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PDB: 52230 results

5M3T
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BU of 5m3t by Molmil
Structural tuning of CD81LEL (space group P64)
Descriptor: 1,2-ETHANEDIOL, CD81 antigen, CHLORIDE ION
Authors:Cunha, E.S, Sfriso, P, Rojas, A.L, Roversi, P, Hospital, A, Orozco, M, Abrescia, N.G.
Deposit date:2016-10-17
Release date:2016-12-14
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.021 Å)
Cite:Mechanism of Structural Tuning of the Hepatitis C Virus Human Cellular Receptor CD81 Large Extracellular Loop.
Structure, 25, 2017
6O6K
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BU of 6o6k by Molmil
HUaa 19bp SYM DNA pH 5.5
Descriptor: DNA (5'-D(P*AP*TP*TP*TP*CP*AP*TP*GP*AP*T)-3'), DNA (5'-D(P*CP*AP*TP*CP*AP*TP*GP*AP*AP*A)-3'), DNA-binding protein HU-alpha
Authors:Remesh, S.G, Hammel, M.
Deposit date:2019-03-06
Release date:2020-03-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.601 Å)
Cite:Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling.
Nat Commun, 11, 2020
1Q1O
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BU of 1q1o by Molmil
Solution Structure of the PB1 Domain of Cdc24p (Long Form)
Descriptor: Cell division control protein 24
Authors:Yoshinaga, S, Kohjima, M, Ogura, K, Yokochi, M, Takeya, R, Ito, T, Sumimoto, H, Inagaki, F.
Deposit date:2003-07-22
Release date:2003-10-14
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The PB1 domain and the PC motif-containing region are structurally similar protein binding modules
EMBO J., 22, 2003
2BYC
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BU of 2byc by Molmil
BlrB - a BLUF protein, dark state structure
Descriptor: BLUE-LIGHT RECEPTOR OF THE BLUF-FAMILY, FLAVIN MONONUCLEOTIDE
Authors:Jung, A, Domratcheva, T, Tarutina, M, Wu, Q, Ko, W.H, Shoeman, R.L, Gomelsky, M, Gardner, K.H, Schlichting, I.
Deposit date:2005-07-29
Release date:2005-08-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a Bacterial Bluf Photoreceptor: Insights Into Blue Light-Mediated Signal Transduction.
Proc.Natl.Acad.Sci.USA, 102, 2005
7R1I
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BU of 7r1i by Molmil
Crystal structure of CYP125 from Mycobacterium tuberculosis in complex with an inhibitor
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Snee, M, Katariya, M, Levy, C, Leys, D.
Deposit date:2022-02-03
Release date:2023-02-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structure Based Discovery of Inhibitors of CYP125 and CYP142 from Mycobacterium tuberculosis.
Chemistry, 29, 2023
1Q34
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BU of 1q34 by Molmil
Crystal structures of two UBC (E2) enzymes of the ubiquitin-conjugating system in Caenorhabditis elegans
Descriptor: Ubiquitin-conjugating enzyme E2-21.5 kDa
Authors:Schormann, N, Lin, G, Li, S, Symersky, J, Qiu, S, Finley, J, Luo, D, Stanton, A, Carson, M, Luo, M, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2003-07-28
Release date:2003-08-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of two UBC (E2) enzymes of the ubiquitin-conjugating system in Caenorhabditis elegans
To be Published
2RU1
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BU of 2ru1 by Molmil
Solution structure of esf3
Descriptor: Uncharacterized protein
Authors:Umetsu, Y, Mori, M, Ohki, S.
Deposit date:2013-11-06
Release date:2014-04-23
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Central cell-derived peptides regulate early embryo patterning in flowering plants
Science, 344, 2014
6OC5
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BU of 6oc5 by Molmil
Lanthanide-dependent methanol dehydrogenase XoxF from Methylobacterium extorquens, in complex with Lanthanum
Descriptor: LANTHANUM (III) ION, Lanthanide-dependent methanol dehydrogenase XoxF
Authors:Fellner, M, Good, N.M, Martinez-Gomez, N.C, Hausinger, R.P, Hu, J.
Deposit date:2019-03-21
Release date:2020-05-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Lanthanide-dependent alcohol dehydrogenases require an essential aspartate residue for metal coordination and enzymatic function.
