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PDB: 2589 results

6TVQ
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BU of 6tvq by Molmil
Structure of native gp41 derived peptide fusion inhibitor
Descriptor: Env polyprotein (Fragment), Envelope glycoprotein gp160
Authors:Huhmann, S, Nyakatura, E.K, Rohrhofer, A, Schmidt, B, Eichler, J, Moschner, J, Roth, C.
Deposit date:2020-01-10
Release date:2021-01-27
Last modified:2023-07-19
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Systematic Evaluation of Fluorination as Modification for Peptide-Based Fusion Inhibitors against HIV-1 Infection.
Chembiochem, 22, 2021
6TVU
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BU of 6tvu by Molmil
Structure of native gp41 derived peptide fusion inhibitor
Descriptor: Env polyprotein (Fragment), Transmembrane protein gp41
Authors:Huhmann, S, Nyakatura, E.K, Rohrhofer, A, Schmidt, B, Eichler, J, Moschner, J, Roth, C, Koksch, B.
Deposit date:2020-01-10
Release date:2021-01-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Systematic Evaluation of Fluorination as Modification for Peptide-Based Fusion Inhibitors against HIV-1 Infection.
Chembiochem, 22, 2021
6EVY
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BU of 6evy by Molmil
Cryo-EM structure of GTPgammaS-microtubule co-polymerised with doublecortin
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Manka, S.W.
Deposit date:2017-11-03
Release date:2018-07-04
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The role of tubulin-tubulin lattice contacts in the mechanism of microtubule dynamic instability.
Nat. Struct. Mol. Biol., 25, 2018
6EVW
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BU of 6evw by Molmil
Cryo-EM structure of GMPCPP-microtubule co-polymerised with doublecortin
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
Authors:Manka, S.W.
Deposit date:2017-11-02
Release date:2018-07-04
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:The role of tubulin-tubulin lattice contacts in the mechanism of microtubule dynamic instability.
Nat. Struct. Mol. Biol., 25, 2018
6TZO
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BU of 6tzo by Molmil
Crystal Structure of Fungal RNA Kinase
Descriptor: 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, tRNA ligase
Authors:Shuman, S, Goldgur, Y, Banerjee, A.
Deposit date:2019-08-12
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor.
Nucleic Acids Res., 47, 2019
3L9B
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BU of 3l9b by Molmil
Crystal Structure of Rat Otoferlin C2A
Descriptor: MAGNESIUM ION, Otoferlin
Authors:Helfmann, S, Neumann, P.
Deposit date:2010-01-04
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The crystal structure of the C2A domain of otoferlin reveals an unconventional top loop region.
J.Mol.Biol., 406, 2011
6TZM
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BU of 6tzm by Molmil
Crystal Structure of Fungal RNA Kinase
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, tRNA ligase
Authors:Shuman, S, Goldgur, Y, Banerjee, A.
Deposit date:2019-08-12
Release date:2019-11-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.714 Å)
Cite:Atomic structures of the RNA end-healing 5'-OH kinase and 2',3'-cyclic phosphodiesterase domains of fungal tRNA ligase: conformational switches in the kinase upon binding of the GTP phosphate donor.
Nucleic Acids Res., 47, 2019
7N6V
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BU of 7n6v by Molmil
Crystal structure of HIV-1 Protease multiple mutants PRS17 with Revertant mutation V48G bound to inhibitor Amprenavir
Descriptor: GLYCEROL, Protease, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
Authors:Burnaman, S.H, Wang, Y.-F, Weber, I.T.
Deposit date:2021-06-09
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Revertant mutation V48G alters conformational dynamics of highly drug resistant HIV protease PRS17.
J.Mol.Graph.Model., 108, 2021
7N6X
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BU of 7n6x by Molmil
Crystal structure of HIV-1 Protease multiple mutants PRS17 bound to inhibitor Amprenavir
Descriptor: Protease, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
Authors:Burnaman, S.H, Wang, Y.-F, Weber, I.T.
Deposit date:2021-06-09
Release date:2021-09-08
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Revertant mutation V48G alters conformational dynamics of highly drug resistant HIV protease PRS17.
