Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51586 results

2LKJ
DownloadVisualize
BU of 2lkj by Molmil
Structures and Interaction Analyses of the Integrin Alpha-M Beta-2 Cytoplasmic Tails
Descriptor: Integrin alpha-M
Authors:Chua, G.L, Tang, X.Y, Amalraj, M, Tan, S.M, Bhattacharjya, S.
Deposit date:2011-10-12
Release date:2011-11-02
Last modified:2011-11-16
Method:SOLUTION NMR
Cite:Structures and interaction analyses of the integrin alphaMbeta2 cytoplasmic tails
J.Biol.Chem., 2011
2LD3
DownloadVisualize
BU of 2ld3 by Molmil
Solution structure of myosin VI lever arm extension
Descriptor: Myosin VI
Authors:Feng, W, Yu, C, Zhang, M.
Deposit date:2011-05-13
Release date:2012-05-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Membrane-induced lever arm expansion allows myosin VI to walk with large and variable step sizes
To be Published
2LHI
DownloadVisualize
BU of 2lhi by Molmil
Solution structure of Ca2+/CNA1 peptide-bound yCaM
Descriptor: CALCIUM ION, Calmodulin,Serine/threonine-protein phosphatase 2B catalytic subunit A1
Authors:Ogura, K, Takahashi, K, Kobashigawa, Y, Yoshida, R, Itoh, H, Yazawa, M, Inagaki, F.
Deposit date:2011-08-10
Release date:2012-08-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structures of yeast Saccharomyces cerevisiae calmodulin in calcium- and target peptide-bound states reveal similarities and differences to vertebrate calmodulin.
Genes Cells, 17, 2012
2LL6
DownloadVisualize
BU of 2ll6 by Molmil
Solution NMR structure of CaM bound to iNOS CaM binding domain peptide
Descriptor: Calmodulin, Nitric oxide synthase, inducible
Authors:Piazza, M, Futrega, K, Spratt, D.E, Dieckmann, T, Guillemette, J.G.
Deposit date:2011-10-29
Release date:2012-05-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Dynamics of Calmodulin (CaM) Bound to Nitric Oxide Synthase Peptides: Effects of a Phosphomimetic CaM Mutation.
Biochemistry, 51, 2012
2L4J
DownloadVisualize
BU of 2l4j by Molmil
Yap ww2
Descriptor: Yes-associated protein 2 (YAP2)
Authors:Webb, C, Upadhyay, A, Furutani-Seiki, M, Bagby, S.
Deposit date:2010-10-07
Release date:2010-11-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural Features and Ligand Binding Properties of Tandem WW Domains from YAP and TAZ, Nuclear Effectors of the Hippo Pathway.
Biochemistry, 50, 2011
2LLN
DownloadVisualize
BU of 2lln by Molmil
Solution structure of Thermus thermophilus apo-CuA
Descriptor: Cytochrome c oxidase subunit 2
Authors:Zaballa, M, Abriata, L, Donaire, A, Vila, A.
Deposit date:2011-11-15
Release date:2012-05-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Flexibility of the metal binding region in apo-cupredoxins and its implications on the entatic state and in vivo metallation
Proc.Natl.Acad.Sci.USA, 2012
2L7T
DownloadVisualize
BU of 2l7t by Molmil
Solution structure of the MFS-bound Sans CEN2 peptide
Descriptor: MFS-bound Sans CEN2 peptide
Authors:Pan, L, Wu, L, Wei, Z, Zhang, M.
Deposit date:2010-12-22
Release date:2011-03-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of MyTH4-FERM domains in myosin VIIa tail bound to cargo.
Science, 331, 2011
2LO1
DownloadVisualize
BU of 2lo1 by Molmil
NMR structure of the protein BC008182, a DNAJ-like domain from Homo sapiens
Descriptor: DnaJ homolog subfamily A member 1
Authors:Dutta, S.K, Serrano, P, Geralt, M, Wuthrich, K, Joint Center for Structural Genomics (JCSG), Partnership for Stem Cell Biology (STEMCELL)
Deposit date:2012-01-09
Release date:2012-02-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of the protein BC008182, DNAJ homolog from Homo sapiens
To be Published
2LSP
DownloadVisualize
BU of 2lsp by Molmil
solution structures of BRD4 second bromodomain with NF-kB-K310ac peptide
Descriptor: Bromodomain-containing protein 4, NF-kB-K310ac peptide
Authors:Zhang, G, Liu, R, Zhong, Y, Plotnikov, A.N, Zhang, W, Rusinova, E, Gerona-Nevarro, G, Moshkina, N, Joshua, J, Chuang, P.Y, Ohlmeyer, M, He, J, Zhou, M.-M.
Deposit date:2012-05-03
Release date:2012-07-18
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Down-regulation of NF-kappa B transcriptional activity in HIV-associated kidney disease by BRD4 inhibition.
J.Biol.Chem., 287, 2012
2LM7
DownloadVisualize
BU of 2lm7 by Molmil
NMR structure of the C-terminal domain of VP7 in membrane mimicking micelles
Descriptor: Outer capsid glycoprotein VP7
Authors:Elaid, S, Libersou, S, Ouldali, M, Morellet, N, Lepault, J, Bouaziz, S.
Deposit date:2011-11-23
Release date:2012-10-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of the C-terminal domain of VP7 in membrane mimicking micelles
To be Published
6MP5
DownloadVisualize
BU of 6mp5 by Molmil
Crystal structure of native human sulfide:quinone oxidoreductase
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Sulfide:quinone oxidoreductase, mitochondrial
Authors:Jackson, M.R, Jorns, M.S, Loll, P.J.
Deposit date:2018-10-05
Release date:2019-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:X-Ray Structure of Human Sulfide:Quinone Oxidoreductase: Insights into the Mechanism of Mitochondrial Hydrogen Sulfide Oxidation.
Structure, 27, 2019
5LUR
DownloadVisualize
BU of 5lur by Molmil
An avidin mutant
Descriptor: Avidin, CHLORIDE ION, PROGESTERONE
Authors:Agrawal, N, Lehtonen, S.I, Riihimaki, T.A, Kulomaa, M.S, Hytonen, V.P, Johnson, M.S, Airenne, T.T.
Deposit date:2016-09-09
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An avidin mutant
TO BE PUBLISHED
8XD0
DownloadVisualize
BU of 8xd0 by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH and AKG in the steady stage of reaction
Descriptor: 2-OXOGLUTARIC ACID, Glutamate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase.
Sci Rep, 14, 2024
8XD1
DownloadVisualize
BU of 8xd1 by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP in the steady stage of reaction
Descriptor: Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase.
Sci Rep, 14, 2024
8XD5
DownloadVisualize
BU of 8xd5 by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADP and GLU in the steady stage of reaction
Descriptor: GAMMA-L-GLUTAMIC ACID, Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase.
Sci Rep, 14, 2024
8XCQ
DownloadVisualize
BU of 8xcq by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the initial stage of reaction
Descriptor: GAMMA-L-GLUTAMIC ACID, Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase.
Sci Rep, 14, 2024
9C61
DownloadVisualize
BU of 9c61 by Molmil
Crystal structure of the human LRRK2 WDR domain in complex with CACHE1193-26
Descriptor: (4R)-4-[4-(5-fluoro-1H-indol-3-yl)piperidine-1-carbonyl]piperidin-2-one, Non-specific serine/threonine protein kinase, UNKNOWN ATOM OR ION
Authors:Zeng, H, Dong, A, Kutera, M, Ilyassov, O, Seitova, A, Loppnau, P, Schapira, M, Arrowsmith, C.H, Edwards, A.M, Halabelian, L.
Deposit date:2024-06-07
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the human LRRK2 WDR domain in complex with CACHE1193-26
To be published
8XCU
DownloadVisualize
BU of 8xcu by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH, AKG and GLU in the steady stage of reaction
Descriptor: 2-OXOGLUTARIC ACID, GAMMA-L-GLUTAMIC ACID, Glutamate dehydrogenase, ...
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase.
Sci Rep, 14, 2024
8XCO
DownloadVisualize
BU of 8xco by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADPH in the initial stage of reaction
Descriptor: Glutamate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase.
Sci Rep, 14, 2024
8XD2
DownloadVisualize
BU of 8xd2 by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus incorporating NADP and GLU in the steady stage of reaction
Descriptor: GAMMA-L-GLUTAMIC ACID, Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase.
Sci Rep, 14, 2024
8YLA
DownloadVisualize
BU of 8yla by Molmil
Crystal structures of terpene synthases complexed with a substrate mimic
Descriptor: MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, PYROPHOSPHATE, ...
Authors:Xu, M, Ma, M.
Deposit date:2024-03-05
Release date:2024-04-24
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Insights Into the Terpene Cyclization Domains of Two Fungal Sesterterpene Synthases and Enzymatic Engineering for Sesterterpene Diversification.
Angew.Chem.Int.Ed.Engl., 63, 2024
8XCS
DownloadVisualize
BU of 8xcs by Molmil
Cryo-EM structure of Glutamate dehydrogenase from Thermococcus profundus in complex with NADPH, AKG and NH4 in the initial stage of reaction
Descriptor: 2-OXOGLUTARIC ACID, AMMONIUM ION, Glutamate dehydrogenase, ...
Authors:Wakabayashi, T, Oide, M, Nakasako, M.
Deposit date:2023-12-10
Release date:2023-12-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:CryoEM-sampling of metastable conformations appearing in cofactor-ligand association and catalysis of glutamate dehydrogenase.
Sci Rep, 14, 2024
8WUX
DownloadVisualize
BU of 8wux by Molmil
Cryo-EM structure of H. thermophilus GroEL-GroES bullet complex
Descriptor: Chaperonin GroEL, Co-chaperonin GroES, MAGNESIUM ION, ...
Authors:Liao, Z, Gopalasingam, C.C, Kameya, M, Gerle, C, Shigematsu, H, Ishii, M, Arakawa, T, Fushinobu, S.
Deposit date:2023-10-21
Release date:2024-03-27
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural insights into thermophilic chaperonin complexes.
Structure, 32, 2024
7C64
DownloadVisualize
BU of 7c64 by Molmil
Crystal structure of beta-glycosides-binding protein of ABC transporter in an open state (Form II)
Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CARBON DIOXIDE, ...
Authors:Kanaujia, S.P, Chandravanshi, M, Samanta, R.
Deposit date:2020-05-21
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Conformational Trapping of a beta-Glucosides-Binding Protein Unveils the Selective Two-Step Ligand-Binding Mechanism of ABC Importers.
J.Mol.Biol., 432, 2020
8VDT
DownloadVisualize
BU of 8vdt by Molmil
DNA Ligase 1 with nick DNA 3'rA:T
Descriptor: DNA (5'-D(*GP*TP*CP*CP*GP*AP*CP*TP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA ligase 1, DNA/RNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*T)-R(P*A)-D(P*GP*TP*CP*GP*GP*AP*C)-3'), ...
Authors:KanalElamparithi, B, Gulkis, M, Caglayan, M.
Deposit date:2023-12-17
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structures of LIG1 provide a mechanistic basis for understanding a lack of sugar discrimination against a ribonucleotide at the 3'-end of nick DNA.
J.Biol.Chem., 300, 2024

224004

건을2024-08-21부터공개중

PDB statisticsPDBj update infoContact PDBjnumon