J.Biol.Chem., 295, 2020
6OCT
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BU of 6oct by Molmil
Crystal structure of human KCTD16 T1 domain
Descriptor: BTB/POZ domain-containing protein KCTD16
Authors:Zuo, H, Glaaser, I, Zhao, Y, Kurinov, I, Mosyak, L, Wang, H, Liu, J, Park, J, Frangaj, A, Sturchler, E, Zhou, M, McDonald, P, Geng, Y, Slesinger, P.A, Fan, Q.R.
Deposit date:2019-03-25
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for auxiliary subunit KCTD16 regulation of the GABABreceptor.
Proc.Natl.Acad.Sci.USA, 116, 2019
4NAB
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BU of 4nab by Molmil
Structure of the (SR)Ca2+-ATPase mutant E309Q in the Ca2-E1-MgAMPPCP form
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, POTASSIUM ION, ...
Authors:Bublitz, M, Clausen, J.D, Arnou, B, Montigny, C, Jaxel, C, Nissen, P, Moller, J.V, Andersen, J.P, le Maire, M.
Deposit date:2013-10-22
Release date:2013-12-18
Last modified:2017-08-09
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:SERCA mutant E309Q binds two Ca(2+) ions but adopts a catalytically incompetent conformation.
Embo J., 32, 2013
6GDR
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BU of 6gdr by Molmil
DNA binding with a minimal scaffold: Structure-function analysis of Lig E DNA ligases
Descriptor: ADENOSINE MONOPHOSPHATE, DNA, DNA (5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'), ...
Authors:Williamson, A, Grigic, M, Leiros, H.K.S.
Deposit date:2018-04-24
Release date:2018-07-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:DNA binding with a minimal scaffold: structure-function analysis of Lig E DNA ligases.
Nucleic Acids Res., 46, 2018
6N9K
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BU of 6n9k by Molmil
Beta-lactamase from Escherichia coli str. Sakai
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, GLYCEROL, ...
Authors:Osipiuk, J, Wu, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-12-03
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Beta-lactamase from Escherichia coli str. Sakai
to be published
6OEN
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BU of 6oen by Molmil
Cryo-EM structure of mouse RAG1/2 PRC complex (DNA1)
Descriptor: CALCIUM ION, DNA (46-MER), DNA (57-MER), ...
Authors:Chen, X, Cui, Y, Zhou, Z.H, Yang, W, Gellert, M.
Deposit date:2019-03-27
Release date:2020-01-29
Last modified:2020-02-26
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cutting antiparallel DNA strands in a single active site.
Nat.Struct.Mol.Biol., 27, 2020
5LYR
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BU of 5lyr by Molmil
Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-noeuromycin
Descriptor: (2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-HYDROXYMETHYL-PIPERIDINE, ACETATE ION, Glycosyl hydrolase family 71, ...
Authors:Petricevic, M, Sobala, L.F, Fernandes, P.Z, Raich, L, Thompson, A.J, Bernardo-Seisdedos, G, Millet, O, Zhu, S, Sollogoub, M, Rovira, C, Jimenez-Barbero, J, Davies, G.J, Williams, S.J.
Deposit date:2016-09-28
Release date:2017-01-11
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Contribution of Shape and Charge to the Inhibition of a Family GH99 endo-alpha-1,2-Mannanase.
J. Am. Chem. Soc., 139, 2017
8FPO
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BU of 8fpo by Molmil
PCSK9 in complex with an inhibitor
Descriptor: CALCIUM ION, MCR-ALA-7T2-GLY-004-7T2-SER-7T2-0NC inhibitor, Proprotein convertase subtilisin/kexin type 9
Authors:Xu, M, Chopra, R.
Deposit date:2023-01-05
Release date:2024-10-16
Method:X-RAY DIFFRACTION (2.997 Å)
Cite:pcsk9 in complex with cyclic peptide
To Be Published
8FVM
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BU of 8fvm by Molmil
PCSK9 in complex with an inhibitor
Descriptor: CALCIUM ION, DGN-DVA-YC3-GLU-PRO-THR-THR-PHE-MAA-A1BC0 inhibitor, Proprotein convertase subtilisin/kexin type 9
Authors:Xu, M, Chopra, R.
Deposit date:2023-01-19
Release date:2024-10-16
Method:X-RAY DIFFRACTION (2.852 Å)
Cite:pcsk9 in complex with cyclic peptide
To Be Published
8FVQ
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BU of 8fvq by Molmil
PCSK9 in complex with an inhibitor
Descriptor: ACE-PHE-VAL-DAB-THR-THR-PHE-MAA-BIF-YBR inhibitor, Proprotein convertase subtilisin/kexin type 9
Authors:Xu, M, Chopra, R.
