Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1323 件

3CT0
DownloadVisualize
BU of 3ct0 by Molmil
Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Morphogenesis protein 1
著者Xiang, Y, Rossmann, M.G.
登録日2008-04-11
公開日2008-07-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4V0B
DownloadVisualize
BU of 4v0b by Molmil
Escherichia coli FtsH hexameric N-domain
分子名称: ATP-DEPENDENT ZINC METALLOPROTEASE FTSH, SULFATE ION
著者Serek-Heuberger, J, Martin, J, Lupas, A.N, Hartmann, M.D.
登録日2014-09-13
公開日2015-01-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure and Evolution of N-Domains in Aaa Metalloproteases.
J.Mol.Biol., 427, 2015
5OCR
DownloadVisualize
BU of 5ocr by Molmil
Crystal structure of the kappa-carrageenase zobellia_236 from Zobellia galactanivorans
分子名称: GLYCEROL, Kappa-carrageenase, MAGNESIUM ION
著者Czjzek, M, Matard-Mann, M, Michel, G, Jeudy, A, Larocque, R.
登録日2017-07-03
公開日2017-10-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural insights into marine carbohydrate degradation by family GH16 kappa-carrageenases.
J. Biol. Chem., 292, 2017
7NIP
DownloadVisualize
BU of 7nip by Molmil
titin N2A unique sequence (UN2A) core
分子名称: Isoform 11 of Titin
著者Zhou, T, Kovermann, M, Fleming, J.R, Mayans, O.
登録日2021-02-13
公開日2021-03-03
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Molecular Characterisation of Titin N2A and Its Binding of CARP Reveals a Titin/Actin Cross-linking Mechanism.
J.Mol.Biol., 433, 2021
5A1Q
DownloadVisualize
BU of 5a1q by Molmil
Crystal structure of Archaeoglobus fulgidus Af1502
分子名称: AF1502, SULFATE ION
著者Albrecht, R, Lupas, A.N, Hartmann, M.D.
登録日2015-05-04
公開日2015-10-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Stac-A New Domain Associated with Transmembrane Solute Transport and Two-Component Signal Transduction Systems.
J.Mol.Biol., 427, 2015
5ADP
DownloadVisualize
BU of 5adp by Molmil
Crystal structure of the A.17 antibody FAB fragment - Light chain S35R mutant
分子名称: FAB A.17
著者Chatziefthimiou, S.D, Smirnov, I.V, Golovin, A.V, Stepanova, A.V, Peng, Y, Zolotareva, O.I, Belogurov, A.A, Ponomarenko, N.A, Blackburn, G.M, Gabibov, A.A, Lerner, R, Wilmanns, M.
登録日2015-08-21
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Robotic Qm/Mm-Driven Maturation of Antibody Combining Sites.
Sci.Adv., 2, 2016
8C6P
DownloadVisualize
BU of 8c6p by Molmil
Fragment screening hit I bound to endothiapepsin
分子名称: 4-[(2-azanyl-4-methyl-1,3-thiazol-5-yl)methyl]benzenecarbonitrile, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C6Q
DownloadVisualize
BU of 8c6q by Molmil
Fragment screening hit II bound to endothiapepsin
分子名称: 3-(4-methylimidazol-1-yl)-5-(trifluoromethyl)aniline, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C70
DownloadVisualize
BU of 8c70 by Molmil
Pyrrolidine fragment 1 bound to endothiapepsin
分子名称: (3~{R},4~{R})-4-[4-[(5-bromanylpyridin-3-yl)oxymethyl]-1,2,3-triazol-1-yl]pyrrolidin-3-ol, Endothiapepsin
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C71
DownloadVisualize
BU of 8c71 by Molmil
Pyrrolidine fragment 5b bound to endothiapepsin
分子名称: (3~{R},4~{R})-4-(3,4-dihydro-1~{H}-isoquinolin-2-yl)pyrrolidin-3-ol, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C72
DownloadVisualize
BU of 8c72 by Molmil
Pyrrolidine fragment 10b bound to endothiapepsin
分子名称: (3~{S},4~{S})-4-(4-pyridin-2-yl-1,2,3-triazol-1-yl)piperidin-3-ol, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C74
DownloadVisualize
BU of 8c74 by Molmil
Pyrrolidine fragment 10d bound to endothiapepsin
分子名称: (3~{R},4~{R})-4-[4-[(4-azanylphenoxy)methyl]-1,2,3-triazol-1-yl]pyrrolidin-3-ol, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C6S
DownloadVisualize
BU of 8c6s by Molmil
Fragment screening hit III bound to endothiapepsin
分子名称: 4-(1,4-diazepan-1-ylsulfonyl)isoquinoline, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
8C6T
DownloadVisualize
BU of 8c6t by Molmil
Fragment screening hit IV bound to endothiapepsin
分子名称: 1-[3,5-bis(chloranyl)phenoxy]propan-2-amine, Endothiapepsin, GLYCEROL
著者Wiese, J.N, Buehrmann, M, Mueller, M.P, Rauh, D.
登録日2023-01-12
公開日2023-05-24
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Fragtory: Pharmacophore-Focused Design, Synthesis, and Evaluation of an sp 3 -Enriched Fragment Library.
J.Med.Chem., 66, 2023
1W66
DownloadVisualize
BU of 1w66 by Molmil
Structure of a lipoate-protein ligase b from Mycobacterium tuberculosis
分子名称: DECANOIC ACID, LIPOYLTRANSFERASE
著者Ma, Q, Wilmanns, M.
