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PDB: 52161 results

7QUX
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BU of 7qux by Molmil
Crystal structure of P7C8 bound to CK2alpha
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CARBAMIC ACID, Casein kinase II subunit alpha, ...
Authors:Atkinson, E, Iegre, J, Brear, P, Baker, D, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2022-01-19
Release date:2022-12-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Development of small cyclic peptides targeting the CK2 alpha / beta interface.
Chem.Commun.(Camb.), 58, 2022
8Z5L
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BU of 8z5l by Molmil
Crystal structure of metallo-beta-lactamse, IMP-1, complexed with a quinolinone-based inhibitor
Descriptor: 3-[2-azanyl-5-[2-cyclohexylethyl-[3-(4-methylphenoxy)propyl]amino]phenyl]propanoic acid, Metallo-beta-lactamase type 2, ZINC ION
Authors:Kamo, T, Kuroda, K, Nimura, S, Guo, Y, Kondo, S, Nukaga, M, Hoshino, T.
Deposit date:2024-04-18
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Development of Inhibitory Compounds for Metallo-beta-lactamase through Computational Design and Crystallographic Analysis.
Biochemistry, 63, 2024
4M3P
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BU of 4m3p by Molmil
Betaine-Homocysteine S-Methyltransferase from Homo sapiens complexed with Homocysteine
Descriptor: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Betaine--homocysteine S-methyltransferase 1, POTASSIUM ION, ...
Authors:Koutmos, M, Yamada, K, Mladkova, J, Paterova, J, Diamond, C.E, Tryon, K, Jungwirth, P, Garrow, T.A, Jiracek, J.
Deposit date:2013-08-06
Release date:2014-06-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Specific potassium ion interactions facilitate homocysteine binding to betaine-homocysteine S-methyltransferase.
Proteins, 82, 2014
4MHR
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BU of 4mhr by Molmil
Crystal structure of EctD from S. alaskensis in its apoform
Descriptor: Ectoine hydroxylase
Authors:Widderich, N, Hoeppner, A, Pittelkow, M, Heider, J, Smits, S.H, Bremer, E.
Deposit date:2013-08-30
Release date:2014-09-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the ectoine hydroxylase, a snapshot of the active site.
J.Biol.Chem., 289, 2014
5J81
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BU of 5j81 by Molmil
Crystal structure of Glycoprotein C from Puumala virus in the post-fusion conformation (pH 6.0)
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ACETATE ION, Envelopment polyprotein, ...
Authors:Willensky, S, Dessau, M.
Deposit date:2016-04-07
Release date:2016-10-05
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Glycoprotein C from a Hantavirus in the Post-fusion Conformation.
Plos Pathog., 12, 2016
5JES
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BU of 5jes by Molmil
Human carbonic anhydrase II (V121T) complexed with benzo[d]thiazole-2-sulfonamide
Descriptor: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
Deposit date:2016-04-18
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.205 Å)
Cite:Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
3ZRX
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BU of 3zrx by Molmil
The high resolution structure of a dimeric Hamp-Dhp fusion displays strong asymmetry
Descriptor: AF1503 PROTEIN, OSMOLARITY SENSOR PROTEIN ENVZ
Authors:Zeth, K, Hulko, M, Martin, J.
Deposit date:2011-06-20
Release date:2011-06-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Mechanism of Regulation of Receptor Histidine Kinases.
Structure, 20, 2012
7QNV
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BU of 7qnv by Molmil
human carbonic anhydrase II bound to 3-methylbenzoselenoate
Descriptor: 3-methylbenzoselenoate, Carbonic anhydrase 2, GLYCEROL, ...
Authors:Angeli, A, Ferraroni, M.
Deposit date:2021-12-22
Release date:2023-01-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.278 Å)
Cite:Benzoselenoates: A novel class of carbonic anhydrase inhibitors.
Bioorg.Chem., 122, 2022
7QOB
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BU of 7qob by Molmil
Human Carbonic Anhydrase I in complex with benzoselenoate
Descriptor: Carbonic anhydrase 1, ZINC ION, benzoselenoate
Authors:Angeli, A, Ferraroni, M.
Deposit date:2021-12-23
Release date:2023-01-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Benzoselenoates: A novel class of carbonic anhydrase inhibitors.
Bioorg.Chem., 122, 2022
5JN2
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BU of 5jn2 by Molmil
Crystal structure of TgCDPK1 bound to NVPACU106
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Calmodulin-domain protein kinase 1, ...
Authors:El Bakkouri, M, Walker, J.R, Loppnau, P, Graslund, S, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Hui, R, Lovato, D.V, Structural Genomics Consortium (SGC)
Deposit date:2016-04-29
Release date:2016-05-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of TgCDPK1 bound to NVPACU106
To Be Published
7XM1
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BU of 7xm1 by Molmil
Cryo-EM structure of mTIP60-Ba (metal-ion induced TIP60 (K67E) complex with barium ions
Descriptor: BARIUM ION, TIP60 K67E mutant
Authors:Ohara, N, Kawakami, N, Arai, R, Adachi, N, Moriya, T, Kawasaki, M, Miyamoto, K.
Deposit date:2022-04-24
Release date:2023-01-04
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (3.96 Å)
Cite:Reversible Assembly of an Artificial Protein Nanocage Using Alkaline Earth Metal Ions.
J.Am.Chem.Soc., 145, 2023
5ITR
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BU of 5itr by Molmil
Crystal Structure of Human NEIL1(P2G) bound to duplex DNA containing THF
Descriptor: DNA (26-MER), Endonuclease 8-like 1
Authors:Zhu, C, Lu, L, Zhang, J, Yue, Z, Song, J, Zong, S, Liu, M, Stovicek, O, Gao, Y, Yi, C.
Deposit date:2016-03-17
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Tautomerization-dependent recognition and excision of oxidation damage in base-excision DNA repair
Proc.Natl.Acad.Sci.USA, 113, 2016
7QVK
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BU of 7qvk by Molmil
NM-02 in complex with HER2-ECD
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, NM-02, Receptor tyrosine-protein kinase erbB-2, ...
Authors:Cowan, R, Hall, G, Carr, M.
Deposit date:2022-01-21
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Co-crystallisation and humanisation of an anti-HER2 single-domain antibody as a theranostic tool.
Plos One, 18, 2023
5IY4
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BU of 5iy4 by Molmil
Crystal structure of human PCNA in complex with the PIP box of DVC1
Descriptor: DVC1 PIP box, Proliferating cell nuclear antigen
Authors:Jiang, T, Xu, M, Wang, Y.
Deposit date:2016-03-24
Release date:2016-06-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.945 Å)
Cite:Crystal structure of human PCNA in complex with the PIP box of DVC1
Biochem.Biophys.Res.Commun., 474, 2016
3ZX0
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BU of 3zx0 by Molmil
NTPDase1 in complex with Heptamolybdate
Descriptor: ACETIC ACID, CHLORIDE ION, ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE 1, ...
Authors:Zebisch, M, Schaefer, P, Straeter, N.
Deposit date:2011-08-04
Release date:2011-11-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic evidence for a domain motion in rat nucleoside triphosphate diphosphohydrolase (NTPDase) 1.
J. Mol. Biol., 415, 2012
5IZN
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BU of 5izn by Molmil
The crystal structure of 50S ribosomal protein L25 from Vibrio vulnificus CMCP6
Descriptor: 50S ribosomal protein L25, PHOSPHATE ION
Authors:Tan, K, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-03-25
Release date:2016-04-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The crystal structure of 50S ribosomal protein L25 from Vibrio vulnificus CMCP6
To Be Published
3ZRW
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BU of 3zrw by Molmil
The structure of the dimeric Hamp-Dhp fusion A291V mutant
Descriptor: AF1503 PROTEIN, OSMOLARITY SENSOR PROTEIN ENVZ
Authors:Zeth, K, Hulko, M, Ferris, H.U, Martin, J, Lupas, A.N.
Deposit date:2011-06-20
Release date:2011-06-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mechanism of Regulation of Receptor Histidine Kinases.
Structure, 20, 2012
5J02
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BU of 5j02 by Molmil
Structure of the lariat form of a chimeric derivative of the Oceanobacillus iheyensis group II intron in the presence of NH4+, MG2+ and an inactive 5' exon.
Descriptor: 5' EXON ANALOG (5'-R(*CP*UP*GP*UP*UP*AP*(5MU))-3'), AMMONIUM ION, GROUP II INTRON LARIAT, ...
Authors:Costa, M, Walbott, H, Monachello, D, Westhof, E, Michel, F.
Deposit date:2016-03-26
Release date:2016-12-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.493 Å)
Cite:Crystal structures of a group II intron lariat primed for reverse splicing.
Science, 354, 2016
5J2W
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BU of 5j2w by Molmil
Intermediate state lying on the pathway of release of Tat from HIV-1 TAR.
Descriptor: Apical region (29mer) of the HIV-1 TAR RNA element, Cyclic peptide mimetic of HIV-1 Tat
Authors:Borkar, A.N, Bardaro Jr, M.F, Varani, G, Vendruscolo, M.
Deposit date:2016-03-30
Release date:2016-06-08
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Structure of a low-population binding intermediate in protein-RNA recognition.
Proc.Natl.Acad.Sci.USA, 113, 2016
7Q4H
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BU of 7q4h by Molmil
A thermostable lipase from Thermoanaerobacter thermohydrosulfuricus in complex with PMSF
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, GLYCEROL, ...
Authors:Pinotsis, N, Wilmanns, M.
Deposit date:2021-10-30
Release date:2023-05-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.00003219 Å)
Cite:Discovery of a non-canonical prototype long-chain monoacylglycerol lipase through a structure-based endogenous reaction intermediate complex.
Nat Commun, 14, 2023
7Q4J
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BU of 7q4j by Molmil
A thermostable lipase from Thermoanaerobacter thermohydrosulfuricus in complex a monoacylglycerol intermediate
Descriptor: CHLORIDE ION, DECANE, GLYCEROL, ...
Authors:Pinotsis, N, Wilmanns, M.
Deposit date:2021-10-31
Release date:2023-05-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Discovery of a non-canonical prototype long-chain monoacylglycerol lipase through a structure-based endogenous reaction intermediate complex.
Nat Commun, 14, 2023
8ZMU
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BU of 8zmu by Molmil
GLUTAMATE DEHYDROGENASE (W89F-MUTANT) FROM THERMOCOCCUS PROFUNDUS IN THE UNLIGANDED STATE
Descriptor: ACETIC ACID, GLYCEROL, Glutamate dehydrogenase, ...
Authors:Wakabayashi, T, Matsui, Y, Masayoshi, M.
Deposit date:2024-05-23
Release date:2024-06-05
Method:X-RAY DIFFRACTION (2.028 Å)
Cite:Mechanism for drastic reduction in catalytic activity of Trp89Phe-mutated glutamate dehydrogenase revealed by cryoEM-sampling metastable conformation in action
To Be Published
3ZR4
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BU of 3zr4 by Molmil
STRUCTURAL EVIDENCE FOR AMMONIA TUNNELING ACROSS THE (BETA-ALPHA)8 BARREL OF THE IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE BIENZYME COMPLEX
Descriptor: GLUTAMINE, GLYCEROL, IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF, ...
Authors:Vega, M.C, Kuper, J, Haeger, M.C, Mohrlueder, J, Marquardt, S, Sterner, R, Wilmanns, M.
Deposit date:2011-06-13
Release date:2012-10-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Catalysis Uncoupling in a Glutamine Amidotransferase Bienzyme by Unblocking the Glutaminase Active Site.
Chem.Biol., 19, 2012
7QAC
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BU of 7qac by Molmil
The T2 structure of polycrystalline cubic human insulin
Descriptor: Insulin A chain, Insulin B chain
Authors:Karavassili, F, Triandafillidis, D.P, Valmas, A, Spiliopoulou, M, Fili, S, Kontou, P, Bowler, M.W, Von Dreele, R.B, Fitch, A, Margiolaki, I.
Deposit date:2021-11-16
Release date:2023-06-21
Last modified:2024-10-09
Method:POWDER DIFFRACTION (2.29 Å)
Cite:The T 2 structure of polycrystalline cubic human insulin.
Acta Crystallogr D Struct Biol, 79, 2023
5JEG
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BU of 5jeg by Molmil
Human carbonic anhydrase II (V121I) complexed with benzo[d]thiazole-2-sulfonamide
Descriptor: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
Deposit date:2016-04-18
Release date:2017-01-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017

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