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PDB: 51689 件

5T4K
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PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
分子名称: (4S)-5-fluoro-4-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]pentanoic acid, HTH-type transcriptional regulatory protein GabR
著者Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
登録日2016-08-29
公開日2017-03-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.245 Å)
主引用文献PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8EAF
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SsoMCM hexamer bound to Mg/ADP-BeFx and 12-mer oligo-dT. Class 1
分子名称: 12-mer oligo dT, MAGNESIUM ION, Minichromosome maintenance protein MCM, ...
著者Meagher, M, Myasnikov, A, Enemark, E.J.
登録日2022-08-29
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Two Distinct Modes of DNA Binding by an MCM Helicase Enable DNA Translocation.
Int J Mol Sci, 23, 2022
1KWS
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CRYSTAL STRUCTURE OF BETA1,3-GLUCURONYLTRANSFERASE I IN COMPLEX WITH THE ACTIVE UDP-GLCUA DONOR
分子名称: BETA-1,3-GLUCURONYLTRANSFERASE 3, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
著者Pedersen, L.C, Darden, T.A, Negishi, M.
登録日2002-01-30
公開日2002-06-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of beta 1,3-glucuronyltransferase I in complex with active donor substrate UDP-GlcUA.
J.Biol.Chem., 277, 2002
5T4M
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Crystal Structure of Human Protocadherin-15 EC3-5
分子名称: CALCIUM ION, CHLORIDE ION, Protocadherin-15
著者Powers, R.E, Gaudet, R, Sotomayor, M.
登録日2016-08-29
公開日2017-02-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献A Partial Calcium-Free Linker Confers Flexibility to Inner-Ear Protocadherin-15.
Structure, 25, 2017
5T4O
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Autoinhibited E. coli ATP synthase state 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
著者Sobti, M, Smits, C, Wong, A.S.W, Ishmukhametov, R, Stock, D, Sandin, S, Stewart, A.G.
登録日2016-08-29
公開日2016-12-28
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Cryo-EM structures of the autoinhibitedE. coliATP synthase in three rotational states.
Elife, 5, 2016
5KED
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Structure of the 2.65 Angstrom P2(1) crystal of K. pneumonia MrkH
分子名称: Flagellar brake protein YcgR
著者Schumacher, M.
登録日2016-06-09
公開日2016-08-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献To be released: Structures of K. pneumonia MrkH: dual utilization of the PilZ fold for c-di-GMP and DNA binding by a novel activator of biofilm genes
To Be Published
5G4K
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Phloroglucinol reductase from Clostridium sp. apo-form
分子名称: OXIDOREDUCTASE, SHORT CHAIN DEHYDROGENASE/REDUCTASE FAMILY PROTEIN
著者Conradt, D, Hermann, B, Gerhardt, S, Einsle, O, Mueller, M.
登録日2016-05-13
公開日2016-12-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Biocatalytic Properties and Structural Analysis of Phloroglucinol Reductases.
Angew.Chem.Int.Ed.Engl., 55, 2016
5T6P
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Crystal structure of therapeutic mAB AR20.5 in complex with MUC1 peptide
分子名称: Fab Fragment - Heavy Chain, Fab fragment AR20.5 - Light Chain, MUC1 Peptide Fragment
著者Brooks, C.L, Movahedin, M.
登録日2016-09-01
公開日2017-01-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Glycosylation of MUC1 influences the binding of a therapeutic antibody by altering the conformational equilibrium of the antigen.
Glycobiology, 27, 2017
5G50
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Vibrio cholerae scaffolding protein RbmA in complex with magnesium.
分子名称: MAGNESIUM ION, RBMA
著者Maestre-Reyna, M, Wu, W.-J, Lee, C.-C, Wang, A.H.-J.
