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PDB: 51689 results

6O0F
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Saxiphilin:STX complex, co-crystal
Descriptor: Saxiphilin, [(3aS,4R,10aS)-2,6-diamino-10,10-dihydroxy-3a,4,9,10-tetrahydro-3H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamate
Authors:Yen, T.J, Lolicato, M, Minor, D.L.
Deposit date:2019-02-16
Release date:2019-07-10
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structure of the saxiphilin:saxitoxin (STX) complex reveals a convergent molecular recognition strategy for paralytic toxins.
Sci Adv, 5, 2019
6HT8
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Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 3
Descriptor: 3-benzamido-4-methoxy-~{N}-oxidanyl-benzamide, DIMETHYLFORMAMIDE, GLYCEROL, ...
Authors:Marek, M, Shaik, T.B, Romier, C.
Deposit date:2018-10-03
Release date:2018-10-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Characterization of Histone Deacetylase 8 (HDAC8) Selective Inhibition Reveals Specific Active Site Structural and Functional Determinants.
J. Med. Chem., 61, 2018
7OV9
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Heterodimeric tRNA-Guanine Transglycosylase from mouse, apo-structure
Descriptor: HEXAETHYLENE GLYCOL, Queuine tRNA-ribosyltransferase accessory subunit 2, Queuine tRNA-ribosyltransferase catalytic subunit 1, ...
Authors:Sebastiani, M, Heine, A, Reuter, K.
Deposit date:2021-06-14
Release date:2022-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Biochemical Investigation of the Heterodimeric Murine tRNA-Guanine Transglycosylase.
Acs Chem.Biol., 17, 2022
7OVS
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Heterodimeric murine tRNA-guanine transglycosylase in the presence of Anderson-Evans type (TEW) and Strandberg type polyoxometalate (POM)
Descriptor: 6-tungstotellurate(VI), Queuine tRNA-ribosyltransferase accessory subunit 2, Queuine tRNA-ribosyltransferase catalytic subunit 1, ...
Authors:Sebastiani, M, Heine, A, Reuter, K.
Deposit date:2021-06-15
Release date:2022-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Biochemical Investigation of the Heterodimeric Murine tRNA-Guanine Transglycosylase.
Acs Chem.Biol., 17, 2022
3N5K
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Structure Of The (Sr)Ca2+-ATPase E2-AlF4- Form
Descriptor: ACETATE ION, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
Authors:Bublitz, M, Olesen, C, Poulsen, H, Morth, J.P, Moller, J.V, Nissen, P.
Deposit date:2010-05-25
Release date:2011-06-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ion pathways in the sarcoplasmic reticulum Ca2+-ATPase.
J.Biol.Chem., 288, 2013
8PTU
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2.5 A cryo-EM structure of the in vitro FimD-catalyzed assembly of type 1 pilus rod
Descriptor: Type-1 fimbrial protein, A chain
Authors:Zyla, D, Hospenthal, M, Glockshuber, R, Waksman, G.
Deposit date:2023-07-14
Release date:2024-04-10
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.52 Å)
Cite:The assembly platform FimD is required to obtain the most stable quaternary structure of type 1 pili.
Nat Commun, 15, 2024
6HV5
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Yeast 20S proteasome with human beta2i (1-53) in complex with 4
Descriptor: (2~{S})-~{N}-[(2~{S})-1-[[(2~{S})-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-2-[[(2~{S})-2-azido-3-phenyl-propanoyl]amino]-4-methyl-pentanamide, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2018-10-10
Release date:2019-01-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits.
J.Med.Chem., 62, 2019
6HW7
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BU of 6hw7 by Molmil
Yeast 20S proteasome in complex with 29
Descriptor: CHLORIDE ION, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
Authors:Huber, E.M, Groll, M.
Deposit date:2018-10-11
Release date:2019-01-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-Based Design of Inhibitors Selective for Human Proteasome beta 2c or beta 2i Subunits.
J.Med.Chem., 62, 2019
6QK7
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BU of 6qk7 by Molmil
Elongator catalytic subcomplex Elp123 lobe
Descriptor: 5'-DEOXYADENOSINE, Elongator complex protein 1, Elongator complex protein 2, ...
