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PDB: 51689 件

6PRV
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58nt RNA L11-binding domain from E. coli 23S rRNA
分子名称: 23S rRNA, MAGNESIUM ION, POTASSIUM ION
著者Conn, G.L, Dunstan, M.S.
登録日2019-07-11
公開日2020-01-08
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Ribosomal Protein L11 Selectively Stabilizes a Tertiary Structure of the GTPase Center rRNA Domain.
J.Mol.Biol., 432, 2020
5AC4
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GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with GalNAc
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, N-ACETYL-BETA-D-GLUCOSAMINIDASE
著者Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
登録日2015-08-11
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
5FJN
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Structure of L-Amino acid deaminase from Proteus myxofaciens in complex with anthranilate
分子名称: 2-AMINOBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, L-AMINO ACID DEAMINASE
著者Motta, P, Molla, G, Pollegioni, L, Nardini, M.
登録日2015-10-11
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure-Function Relationships in L-Amino Acid Deaminase, a Flavoprotein Belonging to a Novel Class of Biotechnologically Relevant Enzymes
J.Biol.Chem., 291, 2016
5JJJ
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Structure of the SRII/HtrII Complex in P64 space group ("U" shape)
分子名称: EICOSANE, RETINAL, Sensory rhodopsin II transducer, ...
著者Ishchenko, A, Round, E, Borshchevskiy, V, Grudinin, S, Gushchin, I, Klare, J, Remeeva, A, Polovinkin, V, Utrobin, P, Balandin, T, Engelhard, M, Bueldt, G, Gordeliy, V.
登録日2016-04-24
公開日2017-02-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献New Insights on Signal Propagation by Sensory Rhodopsin II/Transducer Complex.
Sci Rep, 7, 2017
1AKR
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G61A OXIDIZED FLAVODOXIN MUTANT
分子名称: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
著者Mccarthy, A, Walsh, M, Higgins, T.
登録日1997-05-27
公開日1998-05-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Modulation of the redox potentials of FMN in Desulfovibrio vulgaris flavodoxin: thermodynamic properties and crystal structures of glycine-61 mutants.
Biochemistry, 37, 1998
1AKW
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G61L OXIDIZED FLAVODOXIN MUTANT
分子名称: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
著者Mccarthy, A, Walsh, M, Higgins, T.
登録日1997-05-27
公開日1998-05-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Modulation of the redox potentials of FMN in Desulfovibrio vulgaris flavodoxin: thermodynamic properties and crystal structures of glycine-61 mutants.
Biochemistry, 37, 1998
5OGQ
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Structure of cathepsin B1 from Schistosoma mansoni in complex with WRR391 inhibitor
分子名称: ACETATE ION, Cathepsin B-like peptidase (C01 family), ethyl 1-[[(2~{S})-3-(4-hydroxyphenyl)-1-oxidanylidene-1-[[(3~{S})-1-phenyl-5-pyridin-2-ylsulfonyl-pentan-3-yl]amino]propan-2-yl]carbamoyl]piperidine-4-carboxylate
著者Jilkova, A, Rezacova, P, Brynda, J, Mares, M.
登録日2017-07-13
公開日2018-11-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Druggable Hot Spots in the Schistosomiasis Cathepsin B1 Target Identified by Functional and Binding Mode Analysis of Potent Vinyl Sulfone Inhibitors.
Acs Infect Dis., 2020
5FJM
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Structure of L-Amino acid deaminase from Proteus myxofaciens
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, L-AMINO ACID DEAMINASE
著者Motta, P, Molla, G, Pollegioni, L, Nardini, M.
登録日2015-10-11
公開日2016-04-06
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-Function Relationships in L-Amino Acid Deaminase, a Flavoprotein Belonging to a Novel Class of Biotechnologically Relevant Enzymes
J.Biol.Chem., 291, 2016
1JD8
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Solution structure of lactam analogue DapD of HIV gp41 600-612 loop
分子名称: Transmembrane protein gp41
著者Phan Chan Du, A, Limal, D, Semetey, V, Dali, H, Jolivet, M, Desgranges, C, Cung, M.T, Briand, J.P, Petit, M.C, Muller, S.
登録日2001-06-13
公開日2003-07-01
最終更新日2018-10-10
実験手法SOLUTION NMR
主引用文献Structural and immunological characterisation of heteroclitic peptide analogues corresponding to the 600-612 region of the HIV envelope gp41 glycoprotein.
J.Mol.Biol., 323, 2002
5JMB
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The Crystal structure of the N-terminal domain of a novel cellulases from Bacteroides coprocola
分子名称: Uncharacterized protein
著者Tan, K, Gu, M, Jedrzejczak, R, Joachimiak, A.
登録日2016-04-28
公開日2016-06-29
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The Crystal structure of the N-terminal domain of a novel cellulases from Bacteroides coprocola (CASP target)
To Be Published
6FWJ
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Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with alpha-Glc-1,3-(1,2-anhydro-carba-mannosamine) and alpha-1,2-mannobiose
分子名称: (1~{R},2~{R},3~{R},4~{R},6~{R})-4-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3-diol, ACETATE ION, Glycosyl hydrolase family 71, ...
著者Sobala, L.F, Speciale, G, Hakki, Z, Fernandes, P.Z, Raich, L, Rojas-Cervellera, V, Bennet, A, Thompson, A.J, Bernardo-Seisdedos, G, Millet, O, Zhu, S, Lu, D, Sollogoub, M, Rovira, C, Jimenez-Barbero, J, Davies, G.J, Williams, S.J.
登録日2018-03-06
公開日2019-09-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献An Epoxide Intermediate in Glycosidase Catalysis.
Acs Cent.Sci., 6, 2020
5FUV
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catalytic domain of Thymidine kinase from Trypanosoma brucei with dThd
分子名称: GLYCEROL, PHOSPHATE ION, THYMDINE KINASE, ...
著者Timm, J, Valente, M, Castillo-Acosta, V, Balzarini, T, Nettleship, J.E, Rada, H, Wilson, K.S, Gonzalez-Pacanowska, D.
登録日2016-01-31
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cell Cycle Regulation and Novel Structural Features of Thymidine Kinase, an Essential Enzyme in Trypanosoma Brucei.
Mol.Microbiol., 102, 2016
4L91
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Crystal structure of Human Hsp90 with X29
分子名称: 4-(6-bromo[1,2,4]triazolo[4,3-a]pyridin-3-yl)-6-chlorobenzene-1,3-diol, Heat shock protein HSP 90-alpha
著者Li, J, Ren, J, Yang, M, Xiong, B, He, J.
登録日2013-06-18
公開日2014-06-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Identification of a new series of potent diphenol HSP90 inhibitors by fragment merging and structure-based optimization
Bioorg.Med.Chem.Lett., 24, 2014
7QW4
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Pden_5119 protein
分子名称: NADPH-dependent FMN reductase
著者Kryl, M, Sedlacek, V.
登録日2022-01-24
公開日2023-02-08
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Insight into Catalysis by the Flavin-Dependent NADH Oxidase (Pden_5119) of Paracoccus denitrificans .
Int J Mol Sci, 24, 2023
5JQQ
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Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis - apo form
分子名称: GLYCEROL, Glucosyl-3-phosphoglycerate synthase
著者Albesa-Jove, D, Urresti, S, Gest, P.M, van der Woerd, M, Jackson, M, Guerin, M.E.
登録日2016-05-05
公開日2016-12-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis - apo form
To Be Published
1AAP
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X-RAY CRYSTAL STRUCTURE OF THE PROTEASE INHIBITOR DOMAIN OF ALZHEIMER'S AMYLOID BETA-PROTEIN PRECURSOR
分子名称: ALZHEIMER'S DISEASE AMYLOID A4 PROTEIN
著者Hynes, T.R, Randal, M, Kennedy, L.A, Eigenbrot, C, Kossiakoff, A.A.
