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PDB: 51964 件

3W5M
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Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Putative rhamnosidase
著者Fujimoto, Z, Jackson, A, Michikawa, M, Maehara, T, Momma, M, Henrissat, B.F, Gilbert, H.J, Kaneko, S.
登録日2013-01-31
公開日2013-03-20
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structure of a Streptomyces avermitilis alpha-L-rhamnosidase reveals a novel carbohydrate-binding module CBM67 within the six-domain arrangement.
J.Biol.Chem., 288, 2013
6NW0
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Crystal Structure Desulfovibrio desulfuricans Nickel-Substituted Rubredoxin
分子名称: NICKEL (II) ION, Rubredoxin
著者Slater, J.W, Marguet, S.C, Gray, M.E, Sotomayor, M, Shafaat, H.S.
登録日2019-02-05
公開日2019-08-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The Power of the Secondary Sphere: Modulating Hydrogenase Activity in Nickel-Substituted Rubredoxin
Acs Catalysis, 2019
8CNY
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Structure of Enterovirus A71 3C protease
分子名称: Protease 3C
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Godoy, A.S, Marples, P.G, Ni, X, Tomlinson, C.W.E, Wild, C, Fearon, D, Walsh, M.A, von Delft, F.
登録日2023-02-24
公開日2023-04-05
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Structure of EV D68 3C protease - to be published
To Be Published
7JSR
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Crystal structure of the large glutamate dehydrogenase composed of 180 kDa subunits from Mycobacterium smegmatis
分子名称: NAD-specific glutamate dehydrogenase
著者Lazaro, M, Melero, R, Huet, C, Lopez-Alonso, J.P, Delgado, S, Dodu, A, Bruch, E.M, Abriata, L.A, Alzari, P.M, Valle, M, Lisa, M.N.
登録日2020-08-15
公開日2021-06-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (6.27 Å)
主引用文献3D architecture and structural flexibility revealed in the subfamily of large glutamate dehydrogenases by a mycobacterial enzyme.
Commun Biol, 4, 2021
6NC5
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Cronobacter sakazakii (Enterobacter sakazakii) Metallo-beta-lactamse HARLDQ motif
分子名称: ACETATE ION, Beta-lactamase, PHOSPHATE ION, ...
著者Monteiro Pedroso, M, Waite, D, Natasa, M, McGeary, R, Guddat, L, Hugenholtz, P, Schenk, G.
登録日2018-12-10
公開日2019-12-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.074 Å)
主引用文献Broad spectrum antibiotic-degrading metallo-beta-lactamases are phylogenetically diverse.
Protein Cell, 11, 2020
6NIA
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Pseudomonas fluorescens isocyanide hydratase at 100 K helical disorder model
分子名称: 1,2-ETHANEDIOL, Isonitrile hydratase InhA
著者Wilson, M.A, Dasgupta, M, van den Bedem, H.
登録日2018-12-26
公開日2019-11-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Mix-and-inject XFEL crystallography reveals gated conformational dynamics during enzyme catalysis.
Proc.Natl.Acad.Sci.USA, 116, 2019
1UHG
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Crystal Structure of S-Ovalbumin At 1.9 Angstrom Resolution
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ovalbumin, ...
著者Yamasaki, M, Takahashi, N, Hirose, M.
登録日2003-07-03
公開日2003-07-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of S-ovalbumin as a Non-loop-inserted Thermostabilized Serpin Form
J.Biol.Chem., 278, 2003
6NJ1
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Crystal structure of class A beta-lactamase from Clostridium kluyveri DSM 555
分子名称: Beta-lactamase, CHLORIDE ION
著者Michalska, K, Welk, L, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2019-01-02
公開日2019-01-16
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (1.399 Å)
主引用文献Crystal structure of class A beta-lactamase from Clostridium kluyveri DSM 555
To Be Published
2YR4
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Crystal structure of L-phenylalanine oxiase from Psuedomonas sp. P-501
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Pro-enzyme of L-phenylalanine oxidase, SULFATE ION
著者Ida, K, Kurabayashi, M, Suguro, M, Suzuki, H.
