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PDB: 52259 results

2V2D
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BU of 2v2d by Molmil
The A178L mutation in the C-terminal hinge of the flexible loop-6 of triosephosphate isomerase (TIM) induces a more closed conformation of this hinge region in dimeric and monomeric TIM
Descriptor: PHOSPHATE ION, TRIOSEPHOSPHATE ISOMERASE GLYCOSOMAL
Authors:Alahuhta, M, Casteleijn, M.G, Neubauer, P, Wierenga, R.K.
Deposit date:2007-06-05
Release date:2008-02-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Studies Show that the A178L Mutation in the C-Terminal Hinge of the Catalytic Loop-6 of Triosephosphate Isomerase (Tim) Induces a Closed- Like Conformation in Dimeric and Monomeric Tim.
Acta Crystallogr.,Sect.D, 64, 2008
8CDZ
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BU of 8cdz by Molmil
human carbonic anhydrase I complexed with 4-(3-butylureido)benzenesulfonamide
Descriptor: 1-butyl-3-(4-sulfamoylphenyl)urea, Carbonic anhydrase 1, DIMETHYL SULFOXIDE, ...
Authors:Angeli, A, Ferraroni, M.
Deposit date:2023-02-01
Release date:2024-02-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Ureidobenzenesulfonamides as Selective Carbonic Anhydrase I, IX, and XII Inhibitors.
Molecules, 28, 2023
1ZDS
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BU of 1zds by Molmil
Crystal Structure of Met150Gly AfNiR with Acetamide Bound
Descriptor: ACETAMIDE, COPPER (II) ION, Copper-containing nitrite reductase
Authors:Wijma, H.J, MacPherson, I.S, Alexandre, M, Diederix, R.E.M, Canters, G.W, Murphy, M.E.P, Verbeet, M.P.
Deposit date:2005-04-14
Release date:2006-03-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A rearranging ligand enables allosteric control of catalytic activity in copper-containing nitrite reductase.
J.Mol.Biol., 358, 2006
4IC9
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BU of 4ic9 by Molmil
Crystal structure of the full-length matrix subunit (p15) of the Feline Immunodeficiency Virus (FIV) Gag polyprotein
Descriptor: 1,2-ETHANEDIOL, Matrix protein p15
Authors:Serriere, J, Robert, X, Perez, M, Gouet, P, Guillon, C.
Deposit date:2012-12-10
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biophysical characterization and crystal structure of the Feline Immunodeficiency Virus p15 matrix protein.
Retrovirology, 10, 2013
1ZEW
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BU of 1zew by Molmil
B-DNA
Descriptor: 5'-D(*CP*CP*TP*CP*TP*AP*GP*AP*GP*G)-3', SODIUM ION
Authors:Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
Deposit date:2005-04-19
Release date:2005-05-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1ZF5
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BU of 1zf5 by Molmil
GCT duplex B-DNA
Descriptor: 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3'
Authors:Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
Deposit date:2005-04-19
Release date:2005-05-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5CR1
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BU of 5cr1 by Molmil
Crystal structure of TTR/resveratrol/T4 complex
Descriptor: 3,5,3',5'-TETRAIODO-L-THYRONINE, RESVERATROL, Transthyretin
Authors:Zanotti, G, Florio, P, Folli, C, Cianci, M, Del Rio, D, Berni, R.
Deposit date:2015-07-22
Release date:2015-10-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.545 Å)
Cite:Transthyretin Binding Heterogeneity and Anti-amyloidogenic Activity of Natural Polyphenols and Their Metabolites.
J.Biol.Chem., 290, 2015
8CF9
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BU of 8cf9 by Molmil
Crystal structure of the human PXR ligand-binding domain in complex with sclareol
Descriptor: GLYCEROL, Nuclear receptor subfamily 1 group I member 2, sclareol
Authors:Carivenc, C, Derosa, Q, Grimaldi, M, Boulahtouf, A, Balaguer, P, Bourguet, W.
Deposit date:2023-02-03
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the human PXR ligand-binding domain in complex with sclareol
To Be Published
2VFI
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BU of 2vfi by Molmil
Crystal structure of the Plasmodium falciparum triosephosphate isomerase in the loop closed state with 3-phosphoglycerate bound at the active site and interface
Descriptor: 3-PHOSPHOGLYCERIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Gayathri, P, Banerjee, M, Vijayalakshmi, A, Balaram, H, Balaram, P, Murthy, M.R.N.
Deposit date:2007-11-04
Release date:2008-12-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Biochemical and Structural Characterization of Residue 96 Mutants of Plasmodium Falciparum Triosephosphate Isomerase: Active-Site Loop Conformation, Hydration and Identification of a Dimer-Interface Ligand-Binding Site.
Acta Crystallogr.,Sect.D, 65, 2009
4IDI
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BU of 4idi by Molmil
Crystal Structure of Rurm1-related protein from Plasmodium Yoelii, PY06420
Descriptor: GLYCEROL, Oryza sativa Rurm1-related
Authors:Wernimont, A.K, Tempel, W, Lew, J, Walker, J, Arrowsmith, C.H, Edwards, A.M, Schapira, M, Bountra, C, Hui, R, Artz, J.D, Structural Genomics Consortium (SGC)
Deposit date:2012-12-12
Release date:2013-12-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of Rurm1-related protein from Plasmodium Yoelii, PY06420
To be Published
4IDW
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BU of 4idw by Molmil
Polycrystalline T6 Bovine Insulin: Anisotropic Lattice Evolution and Novel Structure Refinement Strategy
Descriptor: Insulin A chain, Insulin B chain, ZINC ION
Authors:Margiolaki, I, Giannopoulou, A.E, Wright, J.P, Knight, L, Norrman, M, Schluckebier, G, Fitch, A, Von Dreele, R.B.
Deposit date:2012-12-13
Release date:2013-06-05
Last modified:2024-10-30
Method:POWDER DIFFRACTION
Cite:High-resolution powder X-ray data reveal the T6 hexameric form of bovine insulin
Acta Crystallogr.,Sect.D, 69, 2013
1ZFG
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BU of 1zfg by Molmil
CTC Duplex B-DNA
Descriptor: 5'-D(*CP*CP*GP*AP*GP*CP*TP*CP*GP*G)-3'
Authors:Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S.
Deposit date:2005-04-20
Release date:2005-05-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:How sequence defines structure: a crystallographic map of DNA structure and conformation.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5CS1
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BU of 5cs1 by Molmil
The structure of the NK1 fragment of HGF/SF
Descriptor: Hepatocyte growth factor
Authors:Sigurdardottir, A.G, Winter, A, Sobkowicz, A, Fragai, M, Chirgadze, D.Y, Ascher, D.B, Blundell, T.L, Gherardi, E.
Deposit date:2015-07-23
Release date:2015-08-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Exploring the chemical space of the lysine-binding pocket of the first kringle domain of hepatocyte growth factor/scatter factor (HGF/SF) yields a new class of inhibitors of HGF/SF-MET binding.
Chem Sci, 6, 2015
5CSC
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BU of 5csc by Molmil
STRUCTURE OF AN OPEN FORM OF CHICKEN HEART CITRATE SYNTHASE AT 2.8 ANGSTROMS RESOLUTION
Descriptor: CITRATE SYNTHASE
Authors:Liao, D.-I, Karpusas, M, Remington, S.J.
Deposit date:1990-05-07
Release date:1991-04-15
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of an open conformation of citrate synthase from chicken heart at 2.8-A resolution
Biochemistry, 30, 1991
8CH8
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BU of 8ch8 by Molmil
Crystal structure of the human PXR ligand-binding domain in complex with liranaftate
Descriptor: Nuclear receptor subfamily 1 group I member 2, ~{O}-(5,6,7,8-tetrahydronaphthalen-2-yl) ~{N}-(6-methoxypyridin-2-yl)-~{N}-methyl-carbamothioate
Authors:Carivenc, C, Derosa, Q, Grimaldi, M, Boulahtouf, A, Balaguer, P, Bourguet, W.
Deposit date:2023-02-07
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of the human PXR ligand-binding domain in complex with liranaftate
To Be Published
4IEL
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BU of 4iel by Molmil
Crystal structure of a glutathione s-transferase family protein from burkholderia ambifaria, target efi-507141, with bound glutathione
Descriptor: GLUTATHIONE, Glutathione S-transferase, N-terminal domain protein, ...
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Armstrong, R.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-12-13
Release date:2012-12-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a glutathione s-transferase family protein from burkholderia ambifaria, target efi-507141, with bound glutathione
To be Published
3NFU
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BU of 3nfu by Molmil
Crystal structure of probable glucarate dehydratase from chromohalobacter salexigens dsm 3043 complexed with magnesium
Descriptor: GLYCEROL, Glucarate dehydratase, MAGNESIUM ION, ...
Authors:Patskovsky, Y, Toro, R, Rutter, M, Sauder, J.M, Gerlt, J.A, Almo, S.C, Burley, S.K, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-06-10
Release date:2010-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Crystal Structure of Glucarate Dehydratase from Chromohalobacter Salexigens
To be Published
8CHY
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BU of 8chy by Molmil
Crystal structure of an 8-repeat consensus TPR superhelix with Zinc.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Liutkus, M, Rojas, A.L, Cortajarena, A.L.
Deposit date:2023-02-08
Release date:2024-02-21
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Diverse crystalline protein scaffolds through metal-dependent polymorphism.
Protein Sci., 33, 2024
8CI8
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BU of 8ci8 by Molmil
Cryo-EM structure of the Nup98(298-327) fibril
Descriptor: Nuclear pore complex protein Nup98
Authors:Ibanez de Opakua, A, Cima-Omori, S, Dienemann, C, Zweckstetter, M.
Deposit date:2023-02-09
Release date:2024-02-21
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:Impact of distinct FG nucleoporin repeats on Nup98 self-association.
Nat Commun, 15, 2024
5CU0
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BU of 5cu0 by Molmil
Crystal structure of CK2alpha with 2-hydroxy-5-methylbenzoic acid and N-(3-(3-chloro-4-(phenyl)benzylamino)propyl)acetamide bound
Descriptor: 2-hydroxy-5-methylbenzoic acid, ACETATE ION, Casein kinase II subunit alpha, ...
Authors:Brear, P, De Fusco, C, Georgiou, K.H, Spring, D, Hyvonen, M.
Deposit date:2015-07-24
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:A fragment-based approach leading to the discovery of a novel binding site and the selective CK2 inhibitor CAM4066.
Bioorg. Med. Chem., 25, 2017
5CUP
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BU of 5cup by Molmil
Structure of Rhodopseudomonas palustris PduL - phosphate bound form
Descriptor: PHOSPHATE ION, Phosphate propanoyltransferase, ZINC ION
Authors:Sutter, M, Erbilgin, O, Kerfeld, C.A.
Deposit date:2015-07-24
Release date:2016-03-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structural Basis of Coenzyme A Recycling in a Bacterial Organelle.
Plos Biol., 14, 2016
3NHA
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BU of 3nha by Molmil
Nucleotide Binding Domain of Human ABCB6 (ADP Mg bound structure)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-binding cassette sub-family B member 6, mitochondrial, ...
Authors:Haffke, M, Menzel, A, Carius, Y, Jahn, D, Heinz, D.W.
Deposit date:2010-06-14
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the nucleotide-binding domain of the human ABCB6 transporter and its complexes with nucleotides.
Acta Crystallogr.,Sect.D, 66, 2010
1Z9U
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BU of 1z9u by Molmil
Structural Genomics, The crystal structure of the acetyl transferase, modifies N-terminal serine of 50S ribosomal subunit protein L7/L12 from Salmonella typhimurium
Descriptor: SULFATE ION, acetyl transferase
Authors:Zhang, R, Zhou, M, Moy, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-04-04
Release date:2005-07-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of the acetyl transferase, modifies N-terminal serine of 50S ribosomal subunit protein L7/L12 from Salmonella typhimurium
TO BE PUBLISHED
5CV3
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BU of 5cv3 by Molmil
C. remanei PGL-1 Dimerization Domain - Hg
Descriptor: ETHYL MERCURY ION, Putative uncharacterized protein
Authors:Aoki, S.T, Bingman, C.A, Wickens, M, Kimble, J.E.
Deposit date:2015-07-25
Release date:2016-02-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.17014766 Å)
Cite:PGL germ granule assembly protein is a base-specific, single-stranded RNase.
Proc.Natl.Acad.Sci.USA, 113, 2016
1ZJC
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BU of 1zjc by Molmil
Aminopeptidase S from S. aureus
Descriptor: COBALT (II) ION, aminopeptidase ampS
Authors:Odintsov, S.G, Sabala, I, Bourenkov, G, Rybin, V, Bochtler, M.
Deposit date:2005-04-28
Release date:2005-06-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Staphylococcus aureus Aminopeptidase S Is a Founding Member of a New Peptidase Clan.
J.Biol.Chem., 280, 2005

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PDB entries from 2024-11-13

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