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PDB: 233 results

5CKD
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BU of 5ckd by Molmil
E. coli MazF E24A form III
Descriptor: Endoribonuclease MazF, SODIUM ION
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CO7
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BU of 5co7 by Molmil
E. coli MazF form III
Descriptor: Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-19
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.489 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
3DIE
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BU of 3die by Molmil
Domain swapping of Staphylococcus Aureus thioredoxin W28A mutant
Descriptor: CADMIUM ION, FE (III) ION, Thioredoxin
Authors:Martinez-Rodriguez, S, Loris, R, Messens, J.
Deposit date:2008-06-20
Release date:2009-03-24
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Coupling of domain swapping to kinetic stability in a thioredoxin mutant
J.Mol.Biol., 385, 2009
5CK9
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BU of 5ck9 by Molmil
E. coli MazF form I
Descriptor: Endoribonuclease MazF, PENTAETHYLENE GLYCOL
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CKH
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BU of 5ckh by Molmil
E. coli MazF E24A form IIb
Descriptor: Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-15
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.449 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CQX
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BU of 5cqx by Molmil
E. coli MazF mutant E24A in complex with MazE residues 68-82 form I
Descriptor: Antitoxin MazE, Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-22
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CW7
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BU of 5cw7 by Molmil
Crystal structure of the PaaA2-ParE2 antitoxin-toxin complex
Descriptor: GLYCEROL, PAAA2, Plasmid stabilization protein ParE
Authors:Sterckx, Y.G.-J, Loris, R.
Deposit date:2015-07-27
Release date:2016-06-01
Method:X-RAY DIFFRACTION (2.827 Å)
Cite:A unique hetero-hexadecameric architecture displayed by the Escherichia coli O157 PaaA2-ParE2 antitoxin-toxin complex.
J.Mol.Biol., 428, 2016
1LOY
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BU of 1loy by Molmil
X-ray structure of the H40A/E58A mutant of Ribonuclease T1 complexed with 3'-guanosine monophosphate
Descriptor: CALCIUM ION, GUANOSINE-3'-MONOPHOSPHATE, Guanyl-specific ribonuclease T1
Authors:Mignon, P, Steyaert, J, Loris, R, Geerlings, P, Loverix, S.
Deposit date:2002-05-07
Release date:2002-08-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A nucleophile activation dyad in ribonucleases. A combined X-ray crystallographic/ab initio quantum chemical study
J.Biol.Chem., 277, 2002
1LOW
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BU of 1low by Molmil
X-ray structure of the H40A mutant of Ribonuclease T1 complexed with 3'-guanosine monophosphate
Descriptor: CALCIUM ION, GUANOSINE-3'-MONOPHOSPHATE, Guanyl-specific ribonuclease T1
Authors:Mignon, P, Steyaert, J, Loris, R, Geerlings, P, Loverix, S.
Deposit date:2002-05-07
Release date:2002-08-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A nucleophile activation dyad in ribonucleases. A combined X-ray crystallographic/ab initio quantum chemical study
J.Biol.Chem., 277, 2002
3G7Z
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BU of 3g7z by Molmil
CcdB dimer in complex with two C-terminal CcdA domains
Descriptor: Cytotoxic protein ccdB, Protein ccdA
Authors:De Jonge, N, Loris, R, Garcia-Pino, A, Buts, L.
Deposit date:2009-02-11
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.351 Å)
Cite:Rejuvenation of CcdB-Poisoned Gyrase by an Intrinsically Disordered Protein Domain.
Mol.Cell, 35, 2009
5CR2
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BU of 5cr2 by Molmil
E. coli MazF in complex with single strand DNA substrate analog
Descriptor: Endoribonuclease MazF, ssDNA substrate analog
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-22
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
5CQY
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BU of 5cqy by Molmil
E. coli MazF mutant E24A in complex with MazE residues 68-82 form II
Descriptor: Antitoxin MazE, Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-07-22
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.481 Å)
Cite:Substrate Recognition and Activity Regulation of the Escherichia coli mRNA Endonuclease MazF.