登録日2004-08-13
公開日2005-12-08
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献The Mycobacterium Tuberculosis Lipb Enzyme Functions as a Cysteine/Lysine Dyad Acyltransferase.
Proc.Natl.Acad.Sci.USA, 103, 2006
4V15
DownloadVisualize
BU of 4v15 by Molmil
Crystal structure of D-threonine aldolase from Alcaligenes xylosoxidans
分子名称: D-THREONINE ALDOLASE, MANGANESE (II) ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者Uhl, M.K, Oberdorfer, G, Steinkellner, G, Riegler, L, Schuermann, M, Gruber, K.
登録日2014-09-24
公開日2015-03-25
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Crystal Structure of D-Threonine Aldolase from Alcaligenes Xylosoxidans Provides Insight Into a Metal Ion Assisted Plp-Dependent Mechanism.
Plos One, 10, 2015
1MXD
DownloadVisualize
BU of 1mxd by Molmil
Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
著者Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
登録日2002-10-02
公開日2003-06-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
5AFG
DownloadVisualize
BU of 5afg by Molmil
Structure of the Stapled Peptide Bound to Mdm2
分子名称: 1,8-DIETHYL-1,8-DIHYDRODIBENZO[3,4:7,8][1,2,3]TRIAZOLO[4',5':5,6]CYCLOOCTA[1,2-D][1,2,3]TRIAZOLE, E3 UBIQUITIN-PROTEIN LIGASE MDM2, STAPLED PEPTIDE
著者Lau, Y.H, Wu, Y, Rossmann, M, de Andrade, P, Tan, Y.S, McKenzie, G.J, Venkitaraman, A.R, Hyvonen, M, Spring, D.R.
登録日2015-01-22
公開日2016-01-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Double Strain-Promoted Macrocyclization for the Rapid Selection of Cell-Active Stapled Peptides.
Angew.Chem.Int.Ed.Engl., 54, 2015
1VCP
DownloadVisualize
BU of 1vcp by Molmil
SEMLIKI FOREST VIRUS CAPSID PROTEIN (CRYSTAL FORM I)
分子名称: MERCURY (II) ION, SEMLIKI FOREST VIRUS CAPSID PROTEIN
著者Lu, G, Choi, H.-K, Rossmann, M.G.
登録日1996-03-04
公開日1996-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of Semliki Forest virus core protein.
Proteins, 27, 1997
1MXG
DownloadVisualize
BU of 1mxg by Molmil
Crystal Structure of a (Ca,Zn)-dependent alpha-amylase from the hyperthermophilic archaeon Pyrococcus woesei in complex with acarbose
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
著者Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
登録日2002-10-02
公開日2003-06-10
最終更新日2020-09-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
5I6A
DownloadVisualize
BU of 5i6a by Molmil
bicyclo[3.3.2]decapeptide
分子名称: ALA-PHE-GLY-LYD-VAL-PHE-PRO-GLN-ALA-GLY, DIMETHYL SULFOXIDE
著者Bartoloni, M, Waltersperger, S, Bumann, M, Stocker, A, Darbre, T, Reymond, J.-L.
登録日2016-02-16
公開日2016-03-09
最終更新日2019-05-08
実験手法X-RAY DIFFRACTION (0.813 Å)
主引用文献Stereoselective synthesis and structure determination of a bicyclo[3.3.2]decapeptide
Arkivoc, 2014, 2014
1VZW
DownloadVisualize
BU of 1vzw by Molmil
Crystal structure of the bifunctional protein Pria
分子名称: GLYCEROL, PHOSPHORIBOSYL ISOMERASE A, SULFATE ION
著者Kuper, J, Wilmanns, M.
登録日2004-05-27
公開日2005-01-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Two-Fold Repeated (Beta-Alpha)(4) Half-Barrels May Provide a Molecular Tool for Dual Substrate Specificity
Embo Rep., 6, 2005
1MWO
DownloadVisualize
BU of 1mwo by Molmil
Crystal Structure Analysis of the Hyperthermostable Pyrocoocus woesei alpha-amylase
分子名称: CALCIUM ION, ZINC ION, alpha amylase
著者Linden, A, Mayans, O, Meyer-Klaucke, W, Antranikian, G, Wilmanns, M.
登録日2002-09-30
公開日2003-06-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Differential Regulation of a Hyperthermophilic alpha-Amylase with a Novel (Ca,Zn) Two-metal Center by Zinc
J.Biol.Chem., 278, 2003
4USH
DownloadVisualize
BU of 4ush by Molmil
Nitrogen regulatory protein PII from Chlamydomonas reinhardtii in unliganded state
分子名称: NITROGEN REGULATORY PROTEIN PII, SULFATE ION
著者Chellamuthu, V.R, Forchhammer, K, Hartmann, M.D.
登録日2014-07-08
公開日2014-12-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Widespread Glutamine-Sensing Mechanism in the Plant Kingdom.
Cell(Cambridge,Mass.), 159, 2014
5W3O
DownloadVisualize
BU of 5w3o by Molmil
CryoEM structure of rhinovirus B14 in complex with C5 Fab (33 degrees Celsius, molar ratio 1:3, empty particle)
分子名称: C5 antibody variable heavy domain, C5 antibody variable light domain, viral protein 1, ...
著者Liu, Y, Dong, Y, Rossmann, M.G.
登録日2017-06-08
公開日2017-07-12
最終更新日2019-12-11
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Antibody-induced uncoating of human rhinovirus B14.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon