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PDB: 96845 件

3ZNJ
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Crystal structure of unliganded ClcF from R.opacus 1CP in crystal form 1.
分子名称: 1,2-ETHANEDIOL, 5-CHLOROMUCONOLACTONE DEHALOGENASE, CHLORIDE ION
著者Roth, C, Groening, J.A.D, Kaschabek, S.R, Schloemann, M, Straeter, N.
登録日2013-02-14
公開日2013-03-06
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure and Catalytic Mechanism of Chloromuconolactone Dehalogenase Clcf from Rhodococcus Opacus 1Cp.
Mol.Microbiol., 88, 2013
2Q5E
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Crystal structure of human carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2
分子名称: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2, MAGNESIUM ION
著者Bonanno, J.B, Dickey, M, Bain, K.T, Lau, C, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-05-31
公開日2007-06-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structural genomics of protein phosphatases.
J.Struct.Funct.Genom., 8, 2007
7MBG
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BU of 7mbg by Molmil
SARS-CoV-2 Main protease in orthorhombic space group
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE
著者Fearon, D, Douangamath, A, von Delft, F, Noske, G.D, Nakamura, A.M, Gawriljuk, V.O, Lima, G.M.A, Zeri, A.C.M, Nascimento, A.F.Z, Oliva, G, Godoy, A.S.
登録日2021-03-31
公開日2021-04-07
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献A Crystallographic Snapshot of SARS-CoV-2 Main Protease Maturation Process.
J.Mol.Biol., 433, 2021
3BTI
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BU of 3bti by Molmil
crystal structure of QacR(E58Q) bound to berberine
分子名称: BERBERINE, HTH-type transcriptional regulator qacR, SULFATE ION
著者Schumacher, M.A, Schuman, J.T, Brennan, R.G.
登録日2007-12-28
公開日2008-08-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
7M6B
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The Crystal Structure of Mcbe1
分子名称: 1,2-ETHANEDIOL, S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLMETHIONINE, ...
著者Alahuhta, P.M, Lunin, V.V.
登録日2021-03-25
公開日2021-04-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Target highlights in CASP14: Analysis of models by structure providers.
Proteins, 89, 2021
1QZB
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Coordinates of the A-site tRNA model fitted into the cryo-EM map of 70S ribosome in the pre-translocational state
分子名称: Phe-tRNA
著者Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
3ZMZ
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LSD1-CoREST in complex with PRSFAV peptide
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, PEPTIDE, ...
著者Tortorici, M, Borrello, M.T, Tardugno, M, Chiarelli, L.R, Pilotto, S, Ciossani, G, Vellore, N.A, Cowan, J, O'Connell, M, Mai, A, Baron, R, Ganesan, A, Mattevi, A.
登録日2013-02-13
公開日2013-06-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Protein Recognition by Small Peptide Reversible Inhibitors of the Chromatin-Modifying Lsd1/Corest Lysine Demethylase.
Acs Chem.Biol., 8, 2013
6YT5
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Cryo-EM structure of T7 bacteriophage DNA translocation gp15-gp16 core complex intermediate assembly
分子名称: Internal virion protein gp15, Peptidoglycan transglycosylase gp16
著者Perez-Ruiz, M, Pulido-Cid, M, Luque-Ortega, J.R, Cuervo, A, Carrascosa, J.L.
登録日2020-04-23
公開日2021-09-08
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Assisted assembly of bacteriophage T7 core components for genome translocation across the bacterial envelope.
Proc.Natl.Acad.Sci.USA, 118, 2021
1QZD
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EF-Tu.kirromycin coordinates fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
分子名称: Elongation factor Tu
著者Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
6YSZ
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Cryo-EM structure of T7 bacteriophage DNA translocation gp15 core protein intermediate assembly
分子名称: Internal virion protein gp15
著者Perez-Ruiz, M, Pulido-Cid, M, Luque-Ortega, J.R, Cuervo, A, Carrascosa, J.L.
登録日2020-04-23
公開日2021-09-08
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Assisted assembly of bacteriophage T7 core components for genome translocation across the bacterial envelope.
Proc.Natl.Acad.Sci.USA, 118, 2021
7RNJ
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S2P6 Fab fragment bound to the SARS-CoV/SARS-CoV-2 spike stem helix peptide
分子名称: Monoclonal antibody S2P6 Fab heavy chain, Monoclonal antibody S2P6 Fab light chain, SULFATE ION, ...
著者Snell, G, Czudnochowski, N, Croll, T.I, Nix, J.C, Corti, D, Cameroni, E, Pinto, D, Beltramello, M, Sauer, M.M, Veesler, D.
登録日2021-07-29
公開日2021-08-11
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Broad betacoronavirus neutralization by a stem helix-specific human antibody.
Science, 373, 2021
1QX0
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CONJUGATIVE RELAXASE TRWC IN COMPLEX WITH ORIT DNA. METAL-BOUND STRUCTURE
分子名称: DNA OLIGONUCLEOTIDE, SULFATE ION, ZINC ION, ...
著者Guasch, A, Lucas, M, Moncalian, G, Cabezas, M, Prez-Luque, R, Gomis-Rth, F.X, de la Cruz, F, Coll, M.
登録日2003-09-04
公開日2003-11-25
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献RECOGNITION AND PROCESSING OF THE ORIGIN OF TRANSFER DNA BY CONJUGATIVE RELAXASE TRWC
Nat.Struct.Biol., 10, 2003
1QX8
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Crystal structure of a five-residue deletion mutant of the Rop protein
分子名称: Regulatory protein ROP
著者Glykos, N.M, Vlassi, M, Papanikolaou, Y, Kotsifaki, D, Cesareni, G, Kokkinidis, M.
登録日2003-09-04
公開日2004-09-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Loopless Rop: structure and dynamics of an engineered homotetrameric variant of the repressor of primer protein.
Biochemistry, 45, 2006
5IU9
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Crystal Structure of Zebrafish Protocadherin-19 EC1-4
分子名称: CALCIUM ION, Protocadherin-19 isoform 1, SODIUM ION
著者Cooper, S.R, Jontes, J.D, Sotomayor, M.
登録日2016-03-17
公開日2016-11-02
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.59 Å)
主引用文献Structural determinants of adhesion by Protocadherin-19 and implications for its role in epilepsy.
Elife, 5, 2016
1HXS
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BU of 1hxs by Molmil
CRYSTAL STRUCTURE OF MAHONEY STRAIN OF POLIOVIRUS AT 2.2A RESOLUTION
分子名称: GENOME POLYPROTEIN, COAT PROTEIN VP1, COAT PROTEIN VP2, ...
著者Miller, S.T, Hogle, J.M, Filman, D.J.
登録日2001-01-16
公開日2002-01-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Ab initio phasing of high-symmetry macromolecular complexes: successful phasing of authentic poliovirus data to 3.0 A resolution.
J.Mol.Biol., 307, 2001
3BUA
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BU of 3bua by Molmil
Crystal Structure of TRF2 TRFH domain and APOLLO peptide complex
分子名称: DNA cross-link repair 1B protein, Telomeric repeat-binding factor 2
著者Chen, Y, Yang, Y, van Overbeek, M, Donigian, J.R, Baciu, P, de Lange, T, Lei, M.
登録日2008-01-02
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A shared docking motif in TRF1 and TRF2 used for differential recruitment of telomeric proteins.
Science, 319, 2008
6ZHU
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Yeast Uba1 in complex with Ubc3 and ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ubiquitin-activating enzyme E1 1, ...
著者Misra, M, Schindelin, H.
登録日2020-06-23
公開日2022-01-12
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献ATP induced conformational changes facilitate E1-E2 disulfide bridging in the ubiquitin system
To Be Published
3KMH
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Crystal Structure of a Novel Sugar Isomerase from E. coli O157:H7
分子名称: ACETATE ION, D-lyxose isomerase, GLYCEROL, ...
著者van Staalduinen, L.M, Jia, Z, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2009-11-10
公開日2010-07-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure-based annotation of a novel sugar isomerase from the pathogenic E. coli O157:H7.
J.Mol.Biol., 401, 2010
3ZTQ
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Hexagonal crystal form P61 of the Aquifex aeolicus nucleoside diphosphate kinase
分子名称: NUCLEOSIDE DIPHOSPHATE KINASE
著者Boissier, F, Georgescauld, F, Moynie, L, Dupuy, J.-W, Sarger, C, Podar, M, Lascu, I, Giraud, M.-F, Dautant, A.
登録日2011-07-12
公開日2012-02-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An Inter-Subunit Disulphide Bridge Stabilizes the Tetrameric Nucleoside Diphosphate Kinase of Aquifex Aeolicus
Proteins, 80, 2012
2AC4
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Crystal structure of the His183Cys mutant variant of Bacillus subtilis Ferrochelatase
分子名称: Ferrochelatase
著者Shipovskov, S, Karlberg, T, Fodje, M, Hansson, M.D, Ferreira, G.C, Hansson, M, Reimann, C.T, Al-Karadaghi, S.
登録日2005-07-18
公開日2005-09-20
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Metallation of the Transition-state Inhibitor N-methyl Mesoporphyrin by Ferrochelatase: Implications for the Catalytic Reaction Mechanism.
J.Mol.Biol., 352, 2005
1HO3
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CRYSTAL STRUCTURE ANALYSIS OF E. COLI L-ASPARAGINASE II (Y25F MUTANT)
分子名称: ASPARTIC ACID, L-ASPARAGINASE II
著者Jaskolski, M, Kozak, M, Lubkowski, P, Palm, J.G, Wlodawer, A.
登録日2000-12-08
公開日2001-03-07
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of two highly homologous bacterial L-asparaginases: a case of enantiomorphic space groups.
Acta Crystallogr.,Sect.D, 57, 2001
6ZMC
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Structure of the tRNA-Monooxygenase enzyme MiaE frozen under 2000 bar using the high pressure freezing method
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ARGON, CALCIUM ION, ...
著者Carpentier, P, Atta, M.
登録日2020-07-02
公開日2020-09-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural, biochemical and functional analyses of tRNA-monooxygenase enzyme MiaE from Pseudomonas putida provide insights into tRNA/MiaE interaction.
Nucleic Acids Res., 48, 2020
1HOM
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BU of 1hom by Molmil
DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
分子名称: ANTENNAPEDIA PROTEIN
著者Qian, Y.-Q, Billeter, M, Otting, G, Muller, M, Gehring, W.J, Wuthrich, K.
登録日1991-10-08
公開日1993-10-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Determination of the three-dimensional structure of the Antennapedia homeodomain from Drosophila in solution by 1H nuclear magnetic resonance spectroscopy.
J.Mol.Biol., 214, 1990
3ZMS
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BU of 3zms by Molmil
LSD1-CoREST in complex with INSM1 peptide
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, INSULINOMA-ASSOCIATED PROTEIN 1, LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A, ...
著者Tortorici, M, Borrello, M.T, Tardugno, M, Chiarelli, L.R, Pilotto, S, Ciossani, G, Vellore, N.A, Cowan, J, O'Connell, M, Mai, A, Baron, R, Ganesan, A, Mattevi, A.
登録日2013-02-12
公開日2013-06-12
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Protein Recognition by Small Peptide Reversible Inhibitors of the Chromatin-Modifying Lsd1/Corest Lysine Demethylase.
Acs Chem.Biol., 8, 2013
3ZUI
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OMCI in complex with palmitoleic acid
分子名称: COMPLEMENT INHIBITOR, PALMITOLEIC ACID
著者Roversi, P, Maillet, I, Togbe, D, Couillin, I, Quesniaux, V.F.J, Teixeira, M, Ahmat, N, Lissina, O, Boland, W, Ploss, K, Caesar, J.J.E, Leonhartsberger, S, Ryffel, B, Lea, S.M, Nunn, M.A.
登録日2011-07-19
公開日2012-08-01
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Bifunctional Lipocalin Ameliorates Murine Immune Complex-Induced Acute Lung Injury.
J.Biol.Chem., 288, 2013

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