Deposit date:2023-01-19
Release date:2024-10-16
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:pcsk9 in complex with cyclic peptide
To Be Published
6SZB
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BU of 6szb by Molmil
MoxR AAA-ATPase RavA, spiral open ring conformation
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RavA + Mg-ADP
Authors:Jessop, M, Felix, J, Gutsche, I.
Deposit date:2019-10-02
Release date:2020-02-19
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structural insights into ATP hydrolysis by the MoxR ATPase RavA and the LdcI-RavA cage-like complex.
Commun Biol, 3, 2020
2C61
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BU of 2c61 by Molmil
Crystal structure of the non-catalytic B subunit of A-type ATPase from M. mazei Go1
Descriptor: A-TYPE ATP SYNTHASE NON-CATALYTIC SUBUNIT B
Authors:Schaefer, I, Bailer, S.M, Dueser, M, Boersch, M, Bernal, R.A, Grueber, G, Stock, D.
Deposit date:2005-11-06
Release date:2006-12-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of the Archaeal A1Ao ATP Synthase Subunit B from Methanosarcina Mazei Go1: Implications of Nucleotide-Binding Differences in the Major A1Ao Subunits a and B. Subunits a and B
J.Mol.Biol., 358, 2006
8FPQ
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BU of 8fpq by Molmil
PCSK9 in complex with an inhibitor
Descriptor: CALCIUM ION, MCR-PHE-VAL-PRO-THR-THR-BIF-MAA-BIF-MAA-GLU-ALA-PRO-ALA-NEH inhibitor, Proprotein convertase subtilisin/kexin type 9
Authors:Xu, M, Chopra, R.
Deposit date:2023-01-05
Release date:2024-10-16
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:pcsk9 in complex with cyclic peptide
To Be Published
5M42
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BU of 5m42 by Molmil
Structure of Thermus thermophilus L-proline dehydrogenase lacking alpha helices A, B and C
Descriptor: FLAVIN MONONUCLEOTIDE, Proline dehydrogenase
Authors:Martinez-Julvez, M, Huijbers, M.M.E, van Berkel, W.J.H, Medina, M.
Deposit date:2016-10-18
Release date:2017-03-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Proline dehydrogenase from Thermus thermophilus does not discriminate between FAD and FMN as cofactor.
Sci Rep, 7, 2017
8FVO
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BU of 8fvo by Molmil
PCSK9 in complex with an inhibitor
Descriptor: CALCIUM ION, MCR-ALA-7T2-GLY-004-7T2-SER-7T2-ALA-GLY-NH2 inhibitor, Proprotein convertase subtilisin/kexin type 9
Authors:Xu, M, Chopra, R.
Deposit date:2023-01-19
Release date:2024-10-16
Method:X-RAY DIFFRACTION (2.652 Å)
Cite:pcsk9 in complex with cyclic peptide
To Be Published
8FVL
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BU of 8fvl by Molmil
PCSK9 in complex with an inhibitor
Descriptor: Proprotein convertase subtilisin/kexin type 9, YBX-YC3-VAL-PRO-THR-THR-PHE-MAA-CYS-MN1 inhibitor
Authors:Xu, M, Chopra, R.
Deposit date:2023-01-19
Release date:2024-10-16
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:pcsk9 in complex with cyclic peptide
To Be Published
8FVN
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BU of 8fvn by Molmil
PCSK9 in complex with an inhibitor
Descriptor: MCR-ALO-MAA-ALA-MAA-NLE-7T2-SER-7T2-ALA-NH2 inhibitor, Proprotein convertase subtilisin/kexin type 9
Authors:Xu, M, Chopra, R.
Deposit date:2023-01-19
Release date:2024-10-16
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:pcsk9 in complex with cyclic peptide
To Be Published
2RVD
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BU of 2rvd by Molmil
NMR STRUCTURE of A MUTANT OF CHIGNOLIN, CLN025
Descriptor: CLN025
Authors:Kato, Y, Ishimura, M, Honda, S.
Deposit date:2015-07-14
Release date:2015-08-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Crystal structure of a ten-amino acid protein
J.Am.Chem.Soc., 130, 2008

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