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PDB: 51964 results

7KVC
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Cryo-EM structure of Mal de Rio Cuarto virus P9-1 viroplasm protein (decamer)
Descriptor: p9-1
Authors:Llauger, G, Melero, R, Monti, D, Sycz, G, Huck-Iriart, C, Cerutti, M.L, Klinke, S, Arranz, R, Carazo, J.M, Goldbaum, F.A, del Vas, M, Otero, L.H.
Deposit date:2020-11-27
Release date:2022-06-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:A Fijivirus Major Viroplasm Protein Shows RNA-Stimulated ATPase Activity by Adopting Pentameric and Hexameric Assemblies of Dimers.
Mbio, 14, 2023
1R41
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Crystal structures of d(Gm5CGm5CGCGC) and d(GCGCGm5CGm5C): Effects of methylation on alternating DNA octamers
Descriptor: 5'-D(*GP*CP*GP*CP*GP*(5CM)P*GP*(5CM))-3'
Authors:Shi, K, Pan, B, Tippin, D, Sundaralingam, M.
Deposit date:2003-10-03
Release date:2003-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of d(Gm5)CGm5CGCGC) and d(GCGCGm5CGm5C): effects of methylation on alternating DNA octamers.
Acta Crystallogr.,Sect.D, 60, 2004
7KVD
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Cryo-EM structure of Mal de Rio Cuarto virus P9-1 viroplasm protein (dodecamer)
Descriptor: p9-1
Authors:Llauger, G, Melero, R, Monti, D, Sycz, G, Huck-Iriart, C, Cerutti, M.L, Klinke, S, Arranz, R, Carazo, J.M, Goldbaum, F.A, del Vas, M, Otero, L.H.
Deposit date:2020-11-27
Release date:2022-06-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:A Fijivirus Major Viroplasm Protein Shows RNA-Stimulated ATPase Activity by Adopting Pentameric and Hexameric Assemblies of Dimers.
Mbio, 14, 2023
7L5O
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Crystal structure of the noncovalently bonded complex of rilzabrutinib with BTK
Descriptor: (2E)-2-{(3R)-3-[4-amino-3-(2-fluoro-4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]piperidine-1-carbonyl}-4-methyl-4-[4-(oxetan-3-yl)piperazin-1-yl]pent-2-enenitrile, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Bradshaw, J.M, Brameld, K.A, Mrosek, M, Lammens, A, Blaesse, M.
Deposit date:2020-12-22
Release date:2022-06-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:The Discovery Rilzabrutinib (PRN1008): A Reversible Covalent BTK Inhibitor for Immune Mediated Diseases
To Be Published
7L5P
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Crystal structure of the covalently bonded complex of rilzabrutinib with BTK
Descriptor: (2E)-2-{(3R)-3-[4-amino-3-(2-fluoro-4-phenoxyphenyl)-1H-pyrazolo[3,4-d]pyrimidin-1-yl]piperidine-1-carbonyl}-4-methyl-4-[4-(oxetan-3-yl)piperazin-1-yl]pent-2-enenitrile, 1,2-ETHANEDIOL, SULFATE ION, ...
Authors:Bradshaw, J.M, Brameld, K.A, Mrosek, M, Lammens, A, Blaesse, M.
Deposit date:2020-12-22
Release date:2022-06-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:The Discovery Rilzabrutinib (PRN1008): A Reversible Covalent BTK Inhibitor for Immune Mediated Diseases
To Be Published
1R5W
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Evidence that structural rearrangements and/or flexibility during TCR binding can contribute to T-cell activation
Descriptor: H-2 class II histocompatibility antigen, E-K alpha chain, MHC H2-IE-beta, ...
Authors:Krogsgaard, M, Prado, N, Adams, E, He, X, Chow, D.C, Wilson, D.B, Garcia, K.C, Davis, M.M.
Deposit date:2003-10-13
Release date:2004-03-02
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Evidence that structural rearrangements and/or flexibility during TCR binding can contribute to T cell activation
Mol.Cell, 12, 2003
7KNV
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Solution NMR structure of CDHR3 extracellular domain EC1
Descriptor: CALCIUM ION, Cadherin-related family member 3
Authors:Lee, W, Tonelli, M, Frederick, R.O, Watters, K.E, Markley, J.L, Palmenberg, A.C.
