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PDB: 52230 件

8H6Q
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Class I sesquiterpene synthase BCBOT2 (apo)
分子名称: Presilphiperfolan-8-beta-ol synthase
著者Lou, T.T, Ma, M.
登録日2022-10-18
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Insights into Three Sesquiterpene Synthases for the Biosynthesis of Tricyclic Sesquiterpenes and Chemical Space Expansion by Structure-Based Mutagenesis.
J.Am.Chem.Soc., 2023
8H6U
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Class I sesquiterpene synthase BCBOT2 (complex)
分子名称: MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, PYROPHOSPHATE 2-, ...
著者Lou, T.T, Ma, M.
登録日2022-10-18
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Structural Insights into Three Sesquiterpene Synthases for the Biosynthesis of Tricyclic Sesquiterpenes and Chemical Space Expansion by Structure-Based Mutagenesis.
J.Am.Chem.Soc., 2023
8H4P
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class I sesquiterpene synthase
分子名称: Longiborneol synthase CLM1, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, ...
著者Li, A.N, Lou, T.T, Ma, M.
登録日2022-10-11
公開日2023-08-23
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural Insights into Three Sesquiterpene Synthases for the Biosynthesis of Tricyclic Sesquiterpenes and Chemical Space Expansion by Structure-Based Mutagenesis.
J.Am.Chem.Soc., 2023
8H72
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Class I sesquiterpene synthase DbPROS (complex)
分子名称: Delta(6)-protoilludene synthase K435DRAFT_659367, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium
著者Lou, T.T, Ma, M.
登録日2022-10-18
公開日2023-08-23
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural Insights into Three Sesquiterpene Synthases for the Biosynthesis of Tricyclic Sesquiterpenes and Chemical Space Expansion by Structure-Based Mutagenesis.
J.Am.Chem.Soc., 2023
5YP2
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Crystal structure of dipeptidyl peptidase IV (DPP IV) with DPP4 inhibitor from Pseudoxanthomonas mexicana WO24
分子名称: (2S,5R)-1-[2-[[1-(hydroxymethyl)cyclopentyl]amino]ethanoyl]pyrrolidine-2,5-dicarbonitrile, Dipeptidyl aminopeptidase 4, GLYCEROL
著者Roppongi, S, Suzuki, Y, Tateoka, C, Fuimoto, M, Morisawa, S, Iizuka, I, Nakamura, A, Honma, N, Shida, Y, Ogasawara, W, Tanaka, N, Sakamoto, Y, Nonaka, T.
登録日2017-11-01
公開日2018-02-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues.
Sci Rep, 8, 2018
8H25
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Lacticaseibacillus casei GH35 beta-galactosidase LBCZ_0230
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Beta-galactosidase, DI(HYDROXYETHYL)ETHER, ...
著者Saburi, W, Ota, T, Kato, K, Tagami, T, Yamashita, K, Yao, M, Mori, H.
登録日2022-10-04
公開日2023-08-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.295 Å)
主引用文献Function and Structure of Lacticaseibacillus casei GH35 beta-Galactosidase LBCZ_0230 with High Hydrolytic Activity to Lacto- N -biose I and Galacto- N -biose.
J Appl Glycosci (1999), 70, 2023
7CW2
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Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-263 (subregion around icosahedral 5-fold vertex)
分子名称: Capsid protein, E1 glycoprotein, E2 glycoprotein, ...
著者Zhou, Q.F, Fox, J.M, Earnest, J.T, Ng, T.S, Kim, A.S, Fibriansah, G, Kostyuchenko, V.A, Shu, B, Diamond, M.S, Lok, S.M.
登録日2020-08-27
公開日2020-11-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structural basis of Chikungunya virus inhibition by monoclonal antibodies.
Proc.Natl.Acad.Sci.USA, 117, 2020
8VSK
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Crystal structure of Dehaloperoxidase A in complex with substrate 2,4-dibromophenol
分子名称: 2,4-bis(bromanyl)phenol, DI(HYDROXYETHYL)ETHER, Dehaloperoxidase A, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-01-24
公開日2024-07-17
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.515 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 63, 2024
8VKD
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Crystal structure of dehaloperoxidase A in complex with substrate 4-nitrocatechol
分子名称: 4-NITROCATECHOL, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-01-08
公開日2024-07-17
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 63, 2024
8VZR
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Crystal structure of dehaloperoxidase A in complex with substrate 4-bromo-o-cresol
分子名称: 4-bromo-2-methylphenol, DI(HYDROXYETHYL)ETHER, Dehaloperoxidase A, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-02-12
公開日2024-07-17
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 63, 2024
7CVZ
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Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-263
分子名称: Capsid protein, E1 glycoprotein, E2 glycoprotein, ...
著者Zhou, Q.F, Fox, J.M, Earnest, J.T, Ng, T.S, Kim, A.S, Fibriansah, G, Kostyuchenko, V.A, Shu, B, Diamond, M.S, Lok, S.M.
登録日2020-08-27
公開日2020-11-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structural basis of Chikungunya virus inhibition by monoclonal antibodies.
Proc.Natl.Acad.Sci.USA, 117, 2020
8VKC
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Crystal structure of dehaloperoxidase A in complex with substrate 4-nitrophenol
分子名称: Dehaloperoxidase A, GLYCEROL, P-NITROPHENOL, ...
著者Aktar, M.S, de Serrano, V.S, Ghiladi, R.A, Franzen, S.
登録日2024-01-08
公開日2024-07-17
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural Comparison of Substrate Binding Sites in Dehaloperoxidase A and B.
Biochemistry, 63, 2024
7CVY
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Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-124
分子名称: Capsid protein, E1 glycoprotein, E2 glycoprotein, ...
著者Zhou, Q.F, Fox, J.M, Earnest, J.T, Ng, T.S, Kim, A.S, Fibriansah, G, Kostyuchenko, V.A, Shu, B, Diamond, M.S, Lok, S.M.
登録日2020-08-27
公開日2020-11-04
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (5.2 Å)
主引用文献Structural basis of Chikungunya virus inhibition by monoclonal antibodies.
Proc.Natl.Acad.Sci.USA, 117, 2020
8VWR
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Structure of steroid hydratase from Comamonas testosteroni
分子名称: Acyl dehydratase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Schroeter, K.L, Forrester, T.J.B, Kimber, M.S, Seah, S.Y.K.
登録日2024-02-02
公開日2024-07-17
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Shy is a proteobacterial steroid hydratase which catalyzes steroid side chain degradation without requiring a catalytically inert partner domain.
J.Biol.Chem., 300, 2024
8GVD
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BU of 8gvd by Molmil
SARS-CoV-2 Mpro in complex with D-4-38
分子名称: 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, 3C-like proteinase nsp5
著者Liu, M, Huang, H.
登録日2022-09-14
公開日2023-09-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献SARS-CoV-2 Mpro in complex with D-4-38
To Be Published
8GX3
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The crystal structure of human Calpain-1 protease core in complex with 14c
分子名称: CALCIUM ION, Calpain-1 catalytic subunit, N-[(2S)-3-cyclohexyl-1-[[(2S,3S)-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-benzofuran-2-carboxamide
著者Zhao, Y, Zhao, J, Shao, M, Yang, H, Rao, Z.
登録日2022-09-18
公開日2023-09-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献The crystal structure of human Calpain-1 protease core in complex with 14c
To Be Published
5YJI
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BU of 5yji by Molmil
Co-crystal structure of Mouse Nicotinamide N-methyltransferase (NNMT) with small molecule analog of Nicotinamide
分子名称: 6-methoxy-1-methyl-2H-pyridine-3-carboxamide, Nicotinamide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Birudukota, S, Swaminathan, S, Thakur, M.K, Parveen, R, Kandan, S, Hallur, M.S, Rajagopal, S, Ruf, S, Dhakshinamoorthy, S, Kannt, A, Gosu, R.
登録日2017-10-10
公開日2018-03-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献A small molecule inhibitor of Nicotinamide N-methyltransferase for the treatment of metabolic disorders.
Sci Rep, 8, 2018
8GVY
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SARS CoV-2 Mpro in complex with D-3-149
分子名称: 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE, 3C-like proteinase nsp5
著者Liu, M, Huang, H.
