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PDB: 474 results

2GD5
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Structural basis for budding by the ESCRTIII factor CHMP3
Descriptor: Charged multivesicular body protein 3
Authors:Muziol, T.M, Pineda-Molina, E, Ravelli, R.B, Zamborlini, A, Usami, Y, Gottlinger, H, Weissenhorn, W.
Deposit date:2006-03-15
Release date:2006-06-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for Budding by the ESCRT-III Factor CHMP3.
Dev.Cell, 10, 2006
2B3B
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BU of 2b3b by Molmil
Thermus thermophilus Glucose/Galactose Binding Protein With Bound Glucose
Descriptor: alpha-D-glucopyranose, beta-D-glucopyranose, glucose-binding protein
Authors:Cuneo, M.J, Changela, A, Warren, J.J, Beese, L.S, Hellinga, H.W.
Deposit date:2005-09-20
Release date:2006-07-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The crystal structure of a thermophilic glucose binding protein reveals adaptations that interconvert mono and di-saccharide binding sites.
J.Mol.Biol., 362, 2006
2HBA
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BU of 2hba by Molmil
Crystal Structure of N-terminal Domain of Ribosomal Protein L9 (NTL9) K12M
Descriptor: 50S ribosomal protein L9, CHLORIDE ION, IMIDAZOLE, ...
Authors:Cho, J.-H, Kim, E.Y, Schindelin, H, Raleigh, D.P.
Deposit date:2006-06-14
Release date:2007-05-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Energetically significant networks of coupled interactions within an unfolded protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4GLF
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BU of 4glf by Molmil
Crystal structure of methylthioadenosine phosphorylase sourced from an antarctic soil metagenomic library
Descriptor: RsfP
Authors:Bujacz, A, Bujacz, G, Cieslinski, H, Bartasun, P.
Deposit date:2012-08-14
Release date:2013-02-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:A study on the interaction of rhodamine B with methylthioadenosine phosphorylase protein sourced from an antarctic soil metagenomic library.
Plos One, 8, 2013
2HVF
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BU of 2hvf by Molmil
Crystal Structure of N-terminal Domain of Ribosomal Protein L9 (NTL9), G34dA
Descriptor: 50S ribosomal protein L9, ACETIC ACID, CHLORIDE ION, ...
Authors:Anil, B, Kim, E.Y, Cho, J.H, Schindelin, H, Raleigh, D.P.
Deposit date:2006-07-28
Release date:2007-06-12
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Detecting and quantifying strain in protein folding
To be Published
2IBK
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BU of 2ibk by Molmil
Bypass of Major Benzopyrene-dG Adduct by Y-Family DNA Polymerase with Unique Structural Gap
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 1,2-ETHANEDIOL, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*AP*T)-3', ...
Authors:Bauer, J, Ling, H, Sayer, J.M, Xing, G, Yagi, H, Jerina, D.M.
Deposit date:2006-09-11
Release date:2007-09-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:A structural gap in Dpo4 supports mutagenic bypass of a major benzo[a]pyrene dG adduct in DNA through template misalignment.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2B3F
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BU of 2b3f by Molmil
Thermus thermophilus Glucose/Galactose Binding Protein Bound With Galactose
Descriptor: beta-D-galactopyranose, glucose-binding protein
Authors:Cuneo, M.J, Changela, A, Warren, J.J, Beese, L.S, Hellinga, H.W.
Deposit date:2005-09-20
Release date:2006-07-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:The crystal structure of a thermophilic glucose binding protein reveals adaptations that interconvert mono and di-saccharide binding sites.
J.Mol.Biol., 362, 2006
1JWA
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BU of 1jwa by Molmil
Structure of the ATP-bound MoeB-MoaD Protein Complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MOLYBDOPTERIN BIOSYNTHESIS MOEB PROTEIN, MOLYBDOPTERIN [MPT] CONVERTING FACTOR, ...
Authors:Lake, M.W, Wuebbens, M.M, Rajagopalan, K.V, Schindelin, H.
Deposit date:2001-09-03
Release date:2001-11-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanism of ubiquitin activation revealed by the structure of a bacterial MoeB-MoaD complex.
Nature, 414, 2001
4NNJ
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BU of 4nnj by Molmil
Crystal structure of Uba1 in complex with ubiquitin-AMP and thioesterified ubiquitin
Descriptor: ADENOSINE MONOPHOSPHATE, GLYCEROL, SULFATE ION, ...
Authors:Schaefer, A, Schindelin, H.
Deposit date:2013-11-18
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the ubiquitin-activating enzyme loaded with two ubiquitin molecules.
Acta Crystallogr.,Sect.D, 70, 2014
2HBB
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Crystal Structure of the N-terminal Domain of Ribosomal Protein L9 (NTL9)
Descriptor: 50S ribosomal protein L9, ZINC ION
Authors:Cho, J.-H, Kim, E.Y, Schindelin, H, Raleigh, D.P.
Deposit date:2006-06-14
Release date:2007-05-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Energetically significant networks of coupled interactions within an unfolded protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
2DFK
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BU of 2dfk by Molmil
Crystal structure of the CDC42-Collybistin II complex
Descriptor: GLYCEROL, SULFATE ION, cell division cycle 42 isoform 1, ...
Authors:Xiang, S, Kim, E.Y, Connelly, J.J, Nassar, N, Kirsch, J, Winking, J, Schwarz, G, Schindelin, H.
Deposit date:2006-03-02
Release date:2006-05-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The Crystal Structure of Cdc42 in Complex with Collybistin II, a Gephyrin-interacting Guanine Nucleotide Exchange Factor.
J.Mol