Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 52161 件

6U1M
DownloadVisualize
BU of 6u1m by Molmil
Resting state of rat cysteine dioxygenase R60E variant
分子名称: Cysteine dioxygenase type 1, FE (III) ION
著者Pinkney, H.R, Fellner, M, Wilbanks, S.M.
登録日2019-08-16
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Resting state of rat cysteine dioxygenase R60E variant
To be Published
6U5H
DownloadVisualize
BU of 6u5h by Molmil
CryoEM Structure of Pyocin R2 - precontracted - hub
分子名称: Probable bacteriophage protein Pyocin R2
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
3ZVE
DownloadVisualize
BU of 3zve by Molmil
3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 84
分子名称: 3C PROTEASE, O-tert-butyl-N-[(9H-fluoren-9-ylmethoxy)carbonyl]-L-threonyl-N-{(2R)-5-ethoxy-5-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]pentan-2-yl}-L-phenylalaninamide
著者Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
登録日2011-07-24
公開日2012-08-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
3ZWX
DownloadVisualize
BU of 3zwx by Molmil
Crystal structure of ADP-ribosyl cyclase complexed with 8-bromo-ADP- ribose
分子名称: ADP-RIBOSYL CYCLASE, CHLORIDE ION, [(2R,3S,4R,5R)-5-(6-amino-8-bromo-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3S,4S)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate
著者Kotaka, M, Graeff, R, Zhang, L.H, Lee, H.C, Hao, Q.
登録日2011-08-03
公開日2012-08-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Studies of Intermediates Along the Cyclization Pathway of Aplysia Adp-Ribosyl Cyclase.
To be Published
3ZY5
DownloadVisualize
BU of 3zy5 by Molmil
Crystal structure of POFUT1 in complex with GDP-fucose (crystal-form-I)
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GUANOSINE-5'-DIPHOSPHATE-BETA-L-FUCOPYRANOSE, PUTATIVE GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1, ...
著者Lira-Navarrete, E, Valero-Gonzalez, J, Villanueva, R, Martinez-Julvez, M, Tejero, T, Merino, P, Panjikar, S, Hurtado-Guerrero, R.
登録日2011-08-17
公開日2011-09-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural Insights Into the Mechanism of Protein O-Fucosylation.
Plos One, 6, 2011
3ZVB
DownloadVisualize
BU of 3zvb by Molmil
3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 81
分子名称: 3C PROTEASE, ETHYL (4R)-4-{[N-(TERT-BUTOXYCARBONYL)-L-PHENYLALANYL]AMINO}-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE
著者Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
登録日2011-07-24
公開日2012-08-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
3ZEZ
DownloadVisualize
BU of 3zez by Molmil
Phage dUTPases control transfer of virulence genes by a proto- oncogenic G protein-like mechanism.(Staphylococcus bacteriophage 80alpha dUTPase with dUPNHPP).
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DUTPASE, MAGNESIUM ION, ...
著者Tormo-Mas, M.A, Donderis, J, Garcia-Caballer, M, Alt, A, Mir-Sanchis, I, Marina, A, Penades, J.R.
登録日2012-12-10
公開日2013-01-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism.
Mol.Cell, 49, 2013
7QBJ
DownloadVisualize
BU of 7qbj by Molmil
bacterial IMPDH chimera
分子名称: Inosine-5'-monophosphate dehydrogenase
著者Labesse, G, Gelin, M, Munier-Lehmann, H, Gedeon, A, Haouz, A.
登録日2021-11-19
公開日2023-05-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Insight into the role of the Bateman domain at the molecular and physiological levels through engineered IMP dehydrogenases.
Protein Sci., 32, 2023
3ZHT
DownloadVisualize
BU of 3zht by Molmil
Crystal structure of the SucA domain of Mycobacterium smegmatis KGD, first post-decarboxylation intermediate from 2-oxoadipate
分子名称: (5S)-5-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-5-(2-{[(phosphonatooxy)phosphinato]oxy}ethyl)-1,3-thiazol-3-ium-2-yl}-5-hydroxypentanoate, CALCIUM ION, MAGNESIUM ION, ...
著者Wagner, T, Barilone, N, Bellinzoni, M, Alzari, P.M.
登録日2012-12-24
公開日2013-11-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A Dual Conformation of the Post-Decarboxylation Intermediate is Associated with Distinct Enzyme States in Mycobacterial Alpha-Ketoglutarate Decarboxylase (Kgd).
Biochem.J., 457, 2014
3ZWW
DownloadVisualize
BU of 3zww by Molmil
Crystal structure of ADP-ribosyl cyclase complexed with ara-2'F-ADP- ribose at 2.3 angstrom
分子名称: ADP-RIBOSYL CYCLASE, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl [(2R,3R,4R)-4-fluoro-3-hydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate
著者Kotaka, M, Graeff, R, Zhang, L.H, Lee, H.C, Hao, Q.
登録日2011-08-03
公開日2011-11-30
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Studies of Intermediates Along the Cyclization Pathway of Aplysia Adp-Ribosyl Cyclase.
J.Mol.Biol., 415, 2012
3ZYC
DownloadVisualize
BU of 3zyc by Molmil
DYNAMIN 1 GTPASE GED FUSION DIMER COMPLEXED WITH GMPPCP
分子名称: DYNAMIN-1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER
著者Chappie, J.S, Mears, J.A, Fang, S, Leonard, M, Schmid, S.L, Milligan, R.A, Hinshaw, J.E, Dyda, F.
登録日2011-08-22
公開日2011-10-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Pseudoatomic Model of the Dynamin Polymer Identifies a Hydrolysis-Dependent Powerstroke.
Cell(Cambridge,Mass.), 147, 2011
3ZYW
DownloadVisualize
BU of 3zyw by Molmil
Crystal structure of the first glutaredoxin domain of human glutaredoxin 3 (GLRX3)
分子名称: 1,2-ETHANEDIOL, GLUTAREDOXIN-3
著者Vollmar, M, Johansson, C, Cocking, R, Krojer, T, Muniz, J.R.C, Kavanagh, K.L, von Delft, F, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, Oppermann, U.
登録日2011-08-29
公開日2012-02-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystal Structure of the First Glutaredoxin Domain of Human Glutaredoxin 3 (Glrx3)
To be Published
7QA5
DownloadVisualize
BU of 7qa5 by Molmil
Solution structure of the C terminal domain of MgtC (PA4635) from Pseudomonas aeruginosa
分子名称: Protein MgtC
著者Barthe, P, Cohen-Gonsaud, M.
登録日2021-11-16
公開日2022-05-04
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Solution structure of the C terminal domain of MgtC (PA4635) from Pseudomonas aeruginosa
To Be Published
6TY4
DownloadVisualize
BU of 6ty4 by Molmil
FAK structure with AMP-PNP from single particle analysis of 2D crystals
分子名称: Focal adhesion kinase 1, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Acebron, I, Righetto, R, Biyani, N, Chami, M, Boskovic, J, Stahlberg, H, Lietha, D.
登録日2020-01-15
公開日2020-08-19
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (5.96 Å)
主引用文献Structural basis of Focal Adhesion Kinase activation on lipid membranes.
Embo J., 39, 2020
7QDX
DownloadVisualize
BU of 7qdx by Molmil
bacterial IMPDH chimera
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, MAGNESIUM ION
著者Labesse, G, Gelin, M, Munier-Lehmann, H, Gedeon, A, Haouz, A.
登録日2021-11-30
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Insight into the role of the Bateman domain at the molecular and physiological levels through engineered IMP dehydrogenases.
Protein Sci., 32, 2023
7QEM
DownloadVisualize
BU of 7qem by Molmil
bacterial IMPDH chimera
分子名称: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase
著者Labesse, G, Gelin, M, Gedeon, A, Haouz, A, Munier-Lehmann, H.
登録日2021-12-03
公開日2023-06-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Insight into the role of the Bateman domain at the molecular and physiological levels through engineered IMP dehydrogenases.
Protein Sci., 32, 2023
3ZJG
DownloadVisualize
BU of 3zjg by Molmil
A20 OTU domain with irreversibly oxidised Cys103 from 60 min H2O2 soak.
分子名称: CHLORIDE ION, TUMOR NECROSIS FACTOR ALPHA-INDUCED PROTEIN 3
著者Kulathu, Y, Garcia, F.J, Mevissen, T.E.T, Busch, M, Arnaudo, N, Carroll, K.S, Barford, D, Komander, D.
登録日2013-01-17
公開日2013-03-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Regulation of A20 and Other Otu Deubiquitinases by Reversible Oxidation
Nat.Commun., 4, 2013
3ZZG
DownloadVisualize
BU of 3zzg by Molmil
Crystal structure of the amino acid kinase domain from Saccharomyces cerevisiae acetylglutamate kinase without ligands
分子名称: ACETYLGLUTAMATE KINASE
著者de Cima, S, Gil-Ortiz, F, Crabeel, M, Fita, I, Rubio, V.
登録日2011-09-01
公開日2012-05-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
Plos One, 7, 2012
7R6H
DownloadVisualize
BU of 7r6h by Molmil
RHCC in complex with o-carborane
分子名称: Tetrabrachion, ortho-carborane
著者Heide, F, McDougall, M, Stetefeld, J.
登録日2021-06-22
公開日2021-07-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Boron rich nanotube drug carrier system is suited for boron neutron capture therapy.
Sci Rep, 11, 2021
3ZI3
DownloadVisualize
BU of 3zi3 by Molmil
Crystal structure of the B24His-insulin - human analogue
分子名称: INSULIN, SULFATE ION
著者Zakova, L, Kletvikova, E, Veverka, V, Lepsik, M, Watson, C.J, Turkenburg, J.P, Jiracek, J, Brzozowski, A.M.
登録日2013-01-02
公開日2013-03-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Integrity of the B24 Site in Human Insulin is Important for Hormone Functionality
J.Biol.Chem., 288, 2013
3ZK7
DownloadVisualize
BU of 3zk7 by Molmil
CRYSTAL STRUCTURE OF PNEUMOCOCCAL SURFACE ANTIGEN PSAA IN THE METAL-FREE, OPEN STATE
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE ABC TRANSPORTER SUBSTRATE-BINDING LIPOPROTEIN
著者Counago, R.M, Ween, M.P, Bajaj, M, Zuegg, J, Cooper, M.A, McEwan, A.G, Paton, J.C, Kobe, B, McDevitt, C.A.
登録日2013-01-22
公開日2013-11-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Imperfect coordination chemistry facilitates metal ion release in the Psa permease.
Nat. Chem. Biol., 10, 2014
6U5O
DownloadVisualize
BU of 6u5o by Molmil
Structure of the Human Metapneumovirus Polymerase bound to the phosphoprotein tetramer
分子名称: Phosphoprotein, RNA-directed RNA polymerase L
著者Pan, J, Qian, X, Lattmann, S, Sahili, A.E, Yeo, T.H, Kalocsay, M, Fearns, R, Lescar, J.
登録日2019-08-28
公開日2019-09-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structure of the human metapneumovirus polymerase phosphoprotein complex.
Nature, 577, 2020
6U3T
DownloadVisualize
BU of 6u3t by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
分子名称: Alpha-hemolysin, SULFATE ION, fos-choline-14
著者Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
登録日2019-08-22
公開日2020-03-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020
6U6T
DownloadVisualize
BU of 6u6t by Molmil
Neuronal growth regulator 1 (NEGR1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neuronal growth regulator 1, ...
著者Machius, M, Venkannagari, H, Misra, A, Rudenko, G.
登録日2019-08-30
公開日2020-08-12
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Highly Conserved Molecular Features in IgLONs Contrast Their Distinct Structural and Biological Outcomes.
J.Mol.Biol., 432, 2020
6U4P
DownloadVisualize
BU of 6u4p by Molmil
Structure-based discovery of a novel small-molecule inhibitor of methicillin-resistant S. aureus
分子名称: Alpha-hemolysin, SULFATE ION, fos-choline-14
著者Liu, J, Kozhaya, L, Torres, V.J, Unutmaz, D, Lu, M.
登録日2019-08-26
公開日2020-03-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
J.Biol.Chem., 295, 2020

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon