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PDB: 456 results

3WYO
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BU of 3wyo by Molmil
Heterodimeric myoglobin formed by domain swapping
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lin, Y.W, Nagao, S, Zhang, M, Shomura, Y, Higuchi, Y, Hirota, S.
Deposit date:2014-09-04
Release date:2014-11-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational design of heterodimeric protein using domain swapping for myoglobin.
Angew.Chem.Int.Ed.Engl., 54, 2015
7XC9
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BU of 7xc9 by Molmil
X-ray crystal structure of sperm whale myoglobin F46C mutant
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lin, Y.W.
Deposit date:2022-03-23
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray crystal structure of sperm whale myoglobin F46C mutant
To Be Published
7XCQ
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BU of 7xcq by Molmil
X-ray crystal structure of sperm whale myoglobin H64D mutant
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lin, Y.W.
Deposit date:2022-03-25
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:X-ray crystal structure of sperm whale myoglobin H64D mutant
To Be Published
7XCF
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BU of 7xcf by Molmil
X-ray crystal structure of sperm whale myoglobin T67C mutant
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lin, Y.W.
Deposit date:2022-03-24
Release date:2023-03-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray crystal structure of sperm whale myoglobin T67C mutant
To Be Published
7VQG
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BU of 7vqg by Molmil
The X-ray structure of human neuroglobin A15C mutant
Descriptor: 1,4-DIETHYLENE DIOXIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Neuroglobin, ...
Authors:Lin, Y.W.
Deposit date:2021-10-19
Release date:2022-10-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The X-ray structure of human neuroglobin A15C mutant
To Be Published
7VW4
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BU of 7vw4 by Molmil
The X-ray structure of sperm whale F46C/L61C myoglobin double mutant
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lin, Y.W.
Deposit date:2021-11-09
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The X-ray structure of sperm whale F46C/L61C myoglobin double mutant
To Be Published
3U0J
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BU of 3u0j by Molmil
Crystal structure of ADP-ribosyltransferase HopU1 of Pseudomonas syringae pv. Tomato DC3000
Descriptor: Type III effector HopU1
Authors:Lin, Y, Yang, H, Wang, P, Xu, Y.
Deposit date:2011-09-28
Release date:2011-11-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure function analysis of an ADP-ribosyltransferase type III effector and its RNA-binding target in plant immunity
J.Biol.Chem., 286, 2011
7EHX
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X-ray crystal strcture of F46C/L49C sperm whale myoglobin with an intramolecular disulfide bond
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lin, Y.W.
Deposit date:2021-03-30
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal strcture of F46C/L49C sperm whale myoglobin with an intramolecular disulfide bond
To Be Published
1QXN
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Solution Structure of the 30 kDa Polysulfide-sulfur Transferase Homodimer from Wolinella Succinogenes
Descriptor: PENTASULFIDE-SULFUR, sulfide dehydrogenase
Authors:Lin, Y.J, Dancea, F, Loehr, F, Klimmek, O, Pfeiffer-Marek, S, Nilges, M, Wienk, H, Kroeger, A, Rueterjans, H.
Deposit date:2003-09-08
Release date:2004-02-24
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution Structure of the 30 kDa Polysulfide-Sulfur Transferase Homodimer from Wolinella succinogenes
Biochemistry, 43, 2004
2FHZ
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BU of 2fhz by Molmil
Molecular Basis of Inhibition of the Ribonuclease Activity in Colicin E5 by Its Cognate Immunity Protein
Descriptor: Colicin-E5, Colicin-E5 immunity protein
Authors:Lin, Y.L, Huang, R.H.
Deposit date:2005-12-27
Release date:2006-03-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Molecular basis of inhibition of the ribonuclease activity in colicin e5 by its cognate immunity protein
J.Mol.Biol., 358, 2006
2JNS
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BU of 2jns by Molmil
Solution structure of the Bromodomain-containing protein 4 ET domain
Descriptor: Bromodomain-containing protein 4
Authors:Lin, Y.J, Padmanabhan, B, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-01
Release date:2008-02-05
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of the Bromodomain-containing protein 4 ET domain
To be Published
6QII
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Xenon derivatization of the F420-reducing [NiFe] hydrogenase complex from Methanosarcina barkeri
Descriptor: (R,R)-2,3-BUTANEDIOL, Coenzyme F420 hydrogenase subunit alpha, Coenzyme F420 hydrogenase subunit beta, ...
