Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51938 results

6E57
DownloadVisualize
BU of 6e57 by Molmil
Bacteroides ovatus mixed-linkage glucan utilization locus (MLGUL) SGBP-B in complex with mixed-linkage heptasaccharide
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, SODIUM ION, ...
Authors:Koropatkin, N.M, Schnizlein, M, Bahr, C.M.E.
Deposit date:2018-07-19
Release date:2019-05-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Surface glycan-binding proteins are essential for cereal beta-glucan utilization by the human gut symbiont Bacteroides ovatus.
Cell.Mol.Life Sci., 76, 2019
6E5V
DownloadVisualize
BU of 6e5v by Molmil
human mGlu8 receptor amino terminal domain in complex with (S)-3,4-Dicarboxyphenylglycine (DCPG)
Descriptor: 4-[(S)-amino(carboxy)methyl]benzene-1,2-dicarboxylic acid, CHLORIDE ION, Metabotropic glutamate receptor 8
Authors:Chen, Q, Ho, J.D, Ashok, S, Vargas, M.C, Wang, J, Atwell, S, Bures, M, Schkeryantz, J.M, Monn, J.A, Hao, J.
Deposit date:2018-07-23
Release date:2018-11-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural Basis for ( S)-3,4-Dicarboxyphenylglycine (DCPG) As a Potent and Subtype Selective Agonist of the mGlu8Receptor.
J. Med. Chem., 61, 2018
1V7Q
DownloadVisualize
BU of 1v7q by Molmil
Crystal structure of phosphoglycerate mutase from Thermus thermophilus HB8
Descriptor: phosphoglycerate mutase
Authors:Sugahara, M, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-12-22
Release date:2005-02-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Crystal structure of phosphoglycerate mutase from Thermus thermophilus HB8
To be Published
1UZL
DownloadVisualize
BU of 1uzl by Molmil
MabA from Mycobacterium tuberculosis
Descriptor: 3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE, CESIUM ION
Authors:Cohen-Gonsaud, M, Ducasse, S, Quemard, A, Labesse, G.
Deposit date:2004-03-14
Release date:2005-03-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Maba from Mycobacterium Tuberculosis, a Reductase Involved in Long-Chain Fatty Acid Biosynthesis.
J.Mol.Biol., 320, 2002
1V8D
DownloadVisualize
BU of 1v8d by Molmil
Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus
Descriptor: ZINC ION, hypothetical protein (TT1679)
Authors:Kishishita, S, Terada, T, Shirouzu, M, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-05
Release date:2004-07-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of the conserved hypothetical protein TT1679 from Thermus thermophilus HB8
To be Published
7RBR
DownloadVisualize
BU of 7rbr by Molmil
The crystal structure of Papain-Like Protease of SARS CoV-2, C111S mutant, in complex with a Lys48-linked di-ubiquitin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Papain-like protease, ...
Authors:Osipiuk, J, Tesar, C, Endres, M, Lanham, B.T, Wydorski, P, Fushman, D, Joachimiak, L, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-06
Release date:2021-09-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin.
Nat Commun, 14, 2023
1UYN
DownloadVisualize
BU of 1uyn by Molmil
Translocator domain of autotransporter NalP from Neisseria meningitidis
Descriptor: NALP, PENTAETHYLENE GLYCOL MONODECYL ETHER, SULFATE ION
Authors:Oomen, C.J, Van Ulsen, P, Van Gelder, P, Feijen, M, Tommassen, J, Gros, P.
Deposit date:2004-03-02
Release date:2004-03-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the Translocator Domain of a Bacterial Autotransporter
Embo J., 23, 2004
6E8F
DownloadVisualize
BU of 6e8f by Molmil
Crystal Structure of Human Protocadherin-15 EC3-5 CD2-1
Descriptor: CALCIUM ION, Protocadherin-15, SODIUM ION
Authors:Choudhary, D, Tamilselvan, E, Sotomayor, M.
Deposit date:2018-07-29
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 2020
1VAT
DownloadVisualize
BU of 1vat by Molmil
Iodine derivative of hen egg-white lysozyme
Descriptor: IODIDE ION, Lysozyme C
Authors:Takeda, K, Miyatake, H, Park, S.Y, Kawamoto, M, Kamiya, N, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-02-19
Release date:2005-03-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Multi-wavelength anomalous diffraction method for I and Xe atoms using ultra-high-energy X-rays from SPring-8
J.Appl.Crystallogr., 37, 2004
6EB5
DownloadVisualize
BU of 6eb5 by Molmil
Crystal Structure of Human Protocadherin-15 EC2-3 V250N
Descriptor: CALCIUM ION, Protocadherin-15
Authors:Choudhary, D, Sotomayor, M.
Deposit date:2018-08-04
Release date:2019-08-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.
Proc.Natl.Acad.Sci.USA, 2020
1UU4
DownloadVisualize
BU of 1uu4 by Molmil
X-RAY CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF HUMICOLA GRISEA CEL12A IN COMPLEX WITH CELLOBIOSE
Descriptor: ENDO-BETA-1,4-GLUCANASE, TETRAETHYLENE GLYCOL, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Berglund, G.I, Shaw, A, Stahlberg, J, Kenne, L, Driguez, T.H, Mitchinson, C, Sandgren, M.
Deposit date:2003-12-15
Release date:2004-09-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal Complex Structures Reveal How Substrate is Bound in the -4 to the +2 Binding Sites of Humicola Grisea Cel12A
J.Mol.Biol., 342, 2004
1UW1
DownloadVisualize
BU of 1uw1 by Molmil
A Novel ADP- and Zinc-binding fold from function-directed in vitro evolution
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARTIFICIAL NUCLEOTIDE BINDING PROTEIN (ANBP), ZINC ION
Authors:Lo Surdo, P, Walsh, M.A, Sollazzo, M.
Deposit date:2004-01-28
Release date:2004-03-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:A Novel Adp- and Zinc-Binding Fold from Function-Directed in Vitro Evolution
Nat.Struct.Mol.Biol., 11, 2004
7RRO
DownloadVisualize
BU of 7rro by Molmil
Structure of the 48-nm repeat doublet microtubule from bovine tracheal cilia
Descriptor: Armadillo repeat containing 4, Chromosome 3 C1orf194 homolog, Cilia and flagella associated protein 161, ...
Authors:Gui, M, Anderson, J.R, Botsch, J.J, Meleppattu, S, Singh, S.K, Zhang, Q, Brown, A.
Deposit date:2021-08-10
Release date:2021-10-27
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:De novo identification of mammalian ciliary motility proteins using cryo-EM.
Cell, 184, 2021
4WJN
DownloadVisualize
BU of 4wjn by Molmil
Crystal structure of SUMO1 in complex with phosphorylated PML
Descriptor: Protein PML, Small ubiquitin-related modifier 1
Authors:Cappadocia, L, Mascle, X.H, Bourdeau, V, Tremblay-Belzile, S, Chaker-Margot, M, Lussier-Price, M, Wada, J, Sakaguchi, K, Aubry, M, Ferbeyre, G, Omichinski, J.G.
Deposit date:2014-10-01
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1.
Structure, 23, 2015
4WJP
DownloadVisualize
BU of 4wjp by Molmil
Crystal Structure of SUMO1 in complex with phosphorylated Daxx
Descriptor: Daxx, Small ubiquitin-related modifier 1
Authors:Cappadocia, L, Mascle, X.H, Bourdeau, V, Tremblay-Belzile, S, Chaker-Margot, M, Lussier-Price, M, Wada, J, Sakaguchi, K, Aubry, M, Ferbeyre, G, Omichinski, J.G.
Deposit date:2014-10-01
Release date:2014-12-31
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1.
Structure, 23, 2015
4WL9
DownloadVisualize
BU of 4wl9 by Molmil
Time Resolved Serial Femtosecond Crystallography Captures High Resolution Intermediates of PYP
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Tenboer, J, Schmidt, M.
Deposit date:2014-10-06
Release date:2014-12-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein.
Science, 346, 2014
8DQO
DownloadVisualize
BU of 8dqo by Molmil
Crystal structure of Arabidopsis thaliana COSY
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Coumarin Synthase
Authors:Kim, C.Y, Mitchell, A.J, Gutierrez, M, Weng, J.K.
Deposit date:2022-07-19
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Emergence of a proton exchange-based isomerization and lactonization mechanism in the plant coumarin synthase COSY.
Nat Commun, 14, 2023
1V2F
DownloadVisualize
BU of 1v2f by Molmil
Crystal Structure of T.th HB8 Glutamine Aminotransferase complex with 3-phenylpropionate
Descriptor: Glutamine Aminotransferase, HYDROCINNAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Goto, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-15
Release date:2004-07-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of glutamine:phenylpyruvate aminotransferase from Thermus thermophilus HB8: induced fit and substrate recognition
J.BIOL.CHEM., 279, 2004
8DQR
DownloadVisualize
BU of 8dqr by Molmil
Crystal structure of Arabidopsis thaliana COSY in complex with scopoletin
Descriptor: CALCIUM ION, COENZYME A, Coumarin Synthase, ...
