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PDB: 49 件

1AOI
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COMPLEX BETWEEN NUCLEOSOME CORE PARTICLE (H3,H4,H2A,H2B) AND 146 BP LONG DNA FRAGMENT
分子名称: HISTONE H2A, HISTONE H2B, HISTONE H3, ...
著者Luger, K, Maeder, A.W, Richmond, R.K, Sargent, D.F, Richmond, T.J.
登録日1997-07-03
公開日1998-09-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the nucleosome core particle at 2.8 A resolution.
Nature, 389, 1997
2NQB
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Drosophila Nucleosome Structure
分子名称: Histone H2A, Histone H2B, Histone H3, ...
著者Luger, K, Chakravarthy, S.
登録日2006-10-30
公開日2007-09-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Comparative analysis of nucleosome structures from different species.
To be Published
3C1C
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BU of 3c1c by Molmil
The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure
分子名称: Histone 2, H2bf, Histone H2A type 1, ...
著者Lu, X, Simon, M, Chodaparambil, J, Hansen, J, Shokat, K, Luger, K.
登録日2008-01-22
公開日2008-10-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure.
Nat.Struct.Mol.Biol., 15, 2008
1M1A
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BU of 1m1a by Molmil
LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA
分子名称: 3-AMINO-(DIMETHYLPROPYLAMINE), 4-AMINO-(1-METHYLIMIDAZOLE)-2-CARBOXYLIC ACID, 4-AMINO-(1-METHYLPYRROLE)-2-CARBOXYLIC ACID, ...
著者Suto, R.K, Edayathumangalam, R.S, White, C.L, Melander, C, Gottesfeld, J.M, Dervan, P.B, Luger, K.
登録日2002-06-18
公開日2003-02-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal Structures of Nucleosome Core Particles in Complex with Minor Groove DNA-binding Ligands
J.MOL.BIOL., 326, 2003
7N8N
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Melbournevirus nucleosome like particle
分子名称: DNA (147-MER), Histone H2B-H2A doublet, Histone H4-H3 doublet
著者Liu, Y, Toner, C.M, Zhou, K, Bowerman, S, Luger, K.
登録日2021-06-15
公開日2021-08-04
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Virus-encoded histone doublets are essential and form nucleosome-like structures.
Cell, 184, 2021
5T5K
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BU of 5t5k by Molmil
Structure of histone-based chromatin in Archaea
分子名称: CACODYLATE ION, DNA (90-MER), DNA-binding protein HMf-2
著者Bhattacharyya, S, Mattiroli, F, Dyer, P.N, Sandman, K, Reeve, J.N, Luger, K.
登録日2016-08-31
公開日2017-08-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structure of histone-based chromatin in Archaea.
Science, 357, 2017
7U46
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Cryo-EM structure of CENP-A nucleosome (palindromic alpha satellite DNA) in complex with CENP-N
分子名称: Centromere protein N, DNA (147-MER), Histone H2A, ...
著者Zhou, K, Luger, K.
登録日2022-02-28
公開日2022-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献CENP-N promotes the compaction of centromeric chromatin.
Nat.Struct.Mol.Biol., 29, 2022
7U47
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CryoEM structure of CENP-N promoted nucleosome stacks with CENP-A and palindromic alpha satellite DNA sequence
分子名称: Centromere protein N, DNA (147-MER), Histone H2A, ...
著者Zhou, K, Luger, K.
登録日2022-02-28
公開日2022-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献CENP-N promotes the compaction of centromeric chromatin.
Nat.Struct.Mol.Biol., 29, 2022
7U4D
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CryoEM structure of CENP-N promoted nucleosome stacks with CENP-A and 601 DNA sequence
分子名称: Centromere protein N, DNA (147-MER), Histone H2A, ...
著者Zhou, K, Luger, K.
登録日2022-02-28
公開日2022-03-30
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (8.1 Å)
主引用文献CENP-N promotes the compaction of centromeric chromatin.
Nat.Struct.Mol.Biol., 29, 2022
6C0W
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Cryo-EM structure of human kinetochore protein CENP-N with the centromeric nucleosome containing CENP-A
分子名称: 147 mer DNA, Centromere protein N, Histone H2A, ...
著者Zhou, K, Pentakota, S, Vetter, I.R, Morgan, G.P, Petrovic, A, Musacchio, A, Luger, K.
登録日2018-01-02
公開日2018-01-17
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Decoding the centromeric nucleosome through CENP-N.
Elife, 6, 2017
8FW7
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Histone from Bdellovibrio bacteriovorus bound to dsDNA
分子名称: CBFD_NFYB_HMF domain-containing protein, DNA (5'-D(P*AP*T)-3'), DNA (5'-D(P*CP*AP*T)-3')
著者Laursen, S.P, Luger, K.
登録日2023-01-20
公開日2023-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus.
Nat Microbiol, 8, 2023
8FVX
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Histone from Bdellovibrio bacteriovorus
分子名称: CBFD_NFYB_HMF domain-containing protein
著者Laursen, S.P, Luger, K.
登録日2023-01-19
公開日2023-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Histones with an unconventional DNA-binding mode in vitro are major chromatin constituents in the bacterium Bdellovibrio bacteriovorus.
Nat Microbiol, 8, 2023
3NFQ
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BU of 3nfq by Molmil
Crystal structure of the conserved central domain of yeast Spn1/Iws1
分子名称: Transcription factor IWS1
著者Stargell, L.A, Luger, K.
登録日2010-06-10
公開日2010-10-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The Transcription Factor Spn1 Regulates Gene Expression via a Highly Conserved Novel Structural Motif.
J.Mol.Biol., 404, 2010
4Z66
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BU of 4z66 by Molmil
Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis
分子名称: DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
著者Dechassa, M.L, Luger, K, Chatterjee, N, North, J.A, Manohar, M, Prasad, R, Ottessen, J.J, Poirier, M.G, Bartholomew, B.
登録日2015-04-03
公開日2015-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF.
Mol.Cell.Biol., 35, 2015
6UPL
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Structure of FACT_subnucleosome complex 2
分子名称: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ...
著者Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K.
登録日2019-10-17
公開日2019-12-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献FACT caught in the act of manipulating the nucleosome.
Nature, 577, 2020
6UPK
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BU of 6upk by Molmil
Structure of FACT_subnucleosome complex 1
分子名称: DNA (79-mer), FACT complex subunit SPT16, FACT complex subunit SSRP1, ...
著者Zhou, K, Tan, Y.Z, Wei, H, Liu, Y, Carragher, B, Potter, C, Luger, K.
登録日2019-10-17
公開日2019-12-11
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献FACT caught in the act of manipulating the nucleosome.
Nature, 577, 2020
4XZQ
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BU of 4xzq by Molmil
Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis
分子名称: DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
著者Dechassa, M.L, Luger, K, Chatterjee, N, North, J.A, Manohar, M, Prasad, R, Ottessen, J.J, Poirier, M.G, Bartholomew, B.
登録日2015-02-04
公開日2015-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF.
Mol.Cell.Biol., 35, 2015
4YS3
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BU of 4ys3 by Molmil
Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis
分子名称: DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
著者Dechassa, M.L, Luger, K, Chatterjee, N, North, J.A, Manohar, M, Prasad, R, Ottessen, J.J, Poirier, M.G, Bartholomew, B.
登録日2015-03-16
公開日2015-10-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF.
Mol.Cell.Biol., 35, 2015
6USJ
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BU of 6usj by Molmil
Structure of two nucleosomes bridged by human PARP2
分子名称: Histone H2A, Histone H2B type 1-J, Histone H3.1, ...
著者Gaullier, G, Bowerman, S, Luger, K.
登録日2019-10-27
公開日2020-10-14
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (10.5 Å)
主引用文献Bridging of nucleosome-proximal DNA double-strand breaks by PARP2 enhances its interaction with HPF1.
Plos One, 15, 2020
1ZLA
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BU of 1zla by Molmil
X-ray Structure of a Kaposi's sarcoma herpesvirus LANA peptide bound to the nucleosomal core
分子名称: Histone H4, Palindromic 146bp Human alpha-Satellite DNA fragment, Xenopus laevis-like histone H2A, ...
著者Chodaparambil, J.V, Barbera, A.J, Kaye, K.M, Luger, K.
登録日2005-05-05
公開日2006-02-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA.
Science, 311, 2006
1YD9
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1.6A Crystal Structure of the Non-Histone Domain of the Histone Variant MacroH2A1.1.
分子名称: Core histone macro-H2A.1, GOLD ION
著者Chakravarthy, S, Swamy, G.Y.S.K, Caron, C, Perche, P.Y, Pehrson, J.R, Khochbin, S, Luger, K.
登録日2004-12-23
公開日2005-09-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural characterization of the histone variant macroH2A
Mol.Cell.Biol., 25, 2005
1S32
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Molecular Recognition of the Nucleosomal 'Supergroove'
分子名称: 2-(2-CARBAMOYLMETHOXY-ETHOXY)-ACETAMIDE, 3-AMINO-(DIMETHYLPROPYLAMINE), 4-AMINO-(1-METHYLIMIDAZOLE)-2-CARBOXYLIC ACID, ...
著者Edayathumangalam, R.S, Weyermann, P, Gottesfeld, J.M, Dervan, P.B, Luger, K.
登録日2004-01-12
公開日2004-05-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Molecular Recognition of the Nucleosomal 'Supergroove'
Proc.Natl.Acad.Sci.USA, 101, 2004
1U35
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Crystal structure of the nucleosome core particle containing the histone domain of macroH2A
分子名称: H2A histone family, Hist1h4i protein, Histone H3.1, ...
著者Chakravarthy, S, Gundimella, S.K, Caron, C, Perche, P.Y, Pehrson, J.R, Khochbin, S, Luger, K.
登録日2004-07-20
公開日2005-09-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural characterization of the histone variant macroH2A.
Mol.Cell.Biol., 25, 2005
1EYN
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Structure of mura liganded with the extrinsic fluorescence probe ANS
分子名称: 8-ANILINO-1-NAPHTHALENE SULFONATE, GLYCEROL, UDP-N-ACETYLGLUCOSAMINE 1-CARBOXYVINYLTRANSFERASE
著者Schonbrunn, E, Eschenburg, S, Luger, K, Kabsch, W, Amrhein, N.
登録日2000-05-07
公開日2000-06-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for the interaction of the fluorescence probe 8-anilino-1-naphthalene sulfonate (ANS) with the antibiotic target MurA.
Proc.Natl.Acad.Sci.USA, 97, 2000
1KX4
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X-Ray Structure of the Nucleosome Core Particle, NCP146b, at 2.6 A Resolution
分子名称: CHLORIDE ION, DNA (5'(ATCTCCAAATATCCCTTGCGGATCGTAGAAAAAGTGTGTCAAACTGCGCTATCAAAGGGAAACTTCAACTGAATTCAGTTGAAGTTTCCCTTTGATAGCGCAGTTTGACACACTTTTTCTACGATCCGCAAGGGATATTTGGAGAT)3'), MANGANESE (II) ION, ...
著者Davey, C.A, Sargent, D.F, Luger, K, Maeder, A.W, Richmond, T.J.
登録日2002-01-31
公開日2002-12-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Solvent Mediated Interactions in the Structure of the Nucleosome Core Particle at 1.9 A Resolution
J.Mol.Biol., 319, 2002

 

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