Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52230 件

7Q0F
DownloadVisualize
BU of 7q0f by Molmil
Structure of Candida albicans 80S ribosome in complex with phyllanthoside
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
著者Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-14
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7PZY
DownloadVisualize
BU of 7pzy by Molmil
Structure of the vacant Candida albicans 80S ribosome
分子名称: 1,4-DIAMINOBUTANE, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-13
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q08
DownloadVisualize
BU of 7q08 by Molmil
Structure of Candida albicans 80S ribosome in complex with cycloheximide
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
著者Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-14
公開日2022-05-25
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.56 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7UFS
DownloadVisualize
BU of 7ufs by Molmil
Cryo-EM Structure of Bl_Man38B at 3.4 A
分子名称: Alpha-mannosidase, ZINC ION
著者Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V.
登録日2022-03-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM Structure of Bl_Man38B at 3.4 A
Nat.Chem.Biol., 2022
8WKZ
DownloadVisualize
BU of 8wkz by Molmil
Crystal structure of the Melanocortin-4 Receptor (MC4R) in complex with S31
分子名称: CALCIUM ION, Melanocortin receptor 4, OLEIC ACID, ...
著者Gimenez, L.E, Martin, C, Yu, J, Hollanders, C, Hernandez, C, Dahir, N.S, Wu, Y, Yao, D, Han, G.W, Wu, L, Poorten, O.V, Lamouroux, A, Mannes, M, Tourwe, D, Zhao, S, Stevens, R.C, Cone, R.D, Ballet, S.
登録日2023-09-28
公開日2024-08-07
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Novel Cocrystal Structures of Peptide Antagonists Bound to the Human Melanocortin Receptor 4 Unveil Unexplored Grounds for Structure-Based Drug Design.
J.Med.Chem., 67, 2024
7Q0R
DownloadVisualize
BU of 7q0r by Molmil
Structure of the Candida albicans 80S ribosome in complex with blasticidin s
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ...
著者Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-16
公開日2022-05-25
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q34
DownloadVisualize
BU of 7q34 by Molmil
Crystal structure of the multidrug binding transcriptional regulator LmrR in complex squaraine dye
分子名称: 2,4-bis[(E)-(1-ethyl-3,3-dimethyl-indol-2-ylidene)methyl]cyclobutane-1,3-dione, Helix-turn-helix transcriptional regulator, NICKEL (II) ION
著者Liutkus, M, Mejias, S.H, Barolo, C, Cortajarena, A.L.
登録日2021-10-26
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Designing Artificial Fluorescent Proteins: Squaraine-LmrR Biophosphors for High Performance Deep-Red Biohybrid Light-Emitting Diodes
Adv Funct Mater, 32, 2022
7UVE
DownloadVisualize
BU of 7uve by Molmil
Drosophila melanogaster setdb1-tuor domain with peptide H3K9me2K14ac
分子名称: Histone-lysine N-methyltransferase eggless, peptide H3K9me2K14ac
著者Zhou, M, Dong, A, Liu, K, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2022-05-01
公開日2022-08-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Drosophila melanogaster setdb1-tuor domain with peptide H3K9me2K14ac
To Be Published
4TNM
DownloadVisualize
BU of 4tnm by Molmil
Crystal structure of Arabidopsis importin-alpha3 armadillo repeat domain
分子名称: Importin subunit alpha
著者Wirthmueller, L, Banfield, M.
登録日2014-06-04
公開日2014-10-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Probing formation of cargo/importin-alpha transport complexes in plant cells using a pathogen effector.
Plant J., 81, 2015
7UW8
DownloadVisualize
BU of 7uw8 by Molmil
Drosophila melanogaster setdb1-tuor domain
分子名称: Histone-lysine N-methyltransferase eggless
著者Zhou, M, Dong, A, Liu, K, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2022-05-03
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Drosophila melanogaster setdb1-tuor domain
To Be Published
7UPS
DownloadVisualize
BU of 7ups by Molmil
Structural study of Legionella pneumophila effector DotY (Lpg0294)
分子名称: 1,2-ETHANEDIOL, DotY (Lpg0294)
著者Chung, I.Y.W, Cygler, M.
登録日2022-04-16
公開日2022-08-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structural study of Legionella pneumophila effector DotY (Lpg0294), a component of the Dot/Icm type IV secretion system.
Acta Crystallogr.,Sect.F, 78, 2022
8XI9
DownloadVisualize
BU of 8xi9 by Molmil
Crystal structure of FRB-FKBP fusion protein in complex with rapamycin
分子名称: FRB-FKBP fusion protein, RAPAMYCIN IMMUNOSUPPRESSANT DRUG
著者Inobe, T, Sakaguchi, R, Obita, T, Mukaiyama, A, Yokoyama, T, Mizuguchi, M, Akiyama, S.
登録日2023-12-19
公開日2024-08-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural insights into rapamycin-induced oligomerization of a FRB-FKBP fusion protein.
Febs Lett., 598, 2024
7UFT
DownloadVisualize
BU of 7uft by Molmil
Cryo-EM Structure of Bl_Man38C at 2.9 A
分子名称: Alpha-mannosidase, ZINC ION
著者Santos, C.R, Cordeiro, R.L, Domingues, M.N, Borges, A.C, de Farias, M.A, Van Heel, M, Murakami, M.T, Portugal, R.V.
登録日2022-03-23
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM Structure of Bl_Man38C at 2.9 A
Nat.Chem.Biol., 2022
8WGO
DownloadVisualize
BU of 8wgo by Molmil
Cryo-EM structure of ClassIII Lanthipeptide modification enzyme PneKC in the presence of PneA and GTPrS.
分子名称: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Li, Y, Luo, M, Shao, K, Li, J.
登録日2023-09-22
公開日2024-08-28
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Mechanistic insights into lanthipeptide modification by a distinct subclass of LanKC enzyme that forms dimers.
Nat Commun, 15, 2024
1ESM
DownloadVisualize
BU of 1esm by Molmil
STRUCTURAL BASIS FOR THE FEEDBACK REGULATION OF ESCHERICHIA COLI PANTOTHENATE KINASE BY COENZYME A
分子名称: COENZYME A, PANTOTHENATE KINASE
著者Yun, M, Park, C.G, Kim, J.Y, Rock, C.O, Jackowski, S, Park, H.W.
登録日2000-04-10
公開日2000-09-20
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for the feedback regulation of Escherichia coli pantothenate kinase by coenzyme A.
J.Biol.Chem., 275, 2000
7UPV
DownloadVisualize
BU of 7upv by Molmil
Structure of maize BZR1-type beta-amylase provides new insights into its noncatalytic adaptation
分子名称: Beta-amylase, GLYCEROL
著者Palayam, M, Sun, F, Shabek, N.
登録日2022-04-18
公開日2022-08-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structure of maize BZR1-type beta-amylase BAM8 provides new insights into its noncatalytic adaptation.
J.Struct.Biol., 214, 2022
7UPZ
DownloadVisualize
BU of 7upz by Molmil
Structural basis for cell type specific DNA binding of C/EBPbeta: the case of cell cycle inhibitor p15INK4b promoter
分子名称: CCAAT/enhancer-binding protein beta, DNA (5'-D(*AP*TP*TP*CP*TP*TP*AP*AP*GP*AP*AP*AP*GP*AP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*TP*CP*TP*TP*TP*CP*TP*TP*AP*AP*GP*AP*A)-3')
著者Lountos, G.T, Cherry, S, Tropea, J.E, Wlodawer, A, Miller, M.
登録日2022-04-18
公開日2022-11-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.487 Å)
主引用文献Structural basis for cell type specific DNA binding of C/EBP beta : The case of cell cycle inhibitor p15INK4b promoter.
J.Struct.Biol., 214, 2022
1EUG
DownloadVisualize
BU of 1eug by Molmil
CRYSTAL STRUCTURE OF ESCHERICHIA COLI URACIL DNA GLYCOSYLASE AND ITS COMPLEXES WITH URACIL AND GLYCEROL: STRUCTURE AND GLYCOSYLASE MECHANISM REVISITED
分子名称: PROTEIN (GLYCOSYLASE)
著者Xiao, G, Tordova, M, Jagadeesh, J, Drohat, A.C, Stivers, J.T, Gilliland, G.L.
登録日1998-10-12
公開日1999-10-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of Escherichia coli uracil DNA glycosylase and its complexes with uracil and glycerol: structure and glycosylase mechanism revisited.
