Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 60 results

5J0E
DownloadVisualize
BU of 5j0e by Molmil
Crystal structures of Pribnow box consensus promoter sequence (P32)
Descriptor: Complementary sequence, Pribnow box consensus promoter sequence, ZINC ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2016-03-28
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
4DWY
DownloadVisualize
BU of 4dwy by Molmil
Interactions of Mn2+ with a non-self-complementary Z-type DNA duplex
Descriptor: DNA (5'-D(*CP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*G)-3'), MANGANESE (II) ION
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2012-02-27
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Interactions of Mn(2+) with a non-self-complementary Z-type DNA duplex
Acta Crystallogr.,Sect.F, 68, 2012
6GN3
DownloadVisualize
BU of 6gn3 by Molmil
Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group P21/n
Descriptor: CHLORIDE ION, COBALT (II) ION, DNA (5'-D(*CP*CP*CP*GP*GP*G)-3'), ...
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2018-05-29
Release date:2019-09-11
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Racemic crystal structures of A-DNA duplexes.
Acta Crystallogr D Struct Biol, 78, 2022
6GN2
DownloadVisualize
BU of 6gn2 by Molmil
Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group R3
Descriptor: DNA (5'-D(*CP*CP*CP*GP*GP*G)-3'), trimethylamine oxide
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2018-05-29
Release date:2019-09-11
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Racemic crystal structures of A-DNA duplexes.
Acta Crystallogr D Struct Biol, 78, 2022
4R47
DownloadVisualize
BU of 4r47 by Molmil
Racemic crystal structure of a bimolecular DNA G-quadruplex (P21/n)
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', MAGNESIUM ION, POTASSIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R44
DownloadVisualize
BU of 4r44 by Molmil
Racemic crystal structure of a tetramolecular DNA G-quadruplex
Descriptor: 5'-D(*TP*GP*GP*GP*GP*T)-3', POTASSIUM ION, SODIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.695 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
5EYQ
DownloadVisualize
BU of 5eyq by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (Pnna)
Descriptor: Complementary strand, Pribnow box template strand, SODIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-11-25
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5EZF
DownloadVisualize
BU of 5ezf by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (Pbca)
Descriptor: CALCIUM ION, Complementary strand, Pribnow box template strand
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-11-26
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5F26
DownloadVisualize
BU of 5f26 by Molmil
Crystal structures of Pribnow box consensus promoter sequence (P63)
Descriptor: Complementary strand, Pribnow box consensus sequence strand
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-12-01
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
5EWB
DownloadVisualize
BU of 5ewb by Molmil
Racemic crystal structures of Pribnow box consensus promoter sequence (P21/c)
Descriptor: PRIBNOW BOX CONSENSUS SEQUENCE- NON-TEMPLATE STRAND, PRIBNOW BOX CONSENSUS SEQUENCE- TEMPLATE STRAND
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Srivastava, S.C, Huc, I.
Deposit date:2015-11-20
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.694 Å)
Cite:Structure elucidation of the Pribnow box consensus promoter sequence by racemic DNA crystallography.
Nucleic Acids Res., 44, 2016
3T8P
DownloadVisualize
BU of 3t8p by Molmil
Crystal structure of d(CGGGTACCCG)4 as a four-way Holliday junction
Descriptor: CALCIUM ION, DNA (5'-D(*CP*GP*GP*GP*TP*AP*CP*CP*CP*G)-3')
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-08-01
Release date:2011-12-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure of d(CGGGTACCCG)(4) as a four-way Holliday junction
Acta Crystallogr.,Sect.F, 67, 2011
5HIX
DownloadVisualize
BU of 5hix by Molmil
Cocrystal structure of an anti-parallel DNA G-quadruplex and a tetra-Quinoline Foldamer
Descriptor: 4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-({[4-(3-aminopropoxy)-8-nitroquinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinolin-2-yl]carbonyl}amino)quinoline-2-carboxylic acid, Dimeric G-quadruplex, POTASSIUM ION
Authors:Mandal, P.K, Baptiste, B, Langlois d'Estaintot, B, Kauffmann, B, Huc, I.
Deposit date:2016-01-12
Release date:2016-11-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Multivalent Interactions between an Aromatic Helical Foldamer and a DNA G-Quadruplex in the Solid State.
Chembiochem, 17, 2016
3V9D
DownloadVisualize
BU of 3v9d by Molmil
Crystal structure of the tetra-decanucleotide d(CCCCGGTACCGGGG)2 as an A-DNA duplex