登録日2007-04-02
公開日2008-04-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of proteolytic activation of L-phenylalanine oxidase from Pseudomonas sp. P-501.
J.Biol.Chem., 283, 2008
7STF
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Structure of KRAS G12V/HLA-A*03:01 in complex with antibody fragment V2
分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, A alpha chain, ...
著者Wright, K.M, Gabelli, S.B, Miller, M.
登録日2021-11-12
公開日2023-05-31
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Hydrophobic interactions dominate the recognition of a KRAS G12V neoantigen.
Nat Commun, 14, 2023
3DM8
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Crystal Structure of Putative Isomerase from Rhodopseudomonas palustris
分子名称: DODECYL NONA ETHYLENE GLYCOL ETHER, uncharacterized protein RPA4348
著者Cymborowski, M, Chruszcz, M, Skarina, T, Kagan, O, Savchenko, A, Edwards, A.M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2008-06-30
公開日2008-08-05
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Putative Isomerase from Rhodopseudomonas palustris
To be Published
6NLN
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1.60 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor (analog 16)
分子名称: 4-{[3-(3-hydroxyphenyl)propyl]amino}-1H-isoindole-1,3(2H)-dione, FE (II) ION, Ferroxidase, ...
著者Lovell, S, Punchi-Hewage, A, Battaile, K.P, Yao, H, Nammalwar, B, Gnanasekaran, K.K, Bunce, R.A, Reitz, A.B, Rivera, M.
登録日2019-01-08
公開日2019-05-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Small Molecule Inhibitors of the BfrB-Bfd Interaction Decrease Pseudomonas aeruginosa Fitness and Potentiate Fluoroquinolone Activity.
J.Am.Chem.Soc., 141, 2019
3Q5I
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Crystal Structure of PBANKA_031420
分子名称: CALCIUM ION, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Wernimont, A.K, Hutchinson, A, Sullivan, H, Panico, E, Crombet, L, Cossar, D, Hassani, A, Vedadi, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Hui, R, Neculai, A.M, Amani, M, Structural Genomics Consortium (SGC)
登録日2010-12-28
公開日2011-06-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of CDPK1 from Plasmodium Bergheii, PBANKA_031420
To be Published
5HCB
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Globular Domain of the Entamoeba histolytica calreticulin in complex with glucose
分子名称: CALCIUM ION, CHLORIDE ION, Calreticulin, ...
著者Moreau, C.P, Cioci, G, Ianello, M, Laffly, E, Chouquet, A, Ferreira, A, Thielens, N.M, Gaboriaud, C.
登録日2016-01-04
公開日2016-08-31
最終更新日2017-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of parasite calreticulins provide insights into their flexibility and dual carbohydrate/peptide-binding properties.
IUCrJ, 3, 2016
6GLZ
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[FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant C299D
分子名称: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
著者Duan, J, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
登録日2018-05-24
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
7TA8
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NMR structure of crosslinked cyclophilin A
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Lu, M, Toptygin, D, Xiang, Y, Shi, Y, Schwieters, C.D, Lipinski, E.C, Ahn, J, Byeon, I.-J.L, Gronenborn, A.M.
登録日2021-12-20
公開日2022-06-01
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献The Magic of Linking Rings: Discovery of a Unique Photoinduced Fluorescent Protein Crosslink.
J.Am.Chem.Soc., 144, 2022
7T4V
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Crystal Structure of cGMP-dependent Protein Kinase
分子名称: 4-({(2S,3S)-3-[(1S)-1-(3,5-dichlorophenyl)-2-hydroxyethoxy]-2-phenylpiperidin-1-yl}methyl)-3-methylbenzoic acid, CHLORIDE ION, cGMP-dependent protein kinase 1
著者Zebisch, M, Silvestre, L, Fischmann, T.O.
