Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51938 件

1HVX
DownloadVisualize
BU of 1hvx by Molmil
BACILLUS STEAROTHERMOPHILUS ALPHA-AMYLASE
分子名称: ALPHA-AMYLASE, CALCIUM ION, SODIUM ION
著者Suvd, D, Fujimoto, Z, Takase, K, Matsumura, M, Mizuno, H.
登録日2001-01-08
公開日2001-01-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Bacillus stearothermophilus alpha-amylase: possible factors determining the thermostability.
J.Biochem., 129, 2001
6WZ5
DownloadVisualize
BU of 6wz5 by Molmil
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
分子名称: DNA (153-MER), Histone H2A, Histone H2B 1.1, ...
著者Halic, M, Bilokapic, S.
登録日2020-05-13
公開日2020-09-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Bridging of DNA breaks activates PARP2-HPF1 to modify chromatin.
Nature, 585, 2020
6TS5
DownloadVisualize
BU of 6ts5 by Molmil
Coagulation factor XI protease domain in complex with active site inhibitor
分子名称: 2-[2-[3-[(3~{S})-3-azanyl-2,3-dihydro-1-benzofuran-5-yl]-5-propan-2-yl-phenyl]ethoxy]-3-methoxy-benzoic acid, Coagulation factor XI, DIMETHYL SULFOXIDE, ...
著者Renatus, M, Schiering, N.
登録日2019-12-20
公開日2020-07-08
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Structure-Based Design and Preclinical Characterization of Selective and Orally Bioavailable Factor XIa Inhibitors: Demonstrating the Power of an Integrated S1 Protease Family Approach.
J.Med.Chem., 63, 2020
6WGP
DownloadVisualize
BU of 6wgp by Molmil
The crystal structure of a beta lactamase from Xanthomonas campestris pv. campestris str. ATCC 33913
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-lactamase, ...
著者Tan, K, Wu, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2020-04-06
公開日2020-04-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The crystal structure of a beta lactamase from Xanthomonas campestris pv. campestris str. ATCC 33913
To Be Published
6WH3
DownloadVisualize
BU of 6wh3 by Molmil
Capsid structure of Penaeus monodon metallodensovirus at pH 8.2
分子名称: CALCIUM ION, Penaeus monodon metallodensovirus major capsid protein
著者Penzes, J.J, Pham, H.T, Chipman, P, Bhattacharya, N, McKenna, R, Agbandje-McKenna, M, Tijssen, P.
登録日2020-04-07
公開日2020-04-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Molecular biology and structure of a novel penaeid shrimp densovirus elucidate convergent parvoviral host capsid evolution.
Proc.Natl.Acad.Sci.USA, 117, 2020
4LJI
DownloadVisualize
BU of 4lji by Molmil
Crystal structure at 1.5 angstrom resolution of the PsbV2 cytochrome from the cyanobacterium thermosynechococcus elongatus
分子名称: CHLORIDE ION, Cytochrome c-550-like protein, HEME C
著者Suga, M, Lai, T.-L, Sugiura, M, Shen, J.-R, Boussac, A.
登録日2013-07-04
公開日2013-08-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.508 Å)
主引用文献Crystal structure at 1.5 angstrom resolution of the PsbV2 cytochrome from the cyanobacterium Thermosynechococcus elongatus
Febs Lett., 587, 2013
2VXJ
DownloadVisualize
BU of 2vxj by Molmil
CRYSTAL STRUCTURE OF PA-IL LECTIN COMPLEXED WITH AGAL13BGAL14GLC AT 1.9 A RESOLUTION
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, PA-I GALACTOPHILIC LECTIN, ...
著者Blanchard, B, Nurisso, A, Hollville, E, Tetaud, C, Wiels, J, Pokorna, M, Wimmerova, M, Varrot, A, Imberty, A.
登録日2008-07-04
公開日2008-09-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Basis of the Preferential Binding for Globo-Series Glycosphingolipids Displayed by Pseudomonas Aeruginosa Lectin I.
J.Mol.Biol., 383, 2008
3WBH
DownloadVisualize
BU of 3wbh by Molmil
Structural characteristics of alkaline phosphatase from a moderately halophilic bacteria Halomonas sp.593
分子名称: Alkaline phosphatase, CHLORIDE ION, MAGNESIUM ION, ...
著者Arai, S, Yonezawa, Y, Ishibashi, M, Matsumoto, F, Tamada, T, Tokunaga, H, Tokunaga, M, Kuroki, R.
登録日2013-05-17
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural characteristics of alkaline phosphatase from the moderately halophilic bacterium Halomonas sp. 593.
Acta Crystallogr.,Sect.D, 70, 2014
6RO1
DownloadVisualize
BU of 6ro1 by Molmil
X-ray crystal structure of the MTR4 NVL complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Exosome RNA helicase MTR4, ...
著者Lingaraju, M, Langer, L.M, Basquin, J, Falk, S, Conti, E.
登録日2019-05-10
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.07 Å)
主引用文献The MTR4 helicase recruits nuclear adaptors of the human RNA exosome using distinct arch-interacting motifs.
Nat Commun, 10, 2019
6H67
DownloadVisualize
BU of 6h67 by Molmil
Yeast RNA polymerase I elongation complex stalled by cyclobutane pyrimidine dimer (CPD)
分子名称: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
著者Sanz-Murillo, M, Xu, J, Gil-Carton, D, Wang, D, Fernandez-Tornero, C.
登録日2018-07-26
公開日2018-08-29
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of RNA polymerase I stalling at UV light-induced DNA damage.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6WNR
DownloadVisualize
BU of 6wnr by Molmil
E. coli ATP synthase State 3b
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Stewart, A.G, Sobti, M, Walshe, J.L.
登録日2020-04-23
公開日2020-06-03
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures provide insight into how E. coli F1FoATP synthase accommodates symmetry mismatch.
Nat Commun, 11, 2020
2VSX
DownloadVisualize
BU of 2vsx by Molmil
Crystal Structure of a Translation Initiation Complex
分子名称: ADENOSINE MONOPHOSPHATE, ATP-DEPENDENT RNA HELICASE EIF4A, EUKARYOTIC INITIATION FACTOR 4F SUBUNIT P150
著者Schutz, P, Bumann, M, Oberholzer, A.E, Bieniossek, C, Altmann, M, Trachsel, H, Baumann, U.
登録日2008-04-30
公開日2008-06-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of the Yeast Eif4A-Eif4G Complex: An RNA-Helicase Controlled by Protein-Protein Interactions.
Proc.Natl.Acad.Sci.USA, 105, 2008
2W3Y
DownloadVisualize
BU of 2w3y by Molmil
Structure of the Evf virulence factor
分子名称: PALMITIC ACID, VIRULENCE FACTOR
著者Quevillon-Cheruel, S, Leulliot, N, Acosta Muniz C, C, Vincent, M, Gallay, J, Argentini, M, Cornu, D, Boccard, F, Lemaitre, B, van Tilbeurgh, H.
登録日2008-11-17
公開日2008-12-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Evf, a Virulence Factor Produced by the Drosophila Pathogen Erwinia Carotovora is a S-Palmitoylated Protein with a New Fold that Binds to Lipid Vesicles.
J.Biol.Chem., 284, 2009
6RXM
DownloadVisualize
BU of 6rxm by Molmil
Crystal structure of CobB Ac2 (A76G, I131C, V162G) in complex with H4K16-Acetyl peptide
分子名称: Histone H4, NAD-dependent protein deacylase, ZINC ION
著者Spinck, M, Gasper, R, Neumann, H.
登録日2019-06-08
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Evolved, Selective Erasers of Distinct Lysine Acylations.
Angew.Chem.Int.Ed.Engl., 59, 2020
6WPG
DownloadVisualize
BU of 6wpg by Molmil
Structural Basis of Salicylic Acid Perception by Arabidopsis NPR Proteins
分子名称: 2-HYDROXYBENZOIC ACID, Regulatory protein NPR4
著者Wang, W, Withers, J, Li, H, Zwack, P.J, Rusnac, D.V, Shi, H, Liu, L, Yan, S, Hinds, T.R, Guttman, M, Dong, X, Zheng, N.
登録日2020-04-27
公開日2020-08-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.283 Å)
主引用文献Structural basis of salicylic acid perception by Arabidopsis NPR proteins.
Nature, 586, 2020
2W5J
DownloadVisualize
BU of 2w5j by Molmil
Structure of the c14-rotor ring of the proton translocating chloroplast ATP synthase
分子名称: ATP SYNTHASE C CHAIN, CHLOROPLASTIC
著者Vollmar, M, Schlieper, D, Winn, M, Buechner, C, Groth, G.
登録日2008-12-10
公開日2009-05-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of the c14 rotor ring of the proton translocating chloroplast ATP synthase.
J. Biol. Chem., 284, 2009
3A4T
DownloadVisualize
BU of 3a4t by Molmil
Crystal structure of aTrm4 from M.jannaschii with sinefungin
分子名称: Putative methyltransferase MJ0026, SINEFUNGIN
著者Hirano, M, Kuratani, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-07-14
公開日2010-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of Methanocaldococcus jannaschii Trm4 complexed with sinefungin.
J.Mol.Biol., 401, 2010
6RU8
DownloadVisualize
BU of 6ru8 by Molmil
Crystal structure of Casein Kinase I delta (CK1d) in complex with triple phosphorylated p63 PAD3P peptide
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Casein kinase I isoform delta, ...
著者Chaikuad, A, Tuppi, M, Gebel, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Dotsch, V, Knapp, S, Structural Genomics Consortium (SGC)
登録日2019-05-27
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献p63 uses a switch-like mechanism to set the threshold for induction of apoptosis.
Nat.Chem.Biol., 16, 2020
5DQ2
DownloadVisualize
BU of 5dq2 by Molmil
Endothiapepsin in complex with fragment 48
分子名称: 1,2-ETHANEDIOL, Endothiapepsin, GLYCEROL, ...
著者Radeva, N, Uehlein, M, Weiss, M, Heine, A, Klebe, G.
登録日2015-09-14
公開日2016-09-28
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.514 Å)
主引用文献Crystallographic Fragment Screening of an Entire Library
To Be Published
6X0V
DownloadVisualize
BU of 6x0v by Molmil
Structure of MZT2/GCP-NHD and CDK5Rap2 at position 13 of the gamma-TuRC
分子名称: Centrosome protein Cep215, Gamma-tubulin complex component 2, Mitotic-spindle organizing protein 2A
著者Wieczorek, M, Huang, T.-L, Urnavicius, L, Hsia, K.-C, Kapoor, T.M.
登録日2020-05-17
公開日2020-07-22
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献MZT Proteins Form Multi-Faceted Structural Modules in the gamma-Tubulin Ring Complex.
Cell Rep, 31, 2020
6H3E
DownloadVisualize
BU of 6h3e by Molmil
Receptor-bound Ghrelin conformation
分子名称: Appetite-regulating hormone, octan-1-amine
著者Ferre, G, Damian, M, M'Kadmi, C, Saurel, O, Czaplicki, G, Demange, P, Marie, J, Fehrentz, J.A, Baneres, J.L, Milon, A.
登録日2018-07-18
公開日2019-07-24
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structure and dynamics of G protein-coupled receptor-bound ghrelin reveal the critical role of the octanoyl chain.
Proc.Natl.Acad.Sci.USA, 116, 2019
6X24
DownloadVisualize
BU of 6x24 by Molmil
Structural basis of plant blue light photoreceptor
分子名称: Cryptochrome-2, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL
著者Palayam, M, Ganapathy, J, Guercio, M.A, Shabek, N.
登録日2020-05-19
公開日2020-12-16
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural insights into photoactivation of plant Cryptochrome-2.
Commun Biol, 4, 2021
6S0G
DownloadVisualize
BU of 6s0g by Molmil
Crystal structure of ene-reductase GsOYE from Galdieria sulphuraria
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
著者Robescu, M.R, Niero, M, Hall, M, Bergantino, E, Cendron, L.
登録日2019-06-14
公開日2020-01-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Two new ene-reductases from photosynthetic extremophiles enlarge the panel of old yellow enzymes: CtOYE and GsOYE.
Appl.Microbiol.Biotechnol., 104, 2020
6RZ9
DownloadVisualize
BU of 6rz9 by Molmil
Crystal structure of the human cysteinyl leukotriene receptor 2 in complex with ONO-2770372
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2~{S})-8-[[4-[4-(5-fluoranyl-2-methyl-phenyl)butoxy]phenyl]carbonylamino]-4-(4-oxidanyl-4-oxidanylidene-butyl)-2,3-dih ydro-1,4-benzoxazine-2-carboxylic acid, CHOLESTEROL, ...
著者Gusach, A, Luginina, A, Marin, E, Brouillette, R.L, Besserer-Offroy, E, Longpre, J.M, Ishchenko, A, Popov, P, Fujimoto, T, Maruyama, T, Stauch, B, Ergasheva, M, Romanovskaya, D, Stepko, A, Kovalev, K, Shevtsov, M, Gordeliy, V, Han, G.W, Sarret, P, Katritch, V, Borshchevskiy, V, Mishin, A, Cherezov, V.
登録日2019-06-12
公開日2019-12-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.73 Å)
主引用文献Structural basis of ligand selectivity and disease mutations in cysteinyl leukotriene receptors.
Nat Commun, 10, 2019
3UNE
DownloadVisualize
BU of 3une by Molmil
Mouse constitutive 20S proteasome
分子名称: Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, Proteasome subunit alpha type-3, ...
著者Huber, E, Basler, M, Schwab, R, Heinemeyer, W, Kirk, C, Groettrup, M, Groll, M.
登録日2011-11-15
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Immuno- and constitutive proteasome crystal structures reveal differences in substrate and inhibitor specificity.
Cell(Cambridge,Mass.), 148, 2012

225681

件を2024-10-02に公開中

PDB statisticsPDBj update infoContact PDBjnumon