga petrophila: The ancillary immunoglobulin-like module is a thermostabilizing domain.
Biochim Biophys Acta Proteins Proteom, 1868, 2020
4JY9
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BU of 4jy9 by Molmil
X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters
Descriptor: CHAPSO, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Nicolet, Y, Rohac, R, Martin, L, Fontecilla-Camps, J.C.
Deposit date:2013-03-29
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JYF
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BU of 4jyf by Molmil
X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Descriptor: CARBONATE ION, CHAPSO, CHLORIDE ION, ...
Authors:Nicolet, Y, Rohac, R, Martin, L, Fontecilla-Camps, J.C.
Deposit date:2013-03-29
Release date:2013-05-01
Last modified:2013-05-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JYE
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BU of 4jye by Molmil
X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Descriptor: BROMIDE ION, Biotin synthetase, putative, ...
Authors:Nicolet, Y, Rohac, R, Martin, L, Fontecilla-Camps, J.C.
Deposit date:2013-03-29
Release date:2013-05-01
Last modified:2013-05-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JYD
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BU of 4jyd by Molmil
X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, BROMIDE ION, CHAPSO, ...
Authors:Nicolet, Y, Rohac, R, Martin, L, Fontecilla-Camps, J.C.
Deposit date:2013-03-29
Release date:2013-05-01
Last modified:2013-05-15
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Proc.Natl.Acad.Sci.USA, 110, 2013
3MVW
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BU of 3mvw by Molmil
X-ray structure of a "NikA+Iron complex" hybrid, NikA/1
Descriptor: 2-[2-[carboxymethyl(phenylmethyl)amino]ethyl-[(2-hydroxyphenyl)methyl]amino]ethanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Cavazza, C, Bochot, C, Rousselot-Pailley, P, Carpentier, P, Cherrier, M.V, Martin, L, Marchi-Delapierre, C, Fontecilla-Camps, J.C, Menage, S.
Deposit date:2010-05-05
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystallographic snapshots of the reaction of aromatic C-H with O(2) catalysed by a protein-bound iron complex
NAT.CHEM., 2, 2010
3MVY
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BU of 3mvy by Molmil
X-ray structure of the diatomic oxo-intermediate NikA/1-Int', prior hydroxylation
Descriptor: 2-[2-[carboxymethyl(phenylmethyl)amino]ethyl-[(2-hydroxyphenyl)methyl]amino]ethanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Cavazza, C, Bochot, C, Rousselot-Pailley, P, Carpentier, P, Cherrier, M.V, Martin, L, Marchi-Delapierre, C, Fontecilla-Camps, J.C, Menage, S.
Deposit date:2010-05-05
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic snapshots of the reaction of aromatic C-H with O(2) catalysed by a protein-bound iron complex
NAT.CHEM., 2, 2010
3MZ9
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BU of 3mz9 by Molmil
X-ray structure of NikA in complex with HBED
Descriptor: 2-[2-[carboxymethyl-[(2-hydroxyphenyl)methyl]amino]ethyl-[(2-hydroxyphenyl)methyl]amino]ethanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Cavazza, C, Bochot, C, Rousselot-Pailley, P, Carpentier, P, Cherrier, M.V, Martin, L, Marchi-Delapierre, C, Fontecilla-Camps, J.C, Menage, S.
Deposit date:2010-05-12
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic snapshots of the reaction of aromatic C-H with O(2) catalysed by a protein-bound iron complex
NAT.CHEM., 2, 2010
3MVX
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BU of 3mvx by Molmil
X-ray structure of the reduced NikA/1 hybrid, NikA/1-Red
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 2-[2-[carboxymethyl(phenylmethyl)amino]ethyl-[(2-hydroxyphenyl)methyl]amino]ethanoic acid, ...
Authors:Cavazza, C, Bochot, C, Rousselot-Pailley, P, Carpentier, P, Cherrier, M.V, Martin, L, Marchi-Delapierre, C, Fontecilla-Camps, J.C, Menage, S.
Deposit date:2010-05-05
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic snapshots of the reaction of aromatic C-H with O(2) catalysed by a protein-bound iron complex
NAT.CHEM., 2, 2010
3MVZ
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BU of 3mvz by Molmil
X-ray structure of the (hydro)peroxo intermediate NikA/1-Int", after monohydroxylation of the iron complex
Descriptor: 2-[2-[carboxymethyl-[(2-hydroxyphenyl)methyl]amino]ethyl-[(2-hydroxyphenyl)methyl]amino]ethanoic acid, ACETATE ION, FE (III) ION, ...
Authors:Cavazza, C, Bochot, C, Rousselot-Pailley, P, Carpentier, P, Cherrier, M.V, Martin, L, Marchi-Delapierre, C, Fontecilla-Camps, J.C, Menage, S.
Deposit date:2010-05-05
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic snapshots of the reaction of aromatic C-H with O(2) catalysed by a protein-bound iron complex
NAT.CHEM., 2, 2010
3MZB
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BU of 3mzb by Molmil
X-ray structure of NikA in complex with the doubly hydroxylated iron complex, 1-O2
Descriptor: 2-[2-[carboxymethyl-[(2-hydroxyphenyl)methyl]amino]ethyl-[(2,3-dihydroxyphenyl)methyl]amino]ethanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Cavazza, C, Bochot, C, Rousselot-Pailley, P, Carpentier, P, Cherrier, M.V, Martin, L, Marchi-Delapierre, C, Fontecilla-Camps, J.C, Menage, S.
Deposit date:2010-05-12
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic snapshots of the reaction of aromatic C-H with O(2) catalysed by a protein-bound iron complex
NAT.CHEM., 2, 2010
4R9T
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BU of 4r9t by Molmil
L-ficolin complexed to sulphates
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Laffly, E, Lacroix, M, Martin, L, Vassal-Stermann, E, Thielens, N, Gaboriaud, C.
Deposit date:2014-09-08
Release date:2014-11-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Human ficolin-2 recognition versatility extended: An update on the binding of ficolin-2 to sulfated/phosphated carbohydrates.
Febs Lett., 588, 2014

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