Deposit date:2020-11-06
Release date:2021-02-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR Determination of the CDHR3 Rhinovirus-C Binding Domain, EC1
Viruses, 13, 2021
1R4Q
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Shiga toxin
Descriptor: SHT cytotoxin A subunit, Shigella toxin chain B
Authors:Fraser, M.E, Fujinaga, M, Cherney, M.M, Melton-Celsa, A.R, Twiddy, E.M, O'Brien, A.D, James, M.N.G.
Deposit date:2003-10-07
Release date:2004-05-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Shiga Toxin Type 2 (Stx2) from Escherichia coli O157:H7.
J.Biol.Chem., 279, 2004
4H18
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BU of 4h18 by Molmil
Three dimensional structure of corynomycoloyl tranferase C
Descriptor: Cmt1, MAGNESIUM ION
Authors:Huc, E, de Sousa D'Auria, C, Li de la Sierra-Gallay, I, Salmeron, C.H, van Tilbeurgh, H, Bayan, N, Houssin, C.H, Daffe, M, Tropis, M.
Deposit date:2012-09-10
Release date:2013-09-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.755 Å)
Cite:Identification of a mycoloyl transferase selectively involved in o-acylation of polypeptides in corynebacteriales.
J.Bacteriol., 195, 2013
7L6K
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ApoL1 N-terminal domain
Descriptor: Apolipoprotein L1
Authors:Holliday, M.J, Ultsch, M, Moran, P, Fairbrother, W.J, Kirchhofer, D.
Deposit date:2020-12-23
Release date:2021-08-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structures of the ApoL1 and ApoL2 N-terminal domains reveal a non-classical four-helix bundle motif.
Commun Biol, 4, 2021
7LDO
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BU of 7ldo by Molmil
G150T Pseudomonas fluorescens isocyanide hydratase (G150T-3) at 274K, Phenix-refined
Descriptor: Isonitrile hydratase InhA
Authors:Su, Z, Dasgupta, M, Yoon, C.H, Wilson, M.A.
Deposit date:2021-01-13
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters.
Struct Dyn., 8, 2021
7LG3
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BU of 7lg3 by Molmil
Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope KLWAQCVQL
Descriptor: Beta-2-microglobulin, GLYCEROL, MHC class I antigen, ...
Authors:Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-01-19
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human leukocyte antigen A*0201 in complex with SARS-CoV2 epitope KLWAQCVQL
To Be Published
7L9S
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Wild-type Pseudomonas fluorescens isocyanide hydratase (WT-2) at 274K, Refmac5-refined
Descriptor: Isonitrile hydratase InhA
Authors:Su, Z, Dasgupta, M, Poitevin, F, Mathews, I.I, van den Bedem, H, Wall, M.E, Yoon, C.H, Wilson, M.A.
Deposit date:2021-01-04
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters.
Struct Dyn., 8, 2021
7L9W
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BU of 7l9w by Molmil
Wild-type Pseudomonas fluorescens isocyanide hydratase (WT-3) at 274K, Refmac5-refined
Descriptor: Isonitrile hydratase InhA
Authors:Su, Z, Dasgupta, M, Poitevin, F, Mathews, I.I, van den Bedem, H, Wall, M.E, Yoon, C.H, Wilson, M.A.
Deposit date:2021-01-05
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters.
Struct Dyn., 8, 2021
7LA0
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Pseudomonas fluorescens G150A isocyanide hydratase (G150A-2) at 274K, Refmac5-refined
Descriptor: Isonitrile hydratase InhA
Authors:Su, Z, Dasgupta, M, Poitevin, F, Mathews, I.I, van den Bedem, H, Wall, M.E, Yoon, C.H, Wilson, M.A.
Deposit date:2021-01-05
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters.
Struct Dyn., 8, 2021
7LD6
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G150A Pseudomonas fluorescens isocyanide hydratase (G150A-1) at 274K, Phenix-refined
Descriptor: Isonitrile hydratase InhA
Authors:Su, Z, Dasgupta, M, Yoon, C.H, Wilson, M.A.
Deposit date:2021-01-12
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters.
Struct Dyn., 8, 2021
4GY2
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BU of 4gy2 by Molmil
Crystal structure of apo-Ia-actin complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Tsurumura, T, Oda, M, Nagahama, M, Tsuge, H.