登録日2022-09-16
公開日2023-09-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献SARS CoV-2 Mpro in complex with D-3-149
To Be Published
8GX2
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The crystal structure of human CtsL in complex with 14c
分子名称: DIMETHYL SULFOXIDE, N-[(2S)-3-cyclohexyl-1-[[(2S,3S)-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-benzofuran-2-carboxamide, Procathepsin L
著者Zhao, Y, Shao, M, Zhao, J, Yang, H, Rao, Z.
登録日2022-09-18
公開日2023-09-20
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of human CtsL in complex with 14a
To Be Published
7WCQ
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Crystal structure of HIV-1 protease in complex with lactam derivative 1
分子名称: (3R,4R)-3-[(4-fluorophenyl)methyl]-1-[(4-methoxyphenyl)methyl]-3-(4-methylsulfonylphenyl)-4-oxidanyl-pyrrolidin-2-one, Protease
著者Kojima, E, Iimuro, A, Nakajima, M, Kinuta, H, Asada, N, Sako, Y, Nakata, Z, Uemura, K, Arita, S, Miki, S, Wakasa-Morimoto, C, Tachibana, Y, Fumoto, M.
登録日2021-12-20
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.011 Å)
主引用文献Pocket-to-Lead: Structure-Based De Novo Design of Novel Non-peptidic HIV-1 Protease Inhibitors Using the Ligand Binding Pocket as a Template.
J.Med.Chem., 65, 2022
7WBS
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Crystal structure of HIV-1 protease in complex with lactam derivative 2
分子名称: (3~{R},4~{R})-1-[(4-methoxyphenyl)methyl]-3-(3-methylbutyl)-3-[4-methylsulfonyl-2-[(2~{S})-1-oxidanylpropan-2-yl]oxy-phenyl]-4-oxidanyl-pyrrolidin-2-one, GLYCEROL, Protease
著者Kojima, E, Iimuro, A, Nakajima, M, Kinuta, H, Asada, N, Sako, Y, Nakata, Z, Uemura, K, Arita, S, Miki, S, Wakabayashi-Morimoto, C, Tachibana, Y, Fumoto, M.
登録日2021-12-17
公開日2022-11-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Pocket-to-Lead: Structure-Based De Novo Design of Novel Non-peptidic HIV-1 Protease Inhibitors Using the Ligand Binding Pocket as a Template.
J.Med.Chem., 65, 2022
8GXI
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The crystal structure of SARS-CoV-2 main protease in complex with 14c
分子名称: 3C-like proteinase nsp5, N-[(2S)-3-cyclohexyl-1-[[(2S,3R)-4-(cyclopropylamino)-3-oxidanyl-4-oxidanylidene-1-[(3S)-2-oxidanylidenepiperidin-3-yl]butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-1-benzofuran-2-carboxamide
著者Zhao, Y, Zhao, J, Shao, M, Yang, H, Rao, Z.
登録日2022-09-20
公開日2023-09-27
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献The crystal structure of SARS-CoV-2 main protease in complex with 14c
To Be Published
5YJF
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Co-crystal structure of Human Nicotinamide N-methyltransferase (NNMT) with small molecule analog of Nicotinamide
分子名称: 6-methoxy-1-methyl-2H-pyridine-3-carboxamide, Nicotinamide N-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Swaminathan, S, Birudukota, S, Thakur, M.K, Parveen, R, Kandan, S, Hallur, M.S, Rajagopal, S, Ruf, S, Dhakshinamoorthy, S, Kannt, A, Gosu, R.
登録日2017-10-10
公開日2018-03-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献A small molecule inhibitor of Nicotinamide N-methyltransferase for the treatment of metabolic disorders.
Sci Rep, 8, 2018
8GWJ
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SARS CoV-2 Mpro 1-302 C145A in complex with peptide 7
分子名称: Replicase polyprotein 1ab, VAL-LYS-LEU-GLN-ALA-VAL-PHE-ARG
著者Liu, M, Huang, H.
登録日2022-09-17
公開日2023-09-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献SARS CoV-2 Mpro 1-302 C145A in complex with peptide 7
To Be Published
5YKC
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crystal structure of H5 hemagglutinin from A/chicken/Taiwan/0502/2012
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin
著者Lin, T.H, Lee, M.S, Wu, W.G.
登録日2017-10-13
公開日2018-10-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.823 Å)
主引用文献crystal structure of H5 hemagglutinin from A/chicken/Taiwan/0502/2012
To Be Published

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件を2024-11-06に公開中

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