Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 51964 件

2YQF
DownloadVisualize
BU of 2yqf by Molmil
Solution structure of the death domain of Ankyrin-1
分子名称: Ankyrin-1
著者Tanabe, W, Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-30
公開日2008-04-01
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the death domain of Ankyrin-1
To be Published
5F5E
DownloadVisualize
BU of 5f5e by Molmil
The Crystal Structure of MLL1 SET domain with N3816I/Q3867L mutation
分子名称: Histone-lysine N-methyltransferase 2A, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
著者Li, Y, Lei, M, Chen, Y.
登録日2015-12-04
公開日2016-02-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Structural basis for activity regulation of MLL family methyltransferases.
Nature, 530, 2016
5ILA
DownloadVisualize
BU of 5ila by Molmil
Deg9 protease domain
分子名称: Protease Do-like 9
著者Ouyang, M, Liu, L, Li, X.Y, Zhao, S, Zhang, L.X.
登録日2016-03-04
公開日2017-03-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献The crystal structure of Deg9 reveals a novel octameric-type HtrA protease
Nat Plants, 3, 2017
2YRR
DownloadVisualize
BU of 2yrr by Molmil
hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8
分子名称: Aminotransferase, class V, PYRIDOXAL-5'-PHOSPHATE
著者Miyahara, I, Matsumura, M, Goto, M, Omi, R, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-02
公開日2008-04-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8
To be Published
3TLW
DownloadVisualize
BU of 3tlw by Molmil
The GLIC pentameric Ligand-Gated Ion Channel Loop2-21' oxidized mutant in a locally-closed conformation (LC2 subtype)
分子名称: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Glr4197 protein
著者Sauguet, L, Nury, H, Corringer, P.J, Delarue, M.
登録日2011-08-30
公開日2012-05-16
最終更新日2012-06-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A locally closed conformation of a bacterial pentameric proton-gated ion channel.
Nat.Struct.Mol.Biol., 19, 2012
8IP1
DownloadVisualize
BU of 8ip1 by Molmil
Escherichia coli OpgD mutant-D388N with beta-1,2-glucan
分子名称: DI(HYDROXYETHYL)ETHER, Glucans biosynthesis protein D, TRIETHYLENE GLYCOL, ...
著者Motouchi, S, Nakajima, M.
登録日2023-03-13
公開日2024-03-13
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Identification of enzymatic functions of osmo-regulated periplasmic glucan biosynthesis proteins from Escherichia coli reveals a novel glycoside hydrolase family.
Commun Biol, 6, 2023
5I3T
DownloadVisualize
BU of 5i3t by Molmil
Native Structure of the Linalool Dehydratase-Isomerase from Castellaniella defragrans
分子名称: 1,3-BUTANEDIOL, CHLORIDE ION, Linalool dehydratase/isomerase, ...
著者LaMattina, J.W, Carlock, M, Koch, D.J, Lanzilotta, W.N.
登録日2016-02-11
公開日2016-06-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Native Structure of the Linalool Dehydratase-Isomerase from Castellaniella defragrans
To Be Published
7QO2
DownloadVisualize
BU of 7qo2 by Molmil
Peptide GAKSAA in complex with human cathepsin V C25A mutant
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Cathepsin L2, ...
著者Loboda, J, Sosnowski, P, Tusar, L, Vidmar, R, Vizovisek, M, Horvat, J, Kosec, G, Impens, F, Demol, H, Turk, B, Gevaert, K, Turk, D.
登録日2021-12-23
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Peptide GAKSAA in complex with human cathepsin V C25A mutant
To Be Published
7QUG
DownloadVisualize
BU of 7qug by Molmil
Crystal structure of carbon-sulfur lyase FnaPatB1 from Fusobacterium nucleatum subspecies animalis in complex with allyl-cysteine
分子名称: ACETATE ION, CACODYLATE ION, allyl-cysteine, ...
著者Schwartz, M.
登録日2022-01-18
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Metabolism of Cysteine Conjugates and Production of Flavor Sulfur Compounds by a Carbon-Sulfur Lyase from the Oral Anaerobe Fusobacterium nucleatum.