Deposit date:2012-09-05
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Arginine ADP-ribosylation mechanism based on structural snapshots of iota-toxin and actin complex
Proc.Natl.Acad.Sci.USA, 110, 2013
1T7J
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BU of 1t7j by Molmil
crystal structure of inhibitor amprenavir in complex with a multi-drug resistant variant of HIV-1 protease (L63P/V82T/I84V)
Descriptor: ACETATE ION, Pol Polyprotein, {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
Authors:King, N.M, Prabu-Jeyabalan, M, Nalivaika, E.A, Wigerinck, P.B.T.P, De Bethune, M.-P, Schiffer, C.A.
Deposit date:2004-05-10
Release date:2005-05-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery and selection of TMC114, a next generation HIV-1 protease inhibitor
J.Med.Chem., 48, 2005
7L9Q
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Wild-type Pseudomonas fluorescens isocyanide hydratase (WT-1) at 274K, Refmac5-refined
Descriptor: Isonitrile hydratase InhA
Authors:Su, Z, Dasgupta, M, Poitevin, F, Mathews, I.I, van den Bedem, H, Wall, M.E, Yoon, C.H, Wilson, M.A.
Deposit date:2021-01-04
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.149 Å)
Cite:Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters.
Struct Dyn., 8, 2021
7LDQ
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BU of 7ldq by Molmil
Crystal structure of putative NAD(P)H-flavin oxidoreductase from Haemophilus influenzae R2846
Descriptor: ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Maltseva, N, Kim, Y, Endres, M, Crofts, T, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-01-13
Release date:2021-01-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal structure of putative NAD(P)H-flavin oxidoreductase from Haemophilus influenzae R2846
To Be Published
7L9Z
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BU of 7l9z by Molmil
Pseudomonas fluorescens G150A isocyanide hydratase (G150A-1) at 274K, Refmac5-refined
Descriptor: Isonitrile hydratase InhA
Authors:Su, Z, Dasgupta, M, Poitevin, F, Mathews, I.I, van den Bedem, H, Wall, M.E, Yoon, C.H, Wilson, M.A.
Deposit date:2021-01-05
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters.
Struct Dyn., 8, 2021
7LA3
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BU of 7la3 by Molmil
Pseudomonas fluorescens G150A isocyanide hydratase (G150A-3) at 274K, Refmac5-refined
Descriptor: Isonitrile hydratase InhA
Authors:Su, Z, Dasgupta, M, Poitevin, F, Mathews, I.I, van den Bedem, H, Wall, M.E, Yoon, C.H, Wilson, M.A.
Deposit date:2021-01-05
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.349 Å)
Cite:Reproducibility of protein x-ray diffuse scattering and potential utility for modeling atomic displacement parameters.
Struct Dyn., 8, 2021
1T8U
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BU of 1t8u by Molmil
Crystal Structure of human 3-O-Sulfotransferase-3 with bound PAP and tetrasaccharide substrate
Descriptor: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, ADENOSINE-3'-5'-DIPHOSPHATE, SODIUM ION, ...
Authors:Moon, A.F, Edavettal, S.C, Krahn, J.M, Munoz, E.M, Negishi, M, Linhardt, R.J, Liu, J, Pedersen, L.C.
Deposit date:2004-05-13
Release date:2004-08-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of the sulfotransferase (3-o-sulfotransferase isoform 3) involved in the biosynthesis of an entry receptor for herpes simplex virus 1
J.Biol.Chem., 279, 2004
7LG0
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Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope SPRWYFYYL
Descriptor: Beta-2-microglobulin, HEXAETHYLENE GLYCOL, HLA class I histocompatibility antigen, ...
Authors:Patskovska, L, Patskovsky, Y, Krogsgaard, M.
Deposit date:2021-01-19
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human leukocyte antigen B*07:02 in complex with SARS-CoV2 epitope SPRWYFYYL
To Be Published
1T8I
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Human DNA Topoisomerase I (70 Kda) In Complex With The Poison Camptothecin and Covalent Complex With A 22 Base Pair DNA Duplex
Descriptor: 4-ETHYL-4-HYDROXY-1,12-DIHYDRO-4H-2-OXA-6,12A-DIAZA-DIBENZO[B,H]FLUORENE-3,13-DIONE, 5'-D(*(TGP)P*GP*AP*AP*AP*AP*AP*TP*TP*TP*TP*T)-3', 5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*TP*T)-3', ...
Authors:Staker, B.L, Feese, M.D, Cushman, M, Pommier, Y, Zembower, D, Stewart, L, Burgin, A.B.
Deposit date:2004-05-12
Release date:2005-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of three classes of anticancer agents bound to the human topoisomerase I-DNA covalent complex
J.Med.Chem., 48, 2005

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