Authors:Ilina, Y, Lorent, C, Katz, S, Jeoung, J.H, Shima, S, Horch, M, Zebger, I, Dobbek, H.
Deposit date:2019-01-19
Release date:2019-10-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases.
Angew.Chem.Int.Ed.Engl., 58, 2019
6QGT
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BU of 6qgt by Molmil
The carbon monoxide inhibition of F420-reducing [NiFe] hydrogenase complex from Methanosarcina barkeri
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (R,R)-2,3-BUTANEDIOL, Coenzyme F420 hydrogenase subunit beta, ...
Authors:Ilina, Y, Lorent, C, Katz, S, Jeoung, J.H, Shima, S, Horch, M, Zebger, I, Dobbek, H.
Deposit date:2019-01-12
Release date:2019-10-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.988 Å)
Cite:X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases.
Angew.Chem.Int.Ed.Engl., 58, 2019
6QGR
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BU of 6qgr by Molmil
The F420-reducing [NiFe] hydrogenase complex from Methanosarcina barkeri at the Nia-S state
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (R,R)-2,3-BUTANEDIOL, Coenzyme F420 hydrogenase subunit alpha, ...
Authors:Ilina, Y, Lorent, C, Katz, S, Jeoung, J.H, Shima, S, Horch, M, Zebger, I, Dobbek, H.
Deposit date:2019-01-12
Release date:2019-10-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.839 Å)
Cite:X-ray Crystallography and Vibrational Spectroscopy Reveal the Key Determinants of Biocatalytic Dihydrogen Cycling by [NiFe] Hydrogenases.
Angew.Chem.Int.Ed.Engl., 58, 2019
3IHG
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BU of 3ihg by Molmil
Crystal structure of a ternary complex of aklavinone-11 hydroxylase with FAD and aklavinone
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, RdmE, SULFATE ION, ...
Authors:Lindqvist, Y, Koskiniemi, H, Jansson, A, Sandalova, T, Schneider, G.
Deposit date:2009-07-30
Release date:2009-09-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis for substrate recognition and specificity in aklavinone-11-hydroxylase from rhodomycin biosynthesis.
J.Mol.Biol., 393, 2009
1TRK
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BU of 1trk by Molmil
REFINED STRUCTURE OF TRANSKETOLASE FROM SACCHAROMYCES CEREVISIAE AT 2.0 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, THIAMINE DIPHOSPHATE, TRANSKETOLASE
Authors:Lindqvist, Y, Schneider, G, Nikkola, M.
Deposit date:1993-11-22
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Refined structure of transketolase from Saccharomyces cerevisiae at 2.0 A resolution.
J.Mol.Biol., 238, 1994
1RPA
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BU of 1rpa by Molmil
THREE-DIMENSIONAL STRUCTURE OF RAT ACID PHOSPHATASE IN COMPLEX WITH L(+) TARTRATE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, D(-)-TARTARIC ACID, PROSTATIC ACID PHOSPHATASE, ...
Authors:Lindqvist, Y, Schneider, G.
Deposit date:1993-06-12
Release date:1994-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Three-dimensional structure of rat acid phosphatase in complex with L(+)-tartrate.
J.Biol.Chem., 268, 1993
1RPT
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BU of 1rpt by Molmil
CRYSTAL STRUCTURES OF RAT ACID PHOSPHATASE COMPLEXED WITH THE TRANSITIONS STATE ANALOGS VANADATE AND MOLYBDATE: IMPLICATIONS FOR THE REACTION MECHANISM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROSTATIC ACID PHOSPHATASE, VANADATE ION, ...
Authors:Lindqvist, Y, Schneider, G.
Deposit date:1993-11-29
Release date:1994-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of rat acid phosphatase complexed with the transition-state analogs vanadate and molybdate. Implications for the reaction mechanism.
Eur.J.Biochem., 221, 1994
1GOX
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BU of 1gox by Molmil
REFINED STRUCTURE OF SPINACH GLYCOLATE OXIDASE AT 2 ANGSTROMS RESOLUTION
Descriptor: (S)-2-HYDROXY-ACID OXIDASE, PEROXISOMAL, FLAVIN MONONUCLEOTIDE
Authors:Lindqvist, Y.
Deposit date:1989-06-14
Release date:1989-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Refined structure of spinach glycolate oxidase at 2 A resolution.
J.Mol.Biol., 209, 1989
1GYL
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BU of 1gyl by Molmil
INVOLVEMENT OF TYR24 AND TRP108 IN SUBSTRATE BINDING AND SUBSTRATE SPECIFICITY OF GLYCOLATE OXIDASE
Descriptor: FLAVIN MONONUCLEOTIDE, GLYCOLATE OXIDASE
Authors:Lindqvist, Y, Stenberg, K.
Deposit date:1995-01-30
Release date:1995-03-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Involvement of Tyr24 and Trp108 in substrate binding and substrate specificity of glycolate oxidase.
Eur.J.Biochem., 228, 1995
1QHW
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BU of 1qhw by Molmil
PURPLE ACID PHOSPHATASE FROM RAT BONE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FE (III) ION, PROTEIN (PURPLE ACID PHOSPHATASE), ...
Authors:Lindqvist, Y, Johansson, E, Kaija, H, Vihko, P, Schneider, G.
Deposit date:1999-03-26
Release date:1999-09-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of a mammalian purple acid phosphatase at 2.2 A resolution with a mu-(hydr)oxo bridged di-iron center.
J.Mol.Biol., 291, 1999
4KPR
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BU of 4kpr by Molmil
Tetrameric form of rat selenoprotein thioredoxin reductase 1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, SULFITE ION, ...
Authors:Lindqvist, Y, Sandalova, T, Xu, J, Arner, E.
Deposit date:2013-05-14
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Trp114 residue of thioredoxin reductase 1 is an electron relay sensor for oxidative stress
To be Published, 2013
1I2A
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BU of 1i2a by Molmil
CRYSTAL STRUCTURE OF L1 RIBOSOMAL PROTEIN FROM METHANOCOCCUS JANNASCHII WITH 1.85A RESOLUTION.
Descriptor: 50S RIBOSOMAL PROTEIN L1P, PENTANAL
Authors:Smolinskaya, Y, Nikonov, S.V.
Deposit date:2001-02-07
Release date:2003-12-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:

1AFR
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STEAROYL-ACYL CARRIER PROTEIN DESATURASE FROM CASTOR SEEDS
Descriptor: DELTA9 STEAROYL-ACYL CARRIER PROTEIN DESATURASE, FE (II) ION
Authors:Lindqvist, Y, Huang, W, Schneider, G.
Deposit date:1997-03-13
Release date:1997-05-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of delta9 stearoyl-acyl carrier protein desaturase from castor seed and its relationship to other di-iron proteins.
EMBO J., 15, 1996
5A3I
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Crystal Structure of a Complex formed between FLD194 Fab and Transmissible Mutant H5 Haemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ANTI-HAEMAGGLUTININ HA1 FAB HEAVY CHAIN, ...
Authors:Xiong, X, Corti, D, Liu, J, Pinna, D, Foglierini, M, Calder, L.J, Martin, S.R, Lin, Y.P, Walker, P.A, Collins, P.J, Monne, I, Suguitan Jr, A.L, Santos, C, Temperton, N.J, Subbarao, K, Lanzavecchia, A, Gamblin, S.J, Skehel, J.J.
Deposit date:2015-06-01
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structures of Complexes Formed by H5 Influenza Hemagglutinin with a Potent Broadly Neutralizing Human Monoclonal Antibody.
Proc.Natl.Acad.Sci.USA, 112, 2015

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