J.Biol.Chem., 291, 2016
3DWT
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BU of 3dwt by Molmil
Structure of CabBCII-10 nanobody
Descriptor: GLYCEROL, cAbBCII-10
Authors:Vincke, C, Loris, R, Muyldermans, S, Conrath, K.
Deposit date:2008-07-23
Release date:2008-12-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:General strategy to humanize a camelid single-domain antibody and identification of a universal humanized nanobody scaffold.
J.Biol.Chem., 2008
1LU2
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BU of 1lu2 by Molmil
DOLICHOS BIFLORUS SEED LECTIN IN COMPLEX WITH THE BLOOD GROUP A TRISACCHARIDE
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, LECTIN, ...
Authors:Hamelryck, T.W, Loris, R, Bouckaert, J, Strecker, G, Imberty, A, Fernandez, E, Wyns, L, Etzler, M.E.
Deposit date:1998-07-30
Release date:1998-12-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Carbohydrate binding, quaternary structure and a novel hydrophobic binding site in two legume lectin oligomers from Dolichos biflorus.
J.Mol.Biol., 286, 1999
1LU1
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BU of 1lu1 by Molmil
THE STRUCTURE OF THE DOLICHOS BIFLORUS SEED LECTIN IN COMPLEX WITH THE FORSSMAN DISACCHARIDE
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, ADENINE, CALCIUM ION, ...
Authors:Hamelryck, T.W, Loris, R, Bouckaert, J, Strecker, G, Imberty, A, Fernandez, E, Wyns, L, Etzler, M.E.
Deposit date:1998-07-24
Release date:1998-12-09
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Carbohydrate binding, quaternary structure and a novel hydrophobic binding site in two legume lectin oligomers from Dolichos biflorus.
J.Mol.Biol., 286, 1999
1LOV
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BU of 1lov by Molmil
X-ray structure of the E58A mutant of Ribonuclease T1 complexed with 3'-guanosine monophosphate
Descriptor: CALCIUM ION, GUANOSINE-3'-MONOPHOSPHATE, Guanyl-specific ribonuclease T1
Authors:Mignon, P, Steyaert, J, Loris, R, Geerlings, P, Loverix, S.
Deposit date:2002-05-07
Release date:2002-08-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:A nucleophile activation dyad in ribonucleases. A combined X-ray crystallographic/ab initio quantum chemical study
J.Biol.Chem., 277, 2002
5DLO
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BU of 5dlo by Molmil
S. aureus MazF in complex with substrate analogue
Descriptor: CHLORIDE ION, DNA substrate analogue AUACAUA, Endoribonuclease MazF
Authors:Zorzini, V, Loris, R.
Deposit date:2015-09-07
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Substrate recognition, regulation mechanism and activity regulation of MazF mRNA interferase.
To Be Published
3DD7
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BU of 3dd7 by Molmil
Structure of DocH66Y in complex with the C-terminal domain of Phd
Descriptor: BROMIDE ION, Death on curing protein, Prevent host death protein
Authors:Garcia-Pino, A, Loris, R.
Deposit date:2008-06-05
Release date:2008-09-16
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Doc of Prophage P1 Is Inhibited by Its Antitoxin Partner Phd through Fold Complementation
J.Biol.Chem., 283, 2008
3DCQ
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BU of 3dcq by Molmil
LECB (PA-LII) in complex with the synthetic ligand 2G0
Descriptor: (2S)-1-[(2S)-6-amino-2-({[(2S,3S,4R,5S,6S)-3,4,5-trihydroxy-6-methyltetrahydro-2H-pyran-2-yl]acetyl}amino)hexanoyl]-N-[(1S)-1-carbamoyl-3-methylbutyl]pyrrolidine-2-carboxamide, CALCIUM ION, Fucose-binding lectin PA-IIL
Authors:Johansson, E.M, Crusz, S.A, Kolomiets, E, Buts, L, Kadam, R.U, Cacciarini, M, Bartels, K.M, Diggle, S.P, Camara, M, Williams, P, Loris, R, Nativi, C, Rosenau, F, Jaeger, K.E, Darbre, T, Reymond, J.L.