Proteins, 35, 1999
1EFO
DownloadVisualize
BU of 1efo by Molmil
CRYSTAL STRUCTURE OF AN ADENINE BULGE IN THE RNA CHAIN OF A DNA/RNA HYBRID, D(CTCCTCTTC)/R(GAAGAGAGAG)
分子名称: DNA (5'-D(*CP*TP*CP*CP*TP*CP*TP*TP*C)-3'), RNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*GP*AP*G)-3')
著者Sudarsanakumar, C, Xiong, Y, Sundaralingam, M.
登録日2000-02-09
公開日2000-05-29
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of an adenine bulge in the RNA chain of a DNA.RNA hybrid, d(CTCCTCTTC).r(gaagagagag).
J.Mol.Biol., 299, 2000
6JIB
DownloadVisualize
BU of 6jib by Molmil
Human MTHFD2 in complex with DS44960156
分子名称: 4-(5-oxo-1,5-dihydro-2H-[1]benzopyrano[3,4-c]pyridine-3(4H)-carbonyl)benzoic acid, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, ...
著者Suzuki, M, Matsui, Y, Kawai, J.
登録日2019-02-20
公開日2019-06-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-Based Design and Synthesis of an Isozyme-Selective MTHFD2 Inhibitor with a Tricyclic Coumarin Scaffold.
Acs Med.Chem.Lett., 10, 2019
1EVP
DownloadVisualize
BU of 1evp by Molmil
CRYSTAL STRUCTURE OF THE CHIMERICAL DECAMER D(CCACTAGTG)R(G)
分子名称: DNA/RNA (5'-D(*CP*CP*AP*CP*TP*AP*GP*TP*GP)-R(*G)-3')
著者Wahl, M.C, Sundaralingam, M.
登録日2000-04-20
公開日2000-05-01
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献B-form to A-form conversion by a 3'-terminal ribose: crystal structure of the chimera d(CCACTAGTG)r(G).
Nucleic Acids Res., 28, 2000
6JNF
DownloadVisualize
BU of 6jnf by Molmil
Cryo-EM structure of the translocator of the outer mitochondrial membrane
分子名称: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl tetradecanoate, Mitochondrial import receptor subunit TOM22, Mitochondrial import receptor subunit TOM40, ...
著者Araiso, Y, Tsutsumi, A, Suzuki, J, Yunoki, K, Kawano, S, Kikkawa, M, Endo, T.
登録日2019-03-14
公開日2019-10-16
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.81 Å)
主引用文献Structure of the mitochondrial import gate reveals distinct preprotein paths.
Nature, 575, 2019
1EIY
DownloadVisualize
BU of 1eiy by Molmil
THE CRYSTAL STRUCTURE OF PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH COGNATE TRNAPHE
分子名称: PHENYLALANYL-TRNA SYNTHETASE, TRNA(PHE)
著者Goldgur, Y, Mosyak, L, Reshetnikova, L, Ankilova, V, Safro, M.
登録日2000-02-29
公開日2000-03-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献The crystal structure of phenylalanyl-tRNA synthetase from thermus thermophilus complexed with cognate tRNAPhe.
Structure, 5, 1997
1E5U
DownloadVisualize
BU of 1e5u by Molmil
NMR Representative Structure of Intimin-190 (Int190) from Enteropathogenic E. coli
分子名称: INTIMIN
著者Prasannan, S, Matthews, S.J, Batchelor, M, Daniell, S, Reece, S, Frankel, G, Dougan, G, Connerton, I, Bloomberg, G.
登録日2000-08-02
公開日2000-08-16
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Structural Basis for Recognition of the Translocated Intimin Receptor (Tir) by Intimin from Enteropathogenic E. Coli
Embo J., 19, 2000
6JQF
DownloadVisualize
BU of 6jqf by Molmil
Crystallization analysis of a beta-N-acetylhexosaminidase (Am2136) from Akkermansia muciniphila
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glycoside hydrolase, ...
著者Zhang, M, Chen, X.
登録日2019-03-31
公開日2019-12-11
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Biochemical characteristics and crystallographic evidence for substrate-assisted catalysis of a beta-N-acetylhexosaminidase in Akkermansia muciniphila.
Biochem.Biophys.Res.Commun., 517, 2019

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon