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PDB: 51964 results

7QWJ
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BU of 7qwj by Molmil
Crystal structure of Glc7 phosphatase
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, Serine/threonine-protein phosphatase PP1-2
Authors:Malhotra, K, Carminati, M, Bertolotti, A, Bellini, D.
Deposit date:2022-01-25
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Glc7 phosphatase
To Be Published
2YWF
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BU of 2ywf by Molmil
Crystal structure of GMPPNP-bound LepA from Aquifex aeolicus
Descriptor: GTP-binding protein lepA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Kawazoe, M, Takemoto, C, Kaminishi, T, Nishino, A, Nakayama-Ushikoshi, R, Hanawa-Suetsugu, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2008-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Crystal structures of GTP-binding protein LepA from Aquifex aeolicus
To be Published
5I69
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BU of 5i69 by Molmil
MBP-MamC magnetite-interaction component mutant-D70A
Descriptor: Maltose-binding periplasmic protein,Tightly bound bacterial magnetic particle protein,Maltose-binding periplasmic protein, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Nudelman, H, Tercedor, C.V, Kolusheva, S, Gonzalez, T.P, Widdrat, M, Grimberg, N, Levi, H, Nelkenbaum, O, Davidove, G, Faivre, D, Jimenez-Lopez, C, Zarivach, R.
Deposit date:2016-02-16
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-function studies of the magnetite-biomineralizing magnetosome-associated protein MamC.
J.Struct.Biol., 194, 2016
5I6I
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BU of 5i6i by Molmil
Crystal structure of a dBCCP-variant of Chaetomium thermophilum acetyl-CoA carboxylase
Descriptor: Acetyl-CoA carboxylase-like protein,Acetyl-CoA carboxylase-like protein,Acetyl-CoA carboxylase-like protein
Authors:Hunkeler, M, Stuttfeld, E, Hagmann, A, Imseng, S, Maier, T.
Deposit date:2016-02-16
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (8.4 Å)
Cite:The dynamic organization of fungal acetyl-CoA carboxylase.
Nat Commun, 7, 2016
5F64
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BU of 5f64 by Molmil
Putative positive transcription regulator (sensor EvgS) from Shigella flexneri
Descriptor: Positive transcription regulator EvgA
Authors:Nocek, B, Osipiuk, J, Mulligan, R, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-05
Release date:2015-12-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Putative positive transcription regulator (sensor EvgS) from Shigella flexneri.
to be published
2YP1
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BU of 2yp1 by Molmil
Crystallization of a 45 kDa peroxygenase- peroxidase from the mushroom Agrocybe aegerita and structure determination by SAD utilizing only the haem iron
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Piontek, K, Strittmatter, E, Ullrich, R, Plattner, D.A, Hofrichter, M.
Deposit date:2012-10-29
Release date:2013-10-23
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural Basis of Substrate Conversion in a New Aromatic Peroxygenase: P450 Functionality with Benefits
J.Biol.Chem., 288, 2013
8ITO
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BU of 8ito by Molmil
Crystal structure of FeRlp from Desulfovibrio vulgaris (Hildenborough)
Descriptor: FE (III) ION, PHOSPHATE ION, Rubredoxin
Authors:Nakatsuji, T, Ogata, H, Kitamura, M.
Deposit date:2023-03-22
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of FeRlp from Desulfovibrio vulgaris (Hildenborough)
To Be Published
2YY8
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BU of 2yy8 by Molmil
Crystal structure of archaeal tRNA-methylase for position 56 (aTrm56) from Pyrococcus horikoshii, complexed with S-adenosyl-L-methionine
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, S-ADENOSYLMETHIONINE, UPF0106 protein PH0461
Authors:Kuratani, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2008-03-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal structure and mutational study of a unique SpoU family archaeal methylase that forms 2'-O-methylcytidine at position 56 of tRNA
J.Mol.Biol., 375, 2008
2YQQ
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BU of 2yqq by Molmil
Solution structure of the zf-HIT domain in zinc finger HIT domain-containing protein 3 (TRIP-3)
Descriptor: ZINC ION, Zinc finger HIT domain-containing protein 3
Authors:Suzuki, S, He, F, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the zf-HIT domain in zinc finger HIT domain-containing protein 3 (TRIP-3)
To be Published
6XIW
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BU of 6xiw by Molmil
Cryo-EM structure of the sodium leak channel NALCN-FAM155A complex
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kschonsak, M, Chua, H.C, Noland, C.L, Weidling, C, Clairfeuille, T, Bahlke, O.O, Ameen, A.O, Li, Z.R, Arthur, C.P, Ciferri, C, Pless, S.A, Payandeh, J.