Descriptor: DNA (5'-D(*CP*CP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*GP*G)-3'), MANGANESE (II) ION
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-12-26
Release date:2012-04-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the tetradecanucleotide d(CCCCGGTACCGGGG)2 as an A-DNA duplex
Acta Crystallogr.,Sect.F, 68, 2012
3UM4
DownloadVisualize
BU of 3um4 by Molmil
X-ray Diffraction Studies of Ring Crystals obtained for d(CACGCG).d(CGCGTG): Stage (i) Hexagonal plates
Descriptor: 6-mer DNA
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-11-12
Release date:2012-07-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Ring crystals of oligonucleotides: Growth stages and X-ray diffraction studies
J.Cryst.Growth, 354, 2012
3FQB
DownloadVisualize
BU of 3fqb by Molmil
Barium interactions with Z-DNA
Descriptor: 5'-D(*CP*AP*CP*GP*CP*G)-3', 5'-D(*CP*GP*CP*GP*TP*G)-3', BARIUM ION
Authors:Mandal, P.K, Venkadesh, S, Vinayak, N, Gautham, N.
Deposit date:2009-01-07
Release date:2009-02-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Barium-DNA interactions
To be published
3ULN
DownloadVisualize
BU of 3uln by Molmil
X-ray Diffraction Studies of Ring Crystals obtained for d(CACGCG).d(CGCGTG): Stage (iii) Hexagonal plates with intense spots and a depression
Descriptor: 6-mer DNA
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-11-11
Release date:2012-07-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Ring crystals of oligonucleotides: Growth stages and X-ray diffraction studies
J.Cryst.Growth, 354, 2012
3GDA
DownloadVisualize
BU of 3gda by Molmil
Crystal study of d(CACGCG).d(CGCGTG) grwon in presence of stannous chloride
Descriptor: 5'-D(*CP*AP*CP*GP*CP*G)-3', 5'-D(*CP*GP*CP*GP*TP*G)-3'
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2009-02-23
Release date:2009-04-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of d(CACGCG).d(CGCGTG) grown in presence of SnCl2
To be Published
3F8O
DownloadVisualize
BU of 3f8o by Molmil
Structure of d(CACGCG).d(CGCGTG) with low concentration of PdCl2
Descriptor: DNA (5'-D(*DCP*DAP*DCP*DGP*DCP*DG)-3'), DNA (5'-D(*DCP*DGP*DCP*DGP*DTP*DG)-3')
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2008-11-13
Release date:2008-11-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structures of d(CACGCG).d(CGCGTG) grown with different metal ions
To be Published
3GCY
DownloadVisualize
BU of 3gcy by Molmil
Crystal studies of d(CACGCG).d(CGCGTG) grown in presence of calcium chloride
Descriptor: 5'-D(*CP*AP*CP*GP*CP*G)-3', 5'-D(*CP*GP*CP*GP*TP*G)-3'
Authors:Mandal, P.K, Venkadesh, S, Nandini, M, Gautham, N.
Deposit date:2009-02-23
Release date:2009-04-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal studies of d(CACGCG).d(CGCGTG) grown with various metal ions
To be Published
3ULM
DownloadVisualize
BU of 3ulm by Molmil
X-ray Diffraction Studies of Ring Crystals obtained for d(CACGCG).d(CGCGTG): Stage (ii) Hexagonal plates with spots
Descriptor: 6-mer DNA
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-11-11
Release date:2012-07-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Ring crystals of oligonucleotides: Growth stages and X-ray diffraction studies
J.Cryst.Growth, 354, 2012
3ULO
DownloadVisualize
BU of 3ulo by Molmil
X-ray Diffraction Studies of Ring Crystals obtained for d(CACGCG).d(CGCGTG): Stage (iv) Hexagonal rings
Descriptor: 6-mer DNA
Authors:Mandal, P.K, Venkadesh, S, Gautham, N.
Deposit date:2011-11-11
Release date:2012-07-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.24 Å)
Cite:Ring crystals of oligonucleotides: Growth stages and X-ray diffraction studies
J.Cryst.Growth, 354, 2012
4R45
DownloadVisualize
BU of 4r45 by Molmil
Racemic crystal structure of a bimolecular DNA G-quadruplex (P-1)
Descriptor: 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', POTASSIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R4A
DownloadVisualize
BU of 4r4a by Molmil
Racemic crystal structure of a cobalt-bound B-DNA duplex
Descriptor: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', COBALT (II) ION, SPERMINE
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R49
DownloadVisualize
BU of 4r49 by Molmil
Racemic crystal structure of a calcium-bound B-DNA duplex
Descriptor: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', CALCIUM ION, SODIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014
4R48
DownloadVisualize
BU of 4r48 by Molmil
Racemic crystal structure of a calcium-bound DNA four-way junction
Descriptor: 5'-D(*CP*CP*GP*GP*TP*AP*CP*CP*GP*G)-3', CALCIUM ION, SODIUM ION
Authors:Mandal, P.K, Collie, G.W, Kauffmann, B, Huc, I.
Deposit date:2014-08-19
Release date:2014-11-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Racemic DNA crystallography.
Angew.Chem.Int.Ed.Engl., 53, 2014

 

123>

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon