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PDB: 51630 件

8XSX
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Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA, SERBP1 and eEF2
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Li, X, Wang, M, Cheng, J.
登録日2024-01-10
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
8YTE
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Crystal Structure of TrkA D5 domain in complex with macrocyclic peptide
分子名称: 1,2-ETHANEDIOL, AMINOMETHYLAMIDE, High affinity nerve growth factor receptor, ...
著者Yamada, T, Mihara, K, Ueda, T, Yamauchi, D, Shimizu, M, Ando, A, Mayumi, K, Nakata, Z, Mikamiyama, H.
登録日2024-03-25
公開日2024-07-10
最終更新日2024-07-24
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Discovery and Hit to Lead Optimization of Macrocyclic Peptides as Novel Tropomyosin Receptor Kinase A Antagonists.
J.Med.Chem., 67, 2024
8XT2
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Cryo-EM structure of the human 55S mitoribosome with 10uM Tigecycline
分子名称: 12s rRNA, 16s rRNA, 39S ribosomal protein L22, ...
著者Li, X, Wang, M, Cheng, J.
登録日2024-01-10
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
8YOO
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Cryo-EM structure of the human 80S ribosome with 100 um Tigecycline
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Li, X, Wang, M, Denk, T, Cheng, J.
登録日2024-03-13
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (2 Å)
主引用文献Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
8Y46
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Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to L-KDF or L-2,4-DKDF
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, L-2,4-diketo-3-deoxyfuconate, ...
著者Akagashi, M, Watanabe, S.
登録日2024-01-30
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8XSZ
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Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNA
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Li, X, Wang, M, Cheng, J.
登録日2024-01-10
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
8Y4B
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Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to L-2,4-DKDF and NADH
分子名称: L-2,4-diketo-3-deoxyfuconate, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SDR family oxidoreductase
著者Akagashi, M, Watanabe, S.
登録日2024-01-30
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8XT0
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Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline
分子名称: 12s rRNA, 16s rRNA, 39S ribosomal protein L22, ...
著者Li, X, Wang, M, Cheng, J.
登録日2024-01-10
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
8YFZ
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CRYSTAL STRUCTURE OF THE EST1 H274E MUTANT AT PH 4.2
分子名称: Carboxylesterase, octyl beta-D-glucopyranoside
著者Unno, H, Oshima, Y, Nishino, T, Nakayama, T, Kusunoki, M.
登録日2024-02-26
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Lowering pH optimum of activity of SshEstI, a slightly alkaliphilic archaeal esterase of the hormone-sensitive lipase family.
J.Biosci.Bioeng., 2024
8Y11
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Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to NAD(H) and sulfate ion
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Akagashi, M, Watanabe, S.
登録日2024-01-23
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
6ZMK
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Crystal structure of human GFAT-1 L405R
分子名称: GLUCOSE-6-PHOSPHATE, GLUTAMIC ACID, Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
著者Ruegenberg, S, Mayr, F, Miethe, S, Atanassov, I, Baumann, U, Denzel, M.S.
登録日2020-07-02
公開日2020-08-05
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.382 Å)
主引用文献Protein kinase A controls the hexosamine pathway by tuning the feedback inhibition of GFAT-1.
Nat Commun, 12, 2021
8YFY
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CRYSTAL STRUCTURE OF THE EST1 H274D MUTANT AT PH 4.2
分子名称: Carboxylesterase, octyl beta-D-glucopyranoside
著者Unno, H, Oshima, Y, Nishino, T, Nakayama, T, Kusunoki, M.
登録日2024-02-26
公開日2024-07-10
最終更新日2024-08-28
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Lowering pH optimum of activity of SshEstI, a slightly alkaliphilic archaeal esterase of the hormone-sensitive lipase family.
J.Biosci.Bioeng., 138, 2024
8XWK
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Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase from Herbaspillum huttiense (apo form)
分子名称: DI(HYDROXYETHYL)ETHER, SDR family oxidoreductase
著者Akagashi, M, Watanabe, S.
登録日2024-01-16
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8YK2
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Blood group B alpha-1,3-galactosidase AgaBb from Bifidobacterium bifidum, construct T7-tag_24-700
分子名称: Alpha-galactosidase, GLYCEROL, SODIUM ION, ...
著者Kashima, T, Akama, M, Ashida, H, Fushinobu, S.
登録日2024-03-04
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Crystal Structure of Bifidobacterium bifidum Glycoside Hydrolase Family 110 alpha-Galactosidase Specific for Blood Group B Antigen