Deposit date:2020-06-22
Release date:2020-07-29
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of the human sodium leak channel NALCN.
Nature, 587, 2020
5I72
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BU of 5i72 by Molmil
Crystal structure of the oligomeric form of the Lassa virus matrix protein Z
Descriptor: RING finger protein Z, ZINC ION
Authors:Hastie, K, Zandonatti, M, Liu, T, Li, S, Woods Jr, V, Saphire, E.O.
Deposit date:2016-02-16
Release date:2016-03-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of the Oligomeric Form of Lassa Virus Matrix Protein Z.
J.Virol., 90, 2016
3TLS
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BU of 3tls by Molmil
The GLIC pentameric Ligand-Gated Ion Channel E19'P mutant in a locally-closed conformation (LC2 subtype)
Descriptor: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Glr4197 protein
Authors:Sauguet, L, Nury, H, Corringer, P.J, Delarue, M.
Deposit date:2011-08-30
Release date:2012-05-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:A locally closed conformation of a bacterial pentameric proton-gated ion channel.
Nat.Struct.Mol.Biol., 19, 2012
5F5V
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BU of 5f5v by Molmil
Crystal structure of the Snu23-Prp38-MFAP1(217-296) complex of Chaetomium thermophilum
Descriptor: Prp38, Putative uncharacterized protein, Zinc finger domain-containing protein
Authors:Ulrich, A.K.C, Seeger, M, Bartlick, N, Wahl, M.C.
Deposit date:2015-12-04
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Scaffolding in the Spliceosome via Single alpha Helices.
Structure, 24, 2016
5EV7
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BU of 5ev7 by Molmil
The crystal structure of a functionally unknown conserved protein mutant from Bacillus anthracis str. Ames
Descriptor: Conserved domain protein
Authors:Tan, K, Zhou, M, Jedrzejczak, R, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-11-19
Release date:2015-12-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.351 Å)
Cite:The crystal structure of a functionally unknown conserved protein mutant from Bacillus anthracis str. Ames.
To Be Published
5IAT
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BU of 5iat by Molmil
Mechanistic and Structural Analysis of Substrate Recognition and Cofactor Binding by an Unusual Bacterial Prolyl Hydroxylase - apo-BaP4H
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Procollagen-Proline Dioxygenase
Authors:Schnicker, N.J, Dey, M.
Deposit date:2016-02-21
Release date:2016-04-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Bacillus anthracis Prolyl 4-Hydroxylase Modifies Collagen-like Substrates in Asymmetric Patterns.
J.Biol.Chem., 291, 2016
5I7N
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BU of 5i7n by Molmil
MaoC-like dehydratase
Descriptor: MaoC-like dehydratase
Authors:Blaise, M.
Deposit date:2016-02-18
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Deletion of a dehydratase important for intracellular growth and cording renders rough Mycobacterium abscessus avirulent.
Proc.Natl.Acad.Sci.USA, 113, 2016
7QW4
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BU of 7qw4 by Molmil
Pden_5119 protein
Descriptor: NADPH-dependent FMN reductase
Authors:Kryl, M, Sedlacek, V.
Deposit date:2022-01-24
Release date:2023-02-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Insight into Catalysis by the Flavin-Dependent NADH Oxidase (Pden_5119) of Paracoccus denitrificans .
Int J Mol Sci, 24, 2023
5IB5
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BU of 5ib5 by Molmil
Crystal structure of HLA-B*27:09 complexed with the self-peptide pVIPR and Copper
Descriptor: Beta-2-microglobulin, CHLORIDE ION, COPPER (II) ION, ...
Authors:Janke, R, Ballaschk, M, Schmieder, P, Uchanska-Ziegler, B, Ziegler, A, Loll, B.
Deposit date:2016-02-22
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Metal-triggered conformational reorientation of a self-peptide bound to a disease-associated HLA-B*27 subtype.
J.Biol.Chem., 2019
5EWF
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BU of 5ewf by Molmil
Ternary complex of human DNA polymerase eta inserting rCTP opposite an 8-Oxodeoxyguanosine Lesion
Descriptor: CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
Authors:Su, Y, Egli, M, Guengerich, F.P.
Deposit date:2015-11-20
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.782 Å)
Cite:Mechanism of Ribonucleotide Incorporation by Human DNA Polymerase eta.
J.Biol.Chem., 291, 2016
8IU6
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BU of 8iu6 by Molmil
Crystal structure of peptidyl-tRNA hydrolase mutant from Enterococcus faecium
Descriptor: GLYCEROL, Peptidyl-tRNA hydrolase
Authors:Pandey, R, Tripathi, S, Lanka, A.K, Zohib, M, Pal, R.K, Arora, A.
Deposit date:2023-03-23
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of peptidyl-tRNA hydrolase mutant from Enterococcus faecium
To Be Published
2YTZ
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BU of 2ytz by Molmil
Complex structure of Trm1 from Pyrococcus horikoshii with S-adenosyl-L-Homocystein in the orthorhombic crystal-lattice
Descriptor: N(2),N(2)-dimethylguanosine tRNA methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION
Authors:Ihsanawati, Shirouzu, M, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-05
Release date:2007-10-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of tRNA N(2),N(2)-Guanosine Dimethyltransferase Trm1 from Pyrococcus horikoshii
J.Mol.Biol., 383, 2008
8J7S
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BU of 8j7s by Molmil
Structure of the SPARTA complex
Descriptor: DNA (5'-D(P*TP*AP*AP*TP*AP*GP*AP*TP*TP*AP*GP*AP*GP*CP*CP*GP*TP*CP*AP*AP*TP*AP*GP*A)-3'), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*A)-3'), ...
Authors:Guo, M, Zhu, Y, Lin, Z, Huang, Z.
Deposit date:2023-04-28
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (2.84 Å)
Cite:Cryo-EM structure of the ssDNA-activated SPARTA complex.
Cell Res., 33, 2023
5IB2
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BU of 5ib2 by Molmil
Crystal structure of HLA-B*27:05 complexed with the self-peptide pVIPR
Descriptor: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
Authors:Janke, R, Ballaschk, M, Schmieder, P, Uchanska-Ziegler, B, Ziegler, A, Loll, B.
Deposit date:2016-02-22
Release date:2017-02-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Metal-triggered conformational reorientation of a self-peptide bound to a disease-associated HLA-B*27 subtype.
J.Biol.Chem., 2019
6XKU
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BU of 6xku by Molmil
R. capsulatus cyt bc1 with one FeS protein in b position and one in c position (CIII2 b-c)
Descriptor: Cytochrome b, Cytochrome c1, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Steimle, S, Van Eeuwen, T, Ozturk, Y, Kim, H.J, Braitbard, M, Selamoglu, N, Garcia, B.A, Schneidman-Duhovny, D, Murakami, K, Daldal, F.
Deposit date:2020-06-27
Release date:2020-12-30
Last modified:2021-03-03
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structures of engineered active bc 1 -cbb 3 type CIII 2 CIV super-complexes and electronic communication between the complexes.
Nat Commun, 12, 2021
5EWQ
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BU of 5ewq by Molmil
The crystal structure of an amidase family protein from Bacillus anthracis str. Ames
Descriptor: ACETATE ION, Amidase
Authors:Tan, K, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-11-20
Release date:2015-12-09
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The crystal structure of an amidase family protein from Bacillus anthracis str. Ames
To Be Published

225946

數據於2024-10-09公開中

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