J.Agric.Food Chem., 70, 2022
5F6B
DownloadVisualize
BU of 5f6b by Molmil
Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W mutant of human Cellular Retinol Binding Protein II in complex with All-trans-Retinal at 1.3 Angstrom Resolution
分子名称: ACETATE ION, RETINAL, Retinol-binding protein 2
著者Nosrati, M, Nossoni, Z, Geiger, J.H.
登録日2015-12-05
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Crystal structure of the Q108K:K40L:T51V:R58Y:Y19W mutant of human Cellular Retinol Binding ProteinII in complex with All-trans-Retinal at 1.31 Angstrom Resolution
To Be Published
6XPH
DownloadVisualize
BU of 6xph by Molmil
CutR dimer with domain swap
分子名称: Ethanolamine utilization protein EutS, GLYCEROL, POTASSIUM ION, ...
著者Ochoa, J.M, Sawaya, M.R, Nguyen, V.N, Duilio, C, Yeates, T.O, Nie, M.
登録日2020-07-08
公開日2020-07-22
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.
Protein Sci., 29, 2020
2YWQ
DownloadVisualize
BU of 2ywq by Molmil
Crystal structure of Thermus thermophilus Protein Y N-terminal domain
分子名称: Ribosomal subunit interface protein
著者Kawazoe, M, Takemoto, C, Kaminishi, T, Tatsuguchi, A, Saito, Y, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-21
公開日2008-04-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Crystal structure of Thermus thermophilus Protein Y N-terminal domain
To be Published
5OXU
DownloadVisualize
BU of 5oxu by Molmil
Direct-evolutioned unspecific peroxygenase from Agrocybe aegerita
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Aromatic peroxygenase, CHLORIDE ION, ...
著者Ramirez-Escudero, M, Sanz-Aparicio, J.
登録日2017-09-07
公開日2018-12-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural Insights into the Substrate Promiscuity of a Laboratory-Evolved Peroxygenase.
Acs Chem.Biol., 13, 2018
6XR4
DownloadVisualize
BU of 6xr4 by Molmil
Integrative in situ structure of Parkinsons disease-linked human LRRK2
分子名称: Leucine-rich repeat serine/threonine-protein kinase 2
著者Villa, E, Lasker, K, Audagnotto, M.
登録日2020-07-10
公開日2020-08-19
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献The In Situ Structure of Parkinson's Disease-Linked LRRK2.
Cell, 182, 2020
5EWG
DownloadVisualize
BU of 5ewg by Molmil
Ternary complex of human DNA polymerase eta inserting rATP opposite an 8-Oxodeoxyguanosine Lesion
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ...
著者Su, Y, Egli, M, Guengerich, F.P.
登録日2015-11-20
公開日2016-01-13
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mechanism of Ribonucleotide Incorporation by Human DNA Polymerase eta.
J.Biol.Chem., 291, 2016
7QRK
DownloadVisualize
BU of 7qrk by Molmil
Human Carbonic Anhydrase II in complex with N-(2-aminophenyl)-4-((2-oxo-2-((4-sulfamoylphenethyl)amino)ethyl)amino)benzamide
分子名称: Carbonic anhydrase 2, GLYCEROL, N-(2-aminophenyl)-4-((2-oxo-2-((4-sulfamoylphenethyl)amino)ethyl)amino)benzamide, ...
著者Angeli, A, Ferraroni, M.
登録日2022-01-11
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.428 Å)
主引用文献Human Carbonic Anhydrase II in complex with N-(2-aminophenyl)-4-((2-oxo-2-((4-sulfamoylphenethyl)amino)ethyl)amino)benzamide
To Be Published
5I6F
DownloadVisualize
BU of 5i6f by Molmil
Crystal structure of C-terminal variant 1 of Chaetomium thermophilum acetyl-CoA carboxylase
分子名称: Acetyl-CoA carboxylase-like protein
著者Hunkeler, M, Stuttfeld, E, Hagmann, A, Imseng, S, Maier, T.
登録日2016-02-16
公開日2016-04-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献The dynamic organization of fungal acetyl-CoA carboxylase.
Nat Commun, 7, 2016
2YKL
DownloadVisualize
BU of 2ykl by Molmil
Structure of human anti-nicotine Fab fragment in complex with nicotine-11-yl-methyl-(4-ethylamino-4-oxo)-butanoate
分子名称: FAB FRAGMENT, HEAVY CHAIN, LIGHT CHAIN, ...
著者Tars, K, Kotelovica, S, Lipowsky, G, Bauer, M, Beerli, R, Bachmann, M, Maurer, P.
登録日2011-05-27
公開日2011-11-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Different Binding Modes of Free and Carrier-Protein-Coupled Nicotine in a Human Monoclonal Antibody.
J.Mol.Biol., 415, 2012
5I7D
DownloadVisualize
BU of 5i7d by Molmil
Crystal Structure of srGAP2 F-BARx WT Form-2
分子名称: SLIT-ROBO Rho GTPase-activating protein 2
著者Sporny, M, Guez-Haddad, J, Isupov, M.N, Opatowsky, Y.
登録日2016-02-17
公開日2017-08-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.95 Å)
主引用文献Structural Basis for srGAP2 Membrane Interactions, and Antagonism by the Human Specific Paralog srGAP2C
To Be Published
2YQ9
DownloadVisualize
BU of 2yq9 by Molmil
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation V321A, crystallized with 2'-AMP
分子名称: 2', 3'-CYCLIC-NUCLEOTIDE 3'-PHOSPHODIESTERASE, ADENOSINE-2'-MONOPHOSPHATE
著者Myllykoski, M, Raasakka, A, Lehtimaki, M, Han, H, Kursula, P.
登録日2012-11-07
公開日2013-07-10
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic Analysis of the Reaction Cycle of 2',3'-Cyclic Nucleotide 3'-Phosphodiesterase, a Unique Member of the 2H Phosphoesterase Family
J.Mol.Biol., 425, 2013
2L07
DownloadVisualize
BU of 2l07 by Molmil
1H, 13C, and 15N chemical shifts and structure of brazzein-derived peptide CKR-PNG
分子名称: Defensin-like protein
著者Dittli, S.M, Assadi-Porter, F.M, Rao, H, Tonelli, M.
登録日2010-06-30
公開日2011-06-22
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural role of the terminal disulfide bond in the sweetness of brazzein.
Chem Senses, 36, 2011
6X6T
DownloadVisualize
BU of 6x6t by Molmil
Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Ebright, R.H, Wang, C, Su, M.
登録日2020-05-29
公開日2020-09-02
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
3TTF
DownloadVisualize
BU of 3ttf by Molmil
Crystal structure of E. coli HypF with AMP and carbamoyl phosphate
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Transcriptional regulatory protein, ...
著者Petkun, S, Shi, R, Li, Y, Cygler, M.
登録日2011-09-14
公開日2011-12-28
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structure of Hydrogenase Maturation Protein HypF with Reaction Intermediates Shows Two Active Sites.
Structure, 19, 2011
1HW5
DownloadVisualize
BU of 1hw5 by Molmil
THE CAP/CRP VARIANT T127L/S128A
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CATABOLITE GENE ACTIVATOR
著者Chu, S.Y, Tordova, M, Gilliland, G.L, Gorshkova, I, Shi, Y.
登録日2001-01-09
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献The structure of the T127L/S128A mutant of cAMP receptor protein facilitates promoter site binding
J.Biol.Chem., 276, 2001
5EXQ
DownloadVisualize
BU of 5exq by Molmil
Human cytochrome c Y48H
分子名称: Cytochrome c, HEME C, SULFATE ION
著者Fellner, M, Jameson, G.N.L, Ledgerwood, E.C, Wilbanks, S.M.
登録日2015-11-24
公開日2016-11-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Altered structure and dynamics of pathogenic cytochrome c variants correlate with increased apoptotic activity.
Biochem.J., 2021

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon