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PDB: 51586 件

4YUP
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Multiconformer fixed-target X-ray free electron (XFEL) model of CypA at 273 K
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
登録日2015-03-18
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
3L30
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Crystal structure of porcine pancreatic phospholipase A2 complexed with dihydroxyberberine
分子名称: 4,14-dihydro-8H-[1,3]dioxolo[4,5-g]isoquino[3,2-a]isoquinoline-9,10-diol, CALCIUM ION, CHLORIDE ION, ...
著者Naveen, C, Prasanth, G.K, Abhilash, J, Pradeep, M, Ponnuraj, K, Sadasivan, C, Haridas, M.
登録日2009-12-16
公開日2010-01-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of porcine pancreatic phospholipase A2 complexed with dihydroxyberberine
To be Published
4OMX
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Crystal structure of goat beta-lactoglobulin (trigonal form)
分子名称: FORMAMIDE, SULFATE ION, UREA, ...
著者Loch, J.I, Swiatek, S, Czub, M, Ludwikowska, M, Lewinski, K.
登録日2014-01-27
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Conformational variability of goat beta-lactoglobulin: Crystallographic and thermodynamic studies.
Int.J.Biol.Macromol., 72C, 2014
4V82
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Crystal structure of cyanobacterial Photosystem II in complex with terbutryn
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Gabdulkhakov, A, Broser, M, Guskov, A, Kern, J, Glockner, C, Muh, F, Saenger, W, Zouni, A.
登録日2010-11-30
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of cyanobacterial photosystem II Inhibition by the herbicide terbutryn
J.Biol.Chem., 286, 2011
6QUQ
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Crystal structure of glutathionylated glycolytic glyceraldehyde-3- phosphate dehydrogenase from Arabidopsis thaliana (AtGAPC1)
分子名称: GLUTATHIONE, Glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic, ...
著者Fermani, S, Zaffagnini, M, Falini, G, Trost, P.
登録日2019-02-28
公開日2019-12-04
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.993 Å)
主引用文献Glutathionylation primes soluble glyceraldehyde-3-phosphate dehydrogenase for late collapse into insoluble aggregates.
Proc.Natl.Acad.Sci.USA, 116, 2019
3UU4
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BU of 3uu4 by Molmil
The GLIC pentameric Ligand-Gated Ion Channel Loop2-21' mutant reduced in the crystal in a locally-closed conformation (LC1 subtype)
分子名称: DODECYL-BETA-D-MALTOSIDE, Glr4197 protein
著者Sauguet, L, Nury, H, Corringer, P.J, Delarue, M.
登録日2011-11-28
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献A locally closed conformation of a bacterial pentameric proton-gated ion channel.
Nat.Struct.Mol.Biol., 19, 2012
4YUG
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BU of 4yug by Molmil
Multiconformer synchrotron model of CypA at 100 K
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
登録日2015-03-18
公開日2015-10-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
4YUL
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BU of 4yul by Molmil
Multiconformer synchrotron model of CypA at 280 K
分子名称: Peptidyl-prolyl cis-trans isomerase A
著者Keedy, D.A, Kenner, L.R, Warkentin, M, Woldeyes, R.A, Thompson, M.C, Brewster, A.S, Van Benschoten, A.H, Baxter, E.L, Hopkins, J.B, Uervirojnangkoorn, M, McPhillips, S.E, Song, J, Mori, R.A, Holton, J.M, Weis, W.I, Brunger, A.T, Soltis, M, Lemke, H, Gonzalez, A, Sauter, N.K, Cohen, A.E, van den Bedem, H, Thorne, R.E, Fraser, J.S.
登録日2015-03-18
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Mapping the conformational landscape of a dynamic enzyme by multitemperature and XFEL crystallography.
Elife, 4, 2015
3LRX
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BU of 3lrx by Molmil
Crystal Structure of the C-terminal domain (residues 78-226) of PF1911 hydrogenase from Pyrococcus furiosus, Northeast Structural Genomics Consortium Target PfR246A
分子名称: Putative hydrogenase
著者Forouhar, F, Abashidze, M, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Foote, E.L, Belote, R.L, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2010-02-11
公開日2010-03-16
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Northeast Structural Genomics Consortium Target PfR246A
To be Published
1MN9
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BU of 1mn9 by Molmil
NDP kinase mutant (H122G) complex with RTP
分子名称: MAGNESIUM ION, NDP kinase, RIBAVIRIN TRIPHOSPHATE
著者Gallois-montbrun, S, Chen, Y, Dutartre, H, Morera, S, Guerreiro, C, Mulard, L, Schneider, B, Janin, J, Canard, B, Veron, M, Deville-bonne, D.
登録日2002-09-05
公開日2003-03-18
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Analysis of the Activation of Ribavirin Analogs by NDP Kinase: Comparison with Other Ribavirin Targets
MOL.PHARMACOL., 63, 2003
6KHX
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BU of 6khx by Molmil
Crystal structure of Prx from Akkermansia muciniphila
分子名称: CALCIUM ION, Peroxiredoxin
著者Li, M, Wang, J, Xu, W, Wang, Y, Zhang, M, Wang, M.
登録日2019-07-16
公開日2020-02-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Crystal structure of Akkermansia muciniphila peroxiredoxin reveals a novel regulatory mechanism of typical 2-Cys Prxs by a distinct loop.
Febs Lett., 594, 2020
4OMW
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BU of 4omw by Molmil
Crystal structure of goat beta-lactoglobulin (orthorhombic form)
分子名称: Beta-lactoglobulin, GLYCEROL, SULFATE ION, ...
著者Loch, J.I, Swiatek, S, Czub, M, Ludwikowska, M, Lewinski, K.
登録日2014-01-27
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Conformational variability of goat beta-lactoglobulin: Crystallographic and thermodynamic studies.
Int.J.Biol.Macromol., 72C, 2014
4OQ2
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BU of 4oq2 by Molmil
5hmC specific restriction endonuclease PvuRTs1I
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Restriction endonuclease PvuRts1 I
著者Kazrani, A.A, Kowalska, M, Czapinska, H, Bochtler, M.
登録日2014-02-07
公開日2014-03-12
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structure of the 5hmC specific endonuclease PvuRts1I.
Nucleic Acids Res., 42, 2014
3LVZ
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BU of 3lvz by Molmil
New refinement of the crystal structure of BJP-1, a subclass B3 metallo-beta-lactamase of Bradyrhizobium japonicum
分子名称: Blr6230 protein, ZINC ION
著者Docquier, J.D, Benvenuti, M, Calderone, V, Stoczko, M, Rossolini, G.M, Mangani, S.
登録日2010-02-23
公開日2011-01-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献High-resolution crystal structure of the subclass B3 metallo-beta-lactamase BJP-1: rational basis for substrate specificity and interaction with sulfonamides.
Antimicrob.Agents Chemother., 54, 2010
3UFA
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BU of 3ufa by Molmil
Crystal structure of the staphylococcal serine protease SplA in complex with a specific phosphonate inhibitor
分子名称: CHLORIDE ION, N-(3-carboxypropanoyl)-L-valyl-N-[(1S)-2-phenyl-1-phosphonoethyl]-L-prolinamide, Serine protease splA
著者Zdzalik, M, Pietrusewicz, E, Pustelny, K, Stec-Niemczyk, J, Popowicz, G.M, Potempa, J, Oleksyszyn, J, Dubin, G.
登録日2011-10-31
公開日2013-01-23
最終更新日2014-03-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Development and binding characteristics of phosphonate inhibitors of SplA protease from Staphylococcus aureus.
Protein Sci., 23, 2014
1MOO
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BU of 1moo by Molmil
Site Specific Mutant (H64A) of Human Carbonic Anhydrase II at high resolution
分子名称: 4-METHYLIMIDAZOLE, Carbonic Anhydrase II, MERCURY (II) ION, ...
著者Duda, D.M, Govindasamy, L, Agbandje-McKenna, M, Tu, C.K, Silverman, D.N, McKenna, R.
登録日2002-09-09
公開日2002-09-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献The refined atomic structure of carbonic anhydrase II at 1.05 A resolution: implications of chemical rescue of proton transfer.
Acta Crystallogr.,Sect.D, 59, 2003
7NPN
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BU of 7npn by Molmil
B-brick bare in 5 mM Mg2+
分子名称: SCAFFOLD STRAND, STAPLE STRAND
著者Bertosin, E, Stoemmer, P, Feigl, E, Wenig, M, Honemann, M, Dietz, H.
登録日2021-02-27
公開日2021-03-31
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (10.38 Å)
主引用文献Cryo-Electron Microscopy and Mass Analysis of Oligolysine-Coated DNA Nanostructures.
Acs Nano, 15, 2021
3LN9
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BU of 3ln9 by Molmil
Crystal structure of the fibril-specific B10 antibody fragment
分子名称: CITRATE ANION, GLYCEROL, Immunoglobulin heavy chain antibody variable domain B10, ...
著者Parthier, C, Morgado, I, Stubbs, M.T, Faendrich, M.
登録日2010-02-02
公開日2010-12-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Amyloid Fibril Recognition with the Conformational B10 Antibody Fragment Depends on Electrostatic Interactions.
J.Mol.Biol., 2010
4Z8X
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Truncated FtsH from A. aeolicus
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH, SULFATE ION, ...
著者Vostrukhina, M, Baumann, U, Schacherl, M, Bieniossek, C, Lanz, M, Baumgartner, R.
登録日2015-04-09
公開日2015-05-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献The structure of Aquifex aeolicus FtsH in the ADP-bound state reveals a C2-symmetric hexamer.
Acta Crystallogr.,Sect.D, 71, 2015
4OE9
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The crystal structure of the n-terminal domain of COMMD9
分子名称: CITRIC ACID, COMM domain-containing protein 9, POTASSIUM ION
著者Hospenthal, M, Celligoi, D, Lott, J.S.
登録日2014-01-12
公開日2015-03-04
最終更新日2018-08-22
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural insights into the architecture and membrane interactions of the conserved COMMD proteins.
Elife, 7, 2018
4OEK
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Crystal Structure of the Complex of goat Lactoperoxidase with Phenylethylamine at 2.47 A Resolution
分子名称: 1,2-ETHANEDIOL, 2-PHENYLETHYLAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kumar, M, Singh, R.P, Sinha, M, Bhushan, A, Kaur, P, Sharma, S, Singh, T.P.
登録日2014-01-13
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Crystal Structure of the Complex of goat Lactoperoxidase with Phenylethylamine at 2.47 A
To be Published
6KRO
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Tankyrase-2 in complex with RK-582
分子名称: 6-[(2S,6R)-2,6-dimethylmorpholin-4-yl]-4-fluoranyl-1-methyl-1'-(8-methyl-4-oxidanylidene-3,5,6,7-tetrahydropyrido[2,3-d]pyrimidin-2-yl)spiro[indole-3,4'-piperidine]-2-one, GLYCEROL, PHOSPHATE ION, ...
著者Niwa, H, Shirai, F, Sato, S, Tsumura, T, Okue, M, Shirouzu, M, Seimiya, H, Umehara, T.
登録日2019-08-22
公開日2020-04-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Design and Discovery of an Orally Efficacious Spiroindolinone-Based Tankyrase Inhibitor for the Treatment of Colon Cancer.
J.Med.Chem., 63, 2020
3LKD
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BU of 3lkd by Molmil
Crystal Structure of the type I restriction-modification system methyltransferase subunit from Streptococcus thermophilus, Northeast Structural Genomics Consortium Target SuR80
分子名称: Type I restriction-modification system methyltransferase subunit
著者Vorobiev, S, Su, M, Seetharaman, J, Mao, M, Xiao, R, Foote, E.L, Ciccosanti, C, Wang, D, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2010-01-27
公開日2010-02-09
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Northeast Structural Genomics Consortium Target SuR80
To be published
3LOS
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BU of 3los by Molmil
Atomic Model of Mm-cpn in the Closed State
分子名称: Chaperonin
著者Zhang, J, Baker, M.L, Schroeder, G, Douglas, N.R, Reissmann, S, Jakana, J, Dougherty, M, Fu, C.J, Levitt, M, Ludtke, S.J, Frydman, J, Chiu, W.
登録日2010-02-04
公開日2010-03-16
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Mechanism of folding chamber closure in a group II chaperonin
Nature, 463, 2010
6KU3
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Crystal structure of gibberellin 2-oxidase3 (GA2ox3)in rice
分子名称: 2-OXOGLUTARIC ACID, GIBBERELLIN A4, GLYCEROL, ...
著者Takehara, S, Mikami, B, Sakuraba, S, Matsuoka, M, Ueguchi-Tanaka, M.
登録日2019-08-30
公開日2020-05-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A common allosteric mechanism regulates homeostatic inactivation of auxin and gibberellin.
Nat Commun, 11, 2020

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