登録日1990-09-14
公開日1991-10-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献X-ray crystal structure of the protease inhibitor domain of Alzheimer's amyloid beta-protein precursor.
Biochemistry, 29, 1990
8D45
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Cryo-EM structure of human Kidney Betaine-Homocysteine Methyltransferase
分子名称: Betaine--homocysteine S-methyltransferase 1
著者Lyu, M, Yu, E.W.
登録日2022-06-01
公開日2022-11-16
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Cryo-EM structure of human Kidney Betaine-Homocysteine Methyltransferase
To Be Published
5JRB
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Rad52(1-212) K102A/K133A/E202A mutant
分子名称: DNA repair protein RAD52 homolog
著者Saotome, M, Saito, K, Kurumizaka, H, Kagawa, W.
登録日2016-05-06
公開日2016-08-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.405 Å)
主引用文献Structure of the human DNA-repair protein RAD52 containing surface mutations.
Acta Crystallogr.,Sect.F, 72, 2016
5JRO
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The crystal structure of azoreductase from Yersinia pestis CO92 in its Apo form
分子名称: FMN-dependent NADH-azoreductase, GLYCEROL
著者Tan, K, Gu, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-05-06
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献The crystal structure of azoreductase from Yersinia pestis CO92 in its Apo form
To Be Published
8DF5
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SARS-CoV-2 Beta RBD in complex with human ACE2 and S304 Fab and S309 Fab
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者McCallum, M, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G, Veesler, D.
登録日2022-06-21
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Shifting mutational constraints in the SARS-CoV-2 receptor-binding domain during viral evolution.
Science, 377, 2022
5A69
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GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with Gal-PUGNAc
分子名称: N-ACETYL-BETA-D-GLUCOSAMINIDASE, [(Z)-[(3R,4R,5R,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-ylidene]amino] N-phenylcarbamate
著者Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
登録日2015-06-24
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
5UPY
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Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Listeria Monocytogenes in the complex with IMP and Q21
分子名称: (2S)-2-(naphthalen-1-yloxy)-N-[2-(pyridin-4-yl)-1,3-benzoxazol-5-yl]propanamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Kim, Y, Makowska-Grzyska, M, Osipiuk, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2017-02-04
公開日2017-04-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Listeria Monocytogenes in the complex with IMP and Q21
To Be Published
6FYH
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Disulfide between ubiquitin G76C and the E3 HECT ligase Huwe1
分子名称: E3 ubiquitin-protein ligase HUWE1, Polyubiquitin-B, SULFATE ION, ...
著者Jaeckl, M, Hartmann, M.D, Wiesner, S.
登録日2018-03-12
公開日2018-07-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.906 Å)
主引用文献beta-Sheet Augmentation Is a Conserved Mechanism of Priming HECT E3 Ligases for Ubiquitin Ligation.
J. Mol. Biol., 430, 2018
1JAR
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Solution structure of lactam analogue (DDab)of HIV gp41 600-612 loop.
分子名称: DDab: (ACE)IWGDSGKLI(DAB)TTA ANALOGUE OF HIV GP41
著者Phan Chan Du, A, Limal, D, Semetey, V, Dali, H, Jolivet, M, Desgranges, C, Cung, M.T, Briand, J.P, Petit, M.C, Muller, S.
登録日2001-05-31
公開日2003-07-01
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Structural and immunological characterisation of heteroclitic peptide analogues corresponding to the 600-612 region of the HIV envelope gp41 glycoprotein.
J.Mol.Biol., 323, 2002
5JTS
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Structure of a beta-1,4-mannanase, SsGH134.
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Jin, Y, Petricevic, M, Goddard-Borger, E.D, Williams, S.J, Davies, G.J.
登録日2016-05-09
公開日2016-11-16
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献A beta-Mannanase with a Lysozyme-like Fold and a Novel Molecular Catalytic Mechanism.
ACS Cent Sci, 2, 2016

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件を2024-09-04に公開中

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