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PDB: 77 results

3KIA
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BU of 3kia by Molmil
Crystal structure of mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus
Descriptor: CHLORIDE ION, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Macedo-Ribeiro, S, Pereira, P.J.B, Empadinhas, N, da Costa, M.S.
Deposit date:2009-11-01
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Functional and structural characterization of a novel mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus reveals its dual substrate specificity
Mol.Microbiol., 79, 2011
3O3P
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BU of 3o3p by Molmil
Crystal structure of R. xylanophilus MpgS in complex with GDP-Mannose
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, ...
Authors:Macedo-Ribeiro, S, Pereira, P.J.B, Empadinhas, N, da Costa, M.S.
Deposit date:2010-07-25
Release date:2010-11-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.529 Å)
Cite:Functional and structural characterization of a novel mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus reveals its dual substrate specificity
Mol.Microbiol., 79, 2011
2ODY
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BU of 2ody by Molmil
Thrombin-bound boophilin displays a functional and accessible reactive-site loop
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Boophilin, PHOSPHATE ION, ...
Authors:Macedo-Ribeiro, S, Fuentes-Prior, P, Pereira, P.J.B.
Deposit date:2006-12-27
Release date:2008-01-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Isolation, cloning and structural characterisation of boophilin, a multifunctional kunitz-type proteinase inhibitor from the cattle tick.
Plos One, 3, 2008
3F1Y
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BU of 3f1y by Molmil
Mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus
Descriptor: CHLORIDE ION, MAGNESIUM ION, Mannosyl-3-phosphoglycerate synthase
Authors:Macedo-Ribeiro, S, Pereira, P.J.B, Empadinhas, N, da Costa, M.S.
Deposit date:2008-10-28
Release date:2009-11-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Functional and structural characterization of a novel mannosyl-3-phosphoglycerate synthase from Rubrobacter xylanophilus reveals its dual substrate specificity
Mol.Microbiol., 79, 2011
5TNZ
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HtrA2 S142D mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SODIUM ION, Serine protease HTRA2, ...
Authors:Macedo-Ribeiro, S, Merski, M, Pereira, P.J.B.
Deposit date:2016-10-15
Release date:2017-10-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular motion regulates the activity of the Mitochondrial Serine Protease HtrA2.
Cell Death Dis, 8, 2017
1H98
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BU of 1h98 by Molmil
New Insights into Thermostability of Bacterial Ferredoxins: High Resolution Crystal Structure of the Seven-Iron Ferredoxin from Thermus thermophilus
Descriptor: FE3-S4 CLUSTER, FERREDOXIN, IRON/SULFUR CLUSTER
Authors:Macedo-Ribeiro, S, Martins, B.M, Pereira, P.J.B, Buse, G, Huber, R, Soulimane, T.
Deposit date:2001-03-05
Release date:2001-11-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:New Insights Into the Thermostability of Bacterial Ferredoxins: High-Resolution Crystal Structure of the Seven-Iron Ferredoxin from Thermus Thermophilus
J.Biol.Inorg.Chem., 6, 2001
1VJW
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BU of 1vjw by Molmil
STRUCTURE OF OXIDOREDUCTASE (NADP+(A),FERREDOXIN(A))
Descriptor: FERREDOXIN(A), IRON/SULFUR CLUSTER
Authors:Macedo-Ribeiro, S, Darimont, B, Sterner, R, Huber, R.
Deposit date:1996-10-09
Release date:1996-12-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Small structural changes account for the high thermostability of 1[4Fe-4S] ferredoxin from the hyperthermophilic bacterium Thermotoga maritima.
Structure, 4, 1996
1VNE
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BU of 1vne by Molmil
CHLOROPEROXIDASE FROM THE FUNGUS CURVULARIA INAEQUALIS: MUTANT D292A
Descriptor: VANADATE ION, VANADIUM CHLOROPEROXIDASE
Authors:Macedo-Ribeiro, S, Messerschmidt, A.
Deposit date:1999-01-20
Release date:1999-08-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:X-ray crystal structures of active site mutants of the vanadium-containing chloroperoxidase from the fungus Curvularia inaequalis.
J.Biol.Inorg.Chem., 4, 1999
1VNF
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CHLOROPEROXIDASE FROM THE FUNGUS CURVULARIA INAEQUALIS: MUTANT R360A
Descriptor: VANADATE ION, VANADIUM CHLOROPEROXIDASE
Authors:Macedo-Ribeiro, S, Messerschmidt, A.
Deposit date:1999-01-20
Release date:1999-08-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:X-ray crystal structures of active site mutants of the vanadium-containing chloroperoxidase from the fungus Curvularia inaequalis.
J.Biol.Inorg.Chem., 4, 1999
1VNG
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BU of 1vng by Molmil
CHLOROPEROXIDASE FROM THE FUNGUS CURVULARIA INAEQUALIS: MUTANT H404A
Descriptor: VANADATE ION, VANADIUM CHLOROPEROXIDASE
Authors:Macedo-Ribeiro, S, Messerschmidt, A.
Deposit date:1999-01-20
Release date:1999-08-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystal structures of active site mutants of the vanadium-containing chloroperoxidase from the fungus Curvularia inaequalis.
J.Biol.Inorg.Chem., 4, 1999
1VNH
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BU of 1vnh by Molmil
CHLOROPEROXIDASE FROM THE FUNGUS CURVULARIA INAEQUALIS: MUTANT H496A
Descriptor: VANADATE ION, VANADIUM CHLOROPEROXIDASE
Authors:Macedo-Ribeiro, S, Messerschmidt, A.
Deposit date:1999-01-20
Release date:1999-08-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:X-ray crystal structures of active site mutants of the vanadium-containing chloroperoxidase from the fungus Curvularia inaequalis.
J.Biol.Inorg.Chem., 4, 1999
1VNI
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BU of 1vni by Molmil
CHLOROPEROXIDASE FROM THE FUNGUS CURVULARIA INAEQUALIS: RECOMBINANT HOLO-CHLOROPEROXIDASE
Descriptor: VANADATE ION, VANADIUM CHLOROPEROXIDASE
Authors:Macedo-Ribeiro, S, Messerschmidt, A.
Deposit date:1999-01-20
Release date:1999-08-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:X-ray crystal structures of active site mutants of the vanadium-containing chloroperoxidase from the fungus Curvularia inaequalis.
J.Biol.Inorg.Chem., 4, 1999
1CZV
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BU of 1czv by Molmil
CRYSTAL STRUCTURE OF THE C2 DOMAIN OF HUMAN COAGULATION FACTOR V: DIMERIC CRYSTAL FORM
Descriptor: PROTEIN (COAGULATION FACTOR V)
Authors:Macedo-Ribeiro, S, Bode, W, Huber, R, Kane, W.H, Fuentes-Prior, P.
Deposit date:1999-09-07
Release date:1999-11-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of the membrane-binding C2 domain of human coagulation factor V.
Nature, 402, 1999
1CZS
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BU of 1czs by Molmil
CRYSTAL STRUCTURE OF THE C2 DOMAIN OF HUMAN COAGULATION FACTOR V: COMPLEX WITH PHENYLMERCURY
Descriptor: PHENYLMERCURY, PROTEIN (COAGULATION FACTOR V)
Authors:Macedo-Ribeiro, S, Bode, W, Huber, R, Kane, W.H, Fuentes-Prior, P.
Deposit date:1999-09-07
Release date:1999-11-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of the membrane-binding C2 domain of human coagulation factor V.
Nature, 402, 1999
1CZT
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BU of 1czt by Molmil
CRYSTAL STRUCTURE OF THE C2 DOMAIN OF HUMAN COAGULATION FACTOR V
Descriptor: PROTEIN (COAGULATION FACTOR V)
Authors:Macedo-Ribeiro, S, Bode, W, Huber, R, Kane, W.H, Fuentes-Prior, P.
Deposit date:1999-09-07
Release date:1999-11-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structures of the membrane-binding C2 domain of human coagulation factor V.
Nature, 402, 1999
1VNS
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BU of 1vns by Molmil
RECOMBINANT APO-CHLOROPEROXIDASE FROM CURVULARIA INAEQUALIS
Descriptor: SULFATE ION, VANADIUM CHLOROPEROXIDASE
Authors:Macedo-Ribeiro, S, Messerschmidt, A.
Deposit date:1999-01-14
Release date:1999-08-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:X-ray crystal structures of active site mutants of the vanadium-containing chloroperoxidase from the fungus Curvularia inaequalis.
J.Biol.Inorg.Chem., 4, 1999
7QCP
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BU of 7qcp by Molmil
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.2 - apo form
Descriptor: Glucosyl-3-phosphoglycerate synthase, L(+)-TARTARIC ACID
Authors:Silva, A, Nunes-Costa, D, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2021-11-25
Release date:2022-12-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.2 - apo form
To Be Published
7QI9
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BU of 7qi9 by Molmil
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.2 in complex with UDP
Descriptor: Glucosyl-3-phosphoglycerate synthase, URIDINE-5'-DIPHOSPHATE
Authors:Silva, A, Nunes-Costa, D, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2021-12-14
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 7.2 in complex with UDP
To Be Published
7QIB
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Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 8.5 in complex with UDP
Descriptor: CHLORIDE ION, Glucosyl-3-phosphoglycerate synthase, MAGNESIUM ION, ...
Authors:Silva, A, Nunes-Costa, D, Barbosa Pereira, P.J, Macedo-Ribeiro, S.
Deposit date:2021-12-14
Release date:2022-12-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 8.5 in complex with UDP
To Be Published
7QOQ
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Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 8.5 in complex with UMP and Magnesium
Descriptor: CHLORIDE ION, Glucosyl-3-phosphoglycerate synthase, MAGNESIUM ION, ...
Authors:Silva, A, Barbosa Pereira, P.J, Macedo-Ribeiro, S, Costa, D.
Deposit date:2021-12-27
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 8.5 in complex with UMP and Magnesium
To Be Published
7NZZ
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BU of 7nzz by Molmil
Ras1 guanine nucleotide exchange factor Cdc25 (REM and catalytic domains)
Descriptor: Cell division control protein 25
Authors:Manso, J.A, Pereira, P.J.B, Macedo-Ribeiro, S.
Deposit date:2021-03-24
Release date:2022-07-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Pathogen-specific structural features of Candida albicans Ras1 activation complex: uncovering new antifungal drug targets
Mbio, 2023
4WZN
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BU of 4wzn by Molmil
CRYSTAL STRUCTURE OF THE 2B PROTEIN SOLUBLE DOMAIN FROM HEPATITIS A VIRUS
Descriptor: GLYCEROL, Genome polyprotein
Authors:Garriga, D, Vives-Adrian, L, Buxaderas, M, Ferreira-da-Silva, F, Almeida, B, Macedo-Ribeiro, S, Pereira, P.J, Verdaguer, N.
Deposit date:2014-11-20
Release date:2015-01-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Basis for Host Membrane Remodeling Induced by Protein 2B of Hepatitis A Virus.
J.Virol., 89, 2015
6Q5T
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BU of 6q5t by Molmil
Crystal structure of Mycolicibacterium hassiacum glucosylglycerate hydrolase (MhGgH) - apo form
Descriptor: hydrolase
Authors:Cereija, T.B, Macedo-Ribeiro, S, Pereira, P.J.B.
Deposit date:2018-12-09
Release date:2019-05-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:The structural characterization of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation.
Iucrj, 6, 2019
3BB0
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BU of 3bb0 by Molmil
Crystal Structure of a Trapped Phosphate-Intermediate in Vanadium Apochloroperoxidase Catalyzing a Dephosphorylation Reaction
Descriptor: PHOSPHITE ION, SULFATE ION, Vanadium chloroperoxidase
Authors:Messerschmidt, A, Macedo-Ribeiro, S.
Deposit date:2007-11-09
Release date:2008-02-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a trapped phosphate intermediate in vanadium apochloroperoxidase catalyzing a dephosphorylation reaction
Biochemistry, 47, 2008
1A0L
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BU of 1a0l by Molmil
HUMAN BETA-TRYPTASE: A RING-LIKE TETRAMER WITH ACTIVE SITES FACING A CENTRAL PORE
Descriptor: (2S)-3-(4-carbamimidoylphenyl)-2-hydroxypropanoic acid, BETA-TRYPTASE
Authors:Pereira, P.J.B, Bergner, A, Macedo-Ribeiro, S, Huber, R, Matschiner, G, Fritz, H, Sommerhoff, C.P, Bode, W.
Deposit date:1997-12-03
Release date:1999-03-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Human beta-tryptase is a ring-like tetramer with active sites facing a central pore.
Nature, 392, 1998

 

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