Authors:Dauden, M.I, Jaciuk, M, Glatt, S.
Deposit date:2019-01-28
Release date:2019-07-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular basis of tRNA recognition by the Elongator complex.
Sci Adv, 5, 2019
6HU2
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Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 11
Descriptor: 4-methyl-~{N}-oxidanyl-3-[(phenylmethyl)amino]benzamide, DIMETHYLFORMAMIDE, GLYCEROL, ...
Authors:Shaik, T.B, Marek, M, Romier, C.
Deposit date:2018-10-05
Release date:2018-10-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.986 Å)
Cite:Characterization of Histone Deacetylase 8 (HDAC8) Selective Inhibition Reveals Specific Active Site Structural and Functional Determinants.
J. Med. Chem., 61, 2018
7ULT
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BU of 7ult by Molmil
Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer Apo-Form.
Descriptor: 2'-O-methyltransferase, FORMIC ACID, Non-structural protein 10, ...
Authors:Minasov, G, Shuvalova, L, Brunzelle, J.S, Rosas-Lemus, M, Kiryukhina, O, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-04-05
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of SARS-CoV-2 Nsp16/10 Heterodimer Apo-Form.
To Be Published
6QK1
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BU of 6qk1 by Molmil
R2-like ligand-binding oxidase Y175F mutant with aerobically reconstituted Mn/Fe cofactor
Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ...
Authors:Griese, J.J, Hogbom, M.
Deposit date:2019-01-28
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.754 Å)
Cite:Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein.
J.Am.Chem.Soc., 142, 2020
1Z30
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BU of 1z30 by Molmil
NMR structure of the apical part of stemloop D from cloverleaf 1 of bovine enterovirus 1 RNA
Descriptor: 5'-R(*GP*GP*CP*GP*UP*UP*CP*GP*UP*UP*AP*GP*AP*AP*CP*GP*UP*C)-3'
Authors:Ihle, Y, Ohlenschlager, O, Duchardt, E, Ramachandran, R, Gorlach, M.
Deposit date:2005-03-10
Release date:2005-04-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:A novel cGUUAg tetraloop structure with a conserved yYNMGg-type backbone conformation from cloverleaf 1 of bovine enterovirus 1 RNA
Nucleic Acids Res., 33, 2005
6UEK
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BU of 6uek by Molmil
Structure of Urocanate Hydratase from Trypanosoma cruzi in complex with NAD+
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Urocanate hydratase
Authors:Boreiko, S, Silva, M, Melo, R.F.P, Silber, A.M, Iulek, J.
Deposit date:2019-09-21
Release date:2020-01-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure of Urocanate Hydratase from the protozoan Trypanosoma cruzi.
Int.J.Biol.Macromol., 146, 2019
1ZCN
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BU of 1zcn by Molmil
human Pin1 Ng mutant
Descriptor: PENTAETHYLENE GLYCOL, PHOSPHATE ION, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
Authors:Jager, M, Zhang, Y, Nguyen, H, Dendel, G, Bowman, M.E, Gruebele, M, Noel, J.P, Kelly, J.W.
Deposit date:2005-04-12
Release date:2006-06-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-function-folding relationship in a WW domain.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6UIE
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BU of 6uie by Molmil
Structure of the cytoplasmic domain of the T3SS sorting platform protein PscK from P. aeruginosa
Descriptor: CHLORIDE ION, Type III export protein PscK
Authors:Muthuramalingam, M, Lovell, S, Battaile, K.P, Picking, W.D.
Deposit date:2019-09-30
Release date:2020-10-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:The Structures of SctK and SctD from Pseudomonas aeruginosa Reveal the Interface of the Type III Secretion System Basal Body and Sorting Platform.
J.Mol.Biol., 432, 2020
1CB1
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BU of 1cb1 by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE OF CA2+-LOADED PORCINE CALBINDIN D9K DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
Descriptor: CALBINDIN D9K
Authors:Akke, M, Drakenberg, T, Chazin, W.J.
Deposit date:1991-12-13
Release date:1993-10-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of Ca(2+)-loaded porcine calbindin D9k determined by nuclear magnetic resonance spectroscopy.
Biochemistry, 31, 1992
6FMG
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BU of 6fmg by Molmil
Structure of the Mannose Transporter IIA Domain from Streptococcus pneumoniae
Descriptor: PTS system mannose-specific transporter subunit IIAB
Authors:Magoch, M, Grudnik, P.
Deposit date:2018-01-31
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the Mannose Transporter IIA Domain from Streptococcus pneumoniae
To Be Published
7XG9
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BU of 7xg9 by Molmil
Crystal structural of methylenetetrahydrofolate reductase from Sphingobium sp. SYK-6
Descriptor: 5,10-methylenetetrahydrofolate reductase, DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Yu, H.Y, Senda, M, Senda, T.
Deposit date:2022-04-04
Release date:2023-04-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structural of methylenetetrahydrofolate reductase from Sphingobium sp. SYK-6
To Be Published
1UK5
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BU of 1uk5 by Molmil
Solution structure of the Murine BAG domain of Bcl2-associated athanogene 3
Descriptor: BAG-family molecular chaperone regulator-3
Authors:Hatta, R, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-19
Release date:2004-02-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The C-terminal BAG domain of BAG5 induces conformational changes of the Hsp70 nucleotide-binding domain for ADP-ATP exchange
Structure, 18, 2010
6O16
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BU of 6o16 by Molmil
Crystal structure of murine DHX37 in complex with RNA
Descriptor: DEAH (Asp-Glu-Ala-His) box polypeptide 37, RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')
Authors:Boneberg, F, Brandmann, T, Kobel, L, van den Heuvel, J, Bargsten, K, Bammert, L, Kutay, U, Jinek, M.
Deposit date:2019-02-18
Release date:2019-04-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.875 Å)
Cite:Molecular mechanism of the RNA helicase DHX37 and its activation by UTP14A in ribosome biogenesis.
Rna, 25, 2019
7UNO
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BU of 7uno by Molmil
Thiol-disulfide oxidoreductase TsdA, C129S mutant, from Corynebacterium diphtheriae
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, TRIETHYLENE GLYCOL, ...
Authors:Osipiuk, J, Reardon-Robinson, M, Nguyen, M.T, Sanchez, B, Ton-That, H, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-04-11
Release date:2022-04-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Thiol-disulfide oxidoreductase in Corynebacterium diphtheriae
To Be Published
7Y52
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BU of 7y52 by Molmil
Crystal structure of peptidyl-tRNA hydrolase from Enterococcus faecium
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Peptidyl-tRNA hydrolase, ...
Authors:Pandey, R, Zohib, M, Mundra, S, Pal, R.K, Arora, A.
Deposit date:2022-06-16
Release date:2024-01-17
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Characterization of structure of peptidyl-tRNA hydrolase from Enterococcus faecium and its inhibition by a pyrrolinone compound.
Int.J.Biol.Macromol., 275, 2024
6QHG
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BU of 6qhg by Molmil
Structure of the cap-binding domain of Rift Valley Fever virus L protein
Descriptor: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, GLYCEROL, PHOSPHATE ION, ...
Authors:Gogrefe, N, Reindl, S, Gunther, S, Rosenthal, M.
Deposit date:2019-01-16
Release date:2019-05-22
Last modified:2019-06-05
Method:X-RAY DIFFRACTION (1.483 Å)
Cite:Structure of a functional cap-binding domain in Rift Valley fever virus L protein.
Plos Pathog., 15, 2019
1CD9
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BU of 1cd9 by Molmil
2:2 COMPLEX OF G-CSF WITH ITS RECEPTOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (G-CSF RECEPTOR), PROTEIN (GRANULOCYTE COLONY-STIMULATING FACTOR)
Authors:Aritomi, M, Kunishima, N, Okamoto, T, Kuroki, R, Ota, Y, Morikawa, K.
Deposit date:1999-03-08
Release date:2000-03-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Atomic structure of the GCSF-receptor complex showing a new cytokine-receptor recognition scheme.
Nature, 401, 1999

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