登録日2016-05-18
公開日2017-11-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Phosphate-Dependent Rbma Autoproteolysis is Involved in Biofilm Dispersal of Vibrio Cholerae
To be Published
5T74
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Human carboanhydrase F131C_C206S double mutant in complex with 14
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[2,5-bis(oxidanylidene)pyrrol-1-yl]-~{N}-(4-sulfamoylphenyl)ethanamide, 4-(HYDROXYMERCURY)BENZOIC ACID, ...
著者DuBay, K.H, Iwan, K, Osorio-Planes, L, Geissler, P, Groll, M, Trauner, D, Broichhagen, J.
登録日2016-09-02
公開日2017-09-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献A Predictive Approach for the Optical Control of Carbonic Anhydrase II Activity.
ACS Chem. Biol., 13, 2018
1BTT
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THE SOLUTION STRUCTURES OF THE FIRST AND SECOND TRANSMEMBRANE-SPANNING SEGMENTS OF BAND 3
分子名称: BAND 3 ANION TRANSPORT PROTEIN
著者Gargaro, A.R, Bloomberg, G.B, Dempsey, C.E, Murray, M, Tanner, M.J.A.
登録日1994-08-03
公開日1994-12-20
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献The solution structures of the first and second transmembrane-spanning segments of band 3.
Eur.J.Biochem., 221, 1994
2O8P
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Crystal structure of a putative 14-3-3 protein from Cryptosporidium parvum, cgd7_2470
分子名称: 14-3-3 domain containing protein
著者Dong, A, Lew, J, Wasney, G, Lin, L, Hassanali, A, Zhao, Y, Vedadi, M, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Walker, J.R, Bochkarev, A, Hui, R, Brokx, S.J, Structural Genomics Consortium (SGC)
登録日2006-12-12
公開日2007-01-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Characterization of 14-3-3 proteins from Cryptosporidium parvum.
Plos One, 6, 2011
5T6I
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CRYSTAL STRUCTURE OF TGCDPK1 FROM TOXOPLASMA GONDII COMPLEXED WITH 5GB
分子名称: 4-(3-methylphenyl)-5-(1,5-naphthyridin-2-yl)-1,3-thiazol-2-amine, Calmodulin-domain protein kinase 1
著者Jiang, D.Q, Tempel, W, Walker, J.R, El Bakkouri, M, Loppnau, P, Graslund, S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Lovato, D.V, Osman, K.T, Structural Genomics Consortium (SGC)
登録日2016-09-01
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal Structure of CDPK1 from toxoplasma gondii complexed with SGC-1-19
to be published
5T7N
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BU of 5t7n by Molmil
X-ray crystal structure of AA13 LPMO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, AoAA13, ZINC ION, ...
著者Frandsen, K.E.H, Poulsen, J.-C.N, Tovborg, M, Johansen, K.S, Lo Leggio, L.
登録日2016-09-05
公開日2017-01-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Learning from oligosaccharide soaks of crystals of an AA13 lytic polysaccharide monooxygenase: crystal packing, ligand binding and active-site disorder.
Acta Crystallogr D Struct Biol, 73, 2017
1BTR
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BU of 1btr by Molmil
THE SOLUTION STRUCTURES OF THE FIRST AND SECOND TRANSMEMBRANE-SPANNING SEGMENTS OF BAND 3
分子名称: BAND 3 ANION TRANSPORT PROTEIN
著者Gargaro, A.R, Bloomberg, G.B, Dempsey, C.E, Murray, M, Tanner, M.J.A.
登録日1993-05-25
公開日1994-12-20
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献The solution structures of the first and second transmembrane-spanning segments of band 3.
Eur.J.Biochem., 221, 1994
5V2V
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Ethylene forming enzyme in complex with nickel
分子名称: 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, NICKEL (II) ION
著者Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
登録日2017-03-06
公開日2017-08-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
5V2Y
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Ethylene forming enzyme in complex with manganese, 2-oxoglutarate and L-arginine
分子名称: 2-OXOGLUTARIC ACID, 2-oxoglutarate-dependent ethylene/succinate-forming enzyme, ARGININE, ...
著者Fellner, M, Martinez, S, Hu, J, Hausinger, R.P.
登録日2017-03-06
公開日2017-08-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.428 Å)
主引用文献Structures and Mechanisms of the Non-Heme Fe(II)- and 2-Oxoglutarate-Dependent Ethylene-Forming Enzyme: Substrate Binding Creates a Twist.
J. Am. Chem. Soc., 139, 2017
5IL9
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Crystal structure of Deg9
分子名称: GLYCEROL, Protease Do-like 9
著者Ouyang, M, Liu, L, Li, X.Y, Zhao, S, Zhang, L.X.
登録日2016-03-04
公開日2017-03-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The crystal structure of Deg9 reveals a novel octameric-type HtrA protease
Nat Plants, 3, 2017
8EDP
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Crystal structure of a three-tetrad, parallel, and K+ stabilized homopurine G-quadruplex from human chromosome 7
分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*AP*GP*GP*GP*AP*AP*AP*AP*GP*GP*GP*GP*AP*GP*GP*GP*AP*AP*AP*AP*GP*GP*GP*G)-3'), N-METHYLMESOPORPHYRIN, ...
著者Ye, M, Yatsunyk, L.A.
登録日2022-09-05
公開日2022-12-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Homopurine guanine-rich sequences in complex with N-methyl mesoporphyrin IX form parallel G-quadruplex dimers and display a unique symmetry tetrad.
Bioorg.Med.Chem., 77, 2022
1BV2
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LIPID TRANSFER PROTEIN FROM RICE SEEDS, NMR, 14 STRUCTURES
分子名称: NONSPECIFIC LIPID TRANSFER PROTEIN
著者Poznanski, J, Sodano, P, Suh, S.W, Lee, J.Y, Ptak, M, Vovelle, F.
登録日1998-09-21
公開日1999-05-18
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献Solution structure of a lipid transfer protein extracted from rice seeds. Comparison with homologous proteins.
Eur.J.Biochem., 259, 1999
5GQP
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Thaumatin Structure at pH 8.0, orthorhombic type1
分子名称: Thaumatin I
著者Masuda, T, Sano, A, Murata, K, Okubo, K, Suzuki, M, Mikami, B.
登録日2016-08-08
公開日2017-08-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.296 Å)
主引用文献Thaumatin Structure at pH 8.0, orthorhombic type1
To Be Published
1BTB
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BU of 1btb by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE AND 13C ASSIGNMENTS OF BARSTAR USING NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
分子名称: BARSTAR
著者Lubienski, M.J, Bycroft, M, Freund, S.M.V, Fersht, A.R.
登録日1994-05-09
公開日1994-07-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure and 13C assignments of barstar using nuclear magnetic resonance spectroscopy.
Biochemistry, 33, 1994
5IM1
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Tobacco 5-epi-aristolochene synthase without buffer molecule in the active site
分子名称: 5-epi-aristolochene synthase
著者Koo, H.J, Louie, G.V, Xu, Y, Bowman, M, Noel, J.P.
登録日2016-03-05
公開日2017-03-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Small-molecule buffer components can directly affect terpene-synthase activity by interacting with the substrate-binding site of the enzyme
To Be Published
5GAG
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RNC in complex with SRP-SR in the closed state
分子名称: 1A9L SS, 23S rRNA, 50S ribosomal protein L10, ...
著者Jomaa, A, Boehringer, D, Leibundgut, M, Ban, N.
登録日2015-11-26
公開日2016-01-27
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon.
Nat Commun, 7, 2016
1BM0
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CRYSTAL STRUCTURE OF HUMAN SERUM ALBUMIN
分子名称: SERUM ALBUMIN
著者Sugio, S, Kashima, A, Mochizuki, S, Noda, M, Kobayashi, K.
登録日1998-07-28
公開日1999-07-28
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of human serum albumin at 2.5 A resolution.
Protein Eng., 12, 1999

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