登録日2021-12-10
公開日2023-06-14
最終更新日2023-07-12
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Selective small molecule activation of PKG1alpha: structure and function
Commun Biol, 2023
6NRV
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Cryo-EM reconstruction of CFA/I pili
分子名称: CFA/I fimbrial subunit B
著者Zheng, W, Andersson, M, Bullitt, E, Egelman, E.H.
登録日2019-01-24
公開日2019-09-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-EM structure of the CFA/I pilus rod.
Iucrj, 6, 2019
7T4W
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Crystal Structure of cGMP-dependent Protein Kinase
分子名称: (2R)-2-({(2S,3S)-1-[(1H-benzimidazol-2-yl)methyl]-2-phenylpiperidin-3-yl}oxy)-2-(3,5-dichlorophenyl)ethan-1-ol, CHLORIDE ION, cGMP-dependent protein kinase 1
著者Zebisch, M, Silvestre, L, Fischmann, T.O.
登録日2021-12-10
公開日2023-06-14
最終更新日2023-07-12
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Selective small molecule activation of PKG1alpha: structure and function
Commun Biol, 2023
6HLT
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Crystal structure of human ACBD3 GOLD domain in complex with 3A protein of rhinovirus-14 (HRV14)
分子名称: Genome polyprotein, Golgi resident protein GCP60
著者Klima, M, Boura, E.
登録日2018-09-11
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.815 Å)
主引用文献Convergent evolution in the mechanisms of ACBD3 recruitment to picornavirus replication sites.
Plos Pathog., 15, 2019
6NIM
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Trypanosoma cruzi - BDF2, TcCLB.506553.20, solved with bromosporine
分子名称: Bromodomain factor 2 protein, Bromosporine, SULFATE ION, ...
著者Lin, Y.H, Dong, A, Tempel, W, Loppnau, P, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Hui, R, Vedadi, M, Harding, R, Structural Genomics Consortium (SGC)
登録日2018-12-29
公開日2019-01-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Trypanosoma cruzi - BDF2, TcCLB.506553.20, solved with bromosporine
to be published
6HLV
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Crystal structure of human ACBD3 GOLD domain in complex with 3A protein of poliovirus-1 (L24A mutant)
分子名称: 3A protein, Golgi resident protein GCP60
著者Klima, M, Boura, E.
登録日2018-09-11
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Convergent evolution in the mechanisms of ACBD3 recruitment to picornavirus replication sites.
Plos Pathog., 15, 2019
6HMF
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D-family DNA polymerase - DP1 subunit (3'-5' proof-reading exonuclease) H451 proof-reading deficient variant
分子名称: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
著者Raia, P, Delarue, M, Sauguet, L.
登録日2018-09-12
公開日2019-01-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the DP1-DP2 PolD complex bound with DNA and its implications for the evolutionary history of DNA and RNA polymerases.
PLoS Biol., 17, 2019
7T4U
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Crystal Structure of cGMP-dependent Protein Kinase
分子名称: 3-amino-4-({(2S,3S)-3-[(1S)-1-(3,5-dichlorophenyl)-2-hydroxyethoxy]-2-phenylpiperidin-1-yl}methyl)benzoic acid, cGMP-dependent protein kinase 1
著者Zebisch, M, Silvestre, L, Fischmann, T.O.
登録日2021-12-10
公開日2023-06-14
最終更新日2023-07-12
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Selective small molecule activation of PKG1alpha: structure and function
Commun Biol, 2023
6NLG
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1.50 A resolution structure of BfrB (C89S/K96C) from Pseudomonas aeruginosa in complex with a small molecule fragment (analog 1)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-hydroxy-1H-isoindole-1,3(2H)-dione, Bacterioferritin, ...
著者Lovell, S, Punchi-Hewage, A, Battaile, K.P, Yao, H, Nammalwar, B, Gnanasekaran, K.K, Bunce, R.A, Reitz, A.B, Rivera, M.
登録日2019-01-08
公開日2019-05-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Small Molecule Inhibitors of the BfrB-Bfd Interaction Decrease Pseudomonas aeruginosa Fitness and Potentiate Fluoroquinolone Activity.
J.Am.Chem.Soc., 141, 2019

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