J.Appl.Glyosci., 2024
8YOP
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BU of 8yop by Molmil
Cryo-EM structure of the human 80S ribosome with 4 um Tigecycline
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Li, X, Wang, M, Denk, T, Cheng, J.
登録日2024-03-13
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Structural basis for differential inhibition of eukaryotic ribosomes by tigecycline.
Nat Commun, 15, 2024
8Y4J
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BU of 8y4j by Molmil
Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase bound to D-KDP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, D-2-keto-3-deoxypentonate, DI(HYDROXYETHYL)ETHER, ...
著者Akagashi, M, Watanabe, S.
登録日2024-01-30
公開日2024-07-10
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Crystal structure of L-2-keto-3-deoxyfuconate 4-dehydrogenase reveals a unique binding mode as a alpha-furanosyl hemiketal of substrates.
Sci Rep, 14, 2024
8YBK
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Cryo-EM structure of the human nucleosome containing the H3.1 E97K mutant
分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kimura, T, Hirai, S, Kujirai, T, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2024-02-14
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.69 Å)
主引用文献Cryo-EM structure and biochemical analyses of the nucleosome containing the cancer-associated histone H3 mutation E97K.
Genes Cells, 2024
8YBJ
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Cryo-EM structure of human nucleosome core particle composed of the Widom 601 DNA sequence
分子名称: DNA (145-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ...
著者Kimura, T, Hirai, S, Kujirai, T, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
登録日2024-02-14
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献Cryo-EM structure and biochemical analyses of the nucleosome containing the cancer-associated histone H3 mutation E97K.
Genes Cells, 2024
8UK5
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Crystal structure of the bromodomain of human ATAD2B in complex with histone H4S1(ph)K5ac
分子名称: ATPase family AAA domain-containing protein 2B, Histone H4S1(ph)K5ac
著者Montgomery, C, Phillips, M, Nix, J.C, Glass, K.C.
登録日2023-10-12
公開日2024-06-05
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Impact of Combinatorial Histone Modifications on Acetyllysine Recognition by the ATAD2 and ATAD2B Bromodomains.
J.Med.Chem., 67, 2024
8UHL
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ATAD2B bromodomain in complex with histone H4 acetylated at lysine 12
分子名称: ATPase family AAA domain-containing protein 2B, Histone H4
著者Phillips, M, Montgomery, C, Nix, J.C, Glass, K.C.
登録日2023-10-09
公開日2024-06-05
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Impact of Combinatorial Histone Modifications on Acetyllysine Recognition by the ATAD2 and ATAD2B Bromodomains.
J.Med.Chem., 67, 2024
8UY1
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Methylenetetrahydrofolate reductase from Chaetomium thermophilum DSM 1495, Active (R) State
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate reductase-like protein
著者Yamada, K, Mendoza, J, Koutmos, M.
登録日2023-11-12
公開日2024-06-19
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (3.49 Å)
主引用文献Structural basis of S-adenosylmethionine-dependent allosteric transition from active to inactive states in methylenetetrahydrofolate reductase.
Nat Commun, 15, 2024
8U2Y
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Solution structure of the PHD6 finger of MLL4 bound to TET3
分子名称: Histone-lysine N-methyltransferase 2D, Methylcytosine dioxygenase TET3, ZINC ION
著者Mohid, S.A, Zandian, M, Zhang, Y, Kutateladze, T.G.
登録日2023-09-06
公開日2024-06-19
実験手法SOLUTION NMR
主引用文献MLL4 binds TET3.
Structure, 32, 2024
5ZQH
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Crystal structure of Streptococcus transcriptional regulator
分子名称: PadR family transcriptional regulator
著者Kim, M, Hong, M.
登録日2018-04-19
公開日2019-05-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-based functional analysis of a PadR transcription factor from Streptococcus pneumoniae and characteristic features in the PadR subfamily-2.
Biochem.Biophys.Res.Commun., 532, 2020
6ZYE
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YnaI in an open-like conformation
分子名称: YnaI,Low conductance mechanosensitive channel YnaI
著者Flegler, V.J, Rasmussen, A, Rao, S, Wu, N, Zenobi, R, Sansom, M.S.P, Hedrich, R, Rasmussen, T, Boettcher, B.
登録日2020-07-31
公開日2020-11-25
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献The MscS-like channel YnaI has a gating mechanism based on flexible pore helices.
Proc.Natl.Acad.Sci.USA, 117, 2020
8UF6
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Structure of Trek-1(K2P2.1) with ML336
分子名称: CADMIUM ION, DECANE, DODECANE, ...
著者Lolicato, M, Mondal, A, Minor, D.L.
登録日2023-10-03
公開日2024-06-26
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of Trek-1(K2P2.1) with ML336
To Be Published

224201

件を2024-08-28に公開中

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