Deposit date:2008-06-04
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Inhibition and dispersion of Pseudomonas aeruginosa biofilms by glycopeptide dendrimers targeting the fucose-specific lectin LecB.
Chem.Biol., 15, 2008
1G8W
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BU of 1g8w by Molmil
IMPROVED STRUCTURE OF PHYTOHEMAGGLUTININ-L FROM THE KIDNEY BEAN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, LEUCOAGGLUTINATING PHYTOHEMAGGLUTININ, ...
Authors:Buts, L, Hamelryck, T.W, Dao-Thi, M, Loris, R, Wyns, L, Etzler, M.E.
Deposit date:2000-11-21
Release date:2000-12-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Weak protein-protein interactions in lectins: the crystal structure of a vegetative lectin from the legume Dolichos biflorus.
J.Mol.Biol., 309, 2001
3ENR
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BU of 3enr by Molmil
ZINC-CALCIUM CONCANAVALIN A AT PH 6.15
Descriptor: CALCIUM ION, Concanavalin-A, ZINC ION
Authors:Bouckaert, J, Loris, R, Wyns, L.
Deposit date:1999-02-11
Release date:2000-09-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Zinc/calcium- and cadmium/cadmium-substituted concanavalin A: interplay of metal binding, pH and molecular packing.
Acta Crystallogr.,Sect.D, 56, 2000
1ENQ
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BU of 1enq by Molmil
CO-CRYSTALS OF DEMETALLIZED CONCANAVALIN A WITH ZINC HAVING A ZINC ION BOUND IN THE S1 SITE
Descriptor: CONCANAVALIN A, ZINC ION
Authors:Bouckaert, J, Loris, R, Poortmans, F, Wyns, L.
Deposit date:1996-03-20
Release date:1996-08-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Sequential structural changes upon zinc and calcium binding to metal-free concanavalin A.
J.Biol.Chem., 271, 1996
1APN
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BU of 1apn by Molmil
THE CRYSTALLOGRAPHIC STRUCTURE OF METAL-FREE CONCANAVALIN A AT 2.5 ANGSTROMS RESOLUTION
Descriptor: CONCANAVALIN A
Authors:Bouckaert, J, Loris, R, Poortmans, F, Wyns, L.
Deposit date:1995-07-28
Release date:1996-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic structure of metal-free concanavalin A at 2.5 A resolution.
Proteins, 23, 1995
1BVI
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BU of 1bvi by Molmil
RIBONUCLEASE T1 (WILDTYPE) COMPLEXED WITH 2'GMP
Descriptor: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, PROTEIN (RIBONUCLEASE T1)
Authors:Langhorst, U, Loris, R, Denisov, V.P, Doumen, J, Roose, P, Maes, D, Halle, B, Steyaert, J.
Deposit date:1998-09-15
Release date:1998-09-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dissection of the structural and functional role of a conserved hydration site in RNase T1.
Protein Sci., 8, 1999
1DBN
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BU of 1dbn by Molmil
MAACKIA AMURENSIS LEUKOAGGLUTININ (LECTIN) WITH SIALYLLACTOSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MANGANESE (II) ION, ...
Authors:Imberty, A, Gautier, C, Lescar, J, Loris, R.
Deposit date:1999-11-03
Release date:2000-06-14
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:An unusual carbohydrate binding site revealed by the structures of two Maackia amurensis lectins complexed with sialic acid-containing oligosaccharides.
J.Biol.Chem., 275, 2000

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