Authors:Kim, C.Y, Mitchell, A.J, Gutierrez, M, Weng, J.K.
Deposit date:2022-07-19
Release date:2023-01-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Emergence of a proton exchange-based isomerization and lactonization mechanism in the plant coumarin synthase COSY.
Nat Commun, 14, 2023
6E5W
DownloadVisualize
BU of 6e5w by Molmil
Crystal structure of human cellular retinol binding protein 3 in complex with abnormal-cannabidiol (abn-CBD)
Descriptor: (1'R,2'R)-5'-methyl-6-pentyl-2'-(prop-1-en-2-yl)-1',2',3',4'-tetrahydro[1,1'-biphenyl]-2,4-diol, GLYCEROL, Retinol-binding protein 5
Authors:Silvaroli, J.A, Banerjee, S, Kiser, P.D, Golczak, M.
Deposit date:2018-07-23
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Abnormal Cannabidiol Modulates Vitamin A Metabolism by Acting as a Competitive Inhibitor of CRBP1.
Acs Chem.Biol., 14, 2019
1V48
DownloadVisualize
BU of 1v48 by Molmil
Calf spleen purine nucleoside phosphorylase (PNP) binary complex with 9-(5,5-difluoro-5-phosphonopenthyl)guanine
Descriptor: 9-(5,5-DIFLUORO-5-PHOSPHONOPENTYL)GUANINE, MAGNESIUM ION, Purine nucleoside phosphorylase, ...
Authors:Luic, M, Koellner, G, Yokomatsu, T, Shibuya, S, Bzowska, A.
Deposit date:2003-11-11
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Calf spleen purine-nucleoside phosphorylase: crystal structure of the binary complex with a potent multisubstrate analogue inhibitor.
Acta Crystallogr.,Sect.D, 60, 2004
6E6Q
DownloadVisualize
BU of 6e6q by Molmil
1.20 A resolution structure of the C-terminally truncated [2Fe-2S] ferredoxin (Bfd) from Pseudomonas aeruginosa
Descriptor: Bacterioferritin-associated ferredoxin, FE2/S2 (INORGANIC) CLUSTER
Authors:Lovell, S, Wijerathne, H, Battaile, K.P, Yao, H, Wang, Y, Rivera, M.
Deposit date:2018-07-25
Release date:2018-09-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Bfd, a New Class of [2Fe-2S] Protein That Functions in Bacterial Iron Homeostasis, Requires a Structural Anion Binding Site.
Biochemistry, 57, 2018
8DQQ
DownloadVisualize
BU of 8dqq by Molmil
Crystal structure of Arabidopsis thaliana COSY in complex with scopoletin
Descriptor: 7-hydroxy-2H-chromen-2-one, ACETATE ION, CALCIUM ION, ...
Authors:Kim, C.Y, Mitchell, A.J, Gutierrez, M, Weng, J.K.
Deposit date:2022-07-19
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Emergence of a proton exchange-based isomerization and lactonization mechanism in the plant coumarin synthase COSY.
Nat Commun, 14, 2023
8DQP
DownloadVisualize
BU of 8dqp by Molmil
Crystal structure of Arabidopsis thaliana COSY in complex with scopoletin
Descriptor: 1,2-ETHANEDIOL, 7-hydroxy-6-methoxy-2H-1-benzopyran-2-one, ACETATE ION, ...
Authors:Kim, C.Y, Mitchell, A.J, Gutierrez, M, Weng, J.K.
Deposit date:2022-07-19
Release date:2023-01-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Emergence of a proton exchange-based isomerization and lactonization mechanism in the plant coumarin synthase COSY.
Nat Commun, 14, 2023
1V3R
DownloadVisualize
BU of 1v3r by Molmil
Crystal structure of TT1020 from Thermus thermophilus HB8
Descriptor: Nitrogen regulatory protein P-II
Authors:Wang, H, Sakai, H, Takemoto-Hori, C, Kaminishi, T, Yamaguchi, H, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-05
Release date:2004-11-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of the signal transducing protein GlnK from Thermus thermophilus HB8.
J.Struct.Biol., 149, 2005

225681

数据于2024-10-02公开中

PDB statisticsPDBj update infoContact PDBjnumon