J.Mol.Graph.Model., 108, 2021
6FML
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BU of 6fml by Molmil
CryoEM Structure INO80core Nucleosome complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin related protein 5, ...
Authors:Eustermann, S, Schall, K, Kostrewa, D, Strauss, M, Hopfner, K.
Deposit date:2018-01-31
Release date:2018-04-25
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.34 Å)
Cite:Structural basis for ATP-dependent chromatin remodelling by the INO80 complex.
Nature, 556, 2018
4DXG
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BU of 4dxg by Molmil
Crystal structure of Staphylococcal Superantigen-Like protein 4 complexed with sialyl Lewis X
Descriptor: CHLORIDE ION, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose, PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID), ...
Authors:Hermans, S.J, Baker, H.M, Langley, R.J, Baker, E.N, Fraser, J.F.
Deposit date:2012-02-27
Release date:2012-09-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional properties of staphylococcal superantigen-like protein 4
Infect.Immun., 80, 2012
4KUJ
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BU of 4kuj by Molmil
Structural and functional characterization of a novel Alpha Kinase from Entamoeba histolytica
Descriptor: DI(HYDROXYETHYL)ETHER, Protein kinase, putative, ...
Authors:Rehman, S.A.A, Tarique, K.F, Bhattacharya, A, Gourinath, S, Mansuri, M.S.
Deposit date:2013-05-22
Release date:2014-05-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural and functional characterization of a novel Alpha Kinase from Entamoeba histolytica
To be Published
8CPO
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BU of 8cpo by Molmil
Crystal structure of the PolB16_OarG intein variant S1A, N183A, C111A, C165A
Descriptor: PolB16 Intein Cys-less
Authors:Kattelmann, S, Pasch, T, Mootz, H.D, Kuemmel, D.
Deposit date:2023-03-03
Release date:2023-05-17
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and biochemical analysis of a novel atypically split intein reveals a conserved histidine specific to cysteine-less inteins.
Chem Sci, 14, 2023
8CPN
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BU of 8cpn by Molmil
Crystal structure of the PolB16_OarG intein variant S1A, N183A
Descriptor: IODIDE ION, PolB16 intein
Authors:Kattelmann, S, Pasch, T, Mootz, H.D, Kummel, D.
Deposit date:2023-03-03
Release date:2023-05-17
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and biochemical analysis of a novel atypically split intein reveals a conserved histidine specific to cysteine-less inteins.
Chem Sci, 14, 2023
1P6V
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BU of 1p6v by Molmil
Crystal structure of the tRNA domain of transfer-messenger RNA in complex with SmpB
Descriptor: 45-MER, SsrA-binding protein
Authors:Gutmann, S, Haebel, P.W, Metzinger, L, Sutter, M, Felden, B, Ban, N.
Deposit date:2003-04-30
Release date:2003-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of the transfer-RNA domain of transfer-messenger RNA in complex with SmpB
Nature, 424, 2003
4DXF
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BU of 4dxf by Molmil
Crystal structure of Staphylococcal Superantigen-Like protein 4
Descriptor: CHLORIDE ION, GLYCEROL, Staphylococcal enterotoxin-like toxin
Authors:Hermans, S.J, Baker, H.M, Langley, R.J, Baker, E.N, Fraser, J.F.
Deposit date:2012-02-27
Release date:2012-09-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and functional properties of staphylococcal superantigen-like protein 4
Infect.Immun., 80, 2012
8A00
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BU of 8a00 by Molmil
Infectious mouse-adapted ME7 scrapie prion fibril purified from terminally-infected mouse brains
Descriptor: Major prion protein
Authors:Manka, S.W, Wenborn, A, Betts, J, Joiner, S, Saibil, H.R, Collinge, J, Wadsworth, J.D.F.
Deposit date:2022-05-26
Release date:2023-01-18
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:A structural basis for prion strain diversity.
Nat.Chem.Biol., 19, 2023
4QM8
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BU of 4qm8 by Molmil
Crystal Structure of a Putative Cysteine Dioxygnase From Bacillus subtilis: A Alternative Modeling of 3EQE
Descriptor: CYSTEINE, Cysteine dioxygenase, FE (III) ION
Authors:Hartman, S.H, Driggers, C.M, Karplus, P.A.
Deposit date:2014-06-15
Release date:2014-11-26
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs.
Protein Sci., 24, 2015
8CON
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BU of 8con by Molmil
Crystal structure of alcohol dehydrogenase from Arabidopsis thaliana in complex with NADH
Descriptor: 1,2-ETHANEDIOL, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Alcohol dehydrogenase class-P, ...
Authors:Fermani, S, Fanti, S, Carloni, G, Falini, G, Meloni, M, Zaffagnini, M.
Deposit date:2023-02-28
Release date:2024-02-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and biochemical characterization of Arabidopsis alcohol dehydrogenases reveals distinct functional properties but similar redox sensitivity.
Plant J., 118, 2024
3CTK
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BU of 3ctk by Molmil
Crystal structure of the type 1 RIP bouganin
Descriptor: rRNA N-glycosidase
Authors:Fermani, S, Tosi, G, Falini, G, Ripamonti, A, Farini, V, Bolognesi, A, Polito, L.
Deposit date:2008-04-14
Release date:2008-05-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure/function studies on two type 1 ribosome inactivating proteins: Bouganin and lychnin.
J.Struct.Biol., 168, 2009
6KJL
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BU of 6kjl by Molmil
Xylanase J from Bacillus sp. strain 41M-1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Manami, S, Teisuke, T, Nakatani, K, Katano, K, Kojima, K, Saka, N, Mikami, B, Yatsunami, R, Nakamura, S, Yasukawa, K.
Deposit date:2019-07-22
Release date:2019-09-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Increase in the thermostability of GH11 xylanase XynJ from Bacillus sp. strain 41M-1 using site saturation mutagenesis.
Enzyme.Microb.Technol., 130, 2019
6H7H
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BU of 6h7h by Molmil
Crystal structure of redox-sensitive phosphoribulokinase (PRK) from Arabidopsis thaliana
Descriptor: Phosphoribulokinase, chloroplastic
Authors:Fermani, S, Sparla, F, Gurrieri, L, Falini, G, Trost, P.
Deposit date:2018-07-31
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.471 Å)
Cite:ArabidopsisandChlamydomonasphosphoribulokinase crystal structures complete the redox structural proteome of the Calvin-Benson cycle.
Proc.Natl.Acad.Sci.USA, 116, 2019
1JS2
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BU of 1js2 by Molmil
Crystal structure of C77S HiPIP: a serine ligated [4Fe-4S] cluster
Descriptor: IRON/SULFUR CLUSTER, high-potential iron protein
Authors:Mansy, S.S, Xiong, Y, Hemann, C, Hille, R, Sundaralingam, M, Cowan, J.A.
Deposit date:2001-08-16
Release date:2002-01-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure and stability studies of C77S HiPIP: a serine ligated [4Fe-4S] cluster.
Biochemistry, 41, 2002
4QMA
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BU of 4qma by Molmil
Crystal Structure of a Putative Cysteine Dioxygnase From Ralstonia eutropha: An Alternative Modeling of 2GM6 from JCSG Target 361076
Descriptor: 1,2-ETHANEDIOL, Cysteine dioxygenase type I, FE (III) ION, ...
Authors:Hartman, S.H, Driggers, C.M, Karplus, P.A, Joint Center for Structural Genomics (JCSG)
Deposit date:2014-06-15
Release date:2014-11-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs.
Protein Sci., 24, 2015
1G86
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BU of 1g86 by Molmil
CHARCOT-LEYDEN CRYSTAL PROTEIN/N-ETHYLMALEIMIDE COMPLEX
Descriptor: CHARCOT-LEYDEN CRYSTAL PROTEIN, N-ETHYLMALEIMIDE
Authors:Ackerman, S.J, Liu, L, Kwatia, M.A, Savage, M.P, Leonidas, D.D, Swaminathan, G.J, Acharya, K.R.
Deposit date:2000-11-16
Release date:2002-06-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Charcot-Leyden crystal protein (galectin-10) is not a dual function galectin with lysophospholipase activity but binds a lysophospholipase inhibitor in a novel structural fashion.
J.Biol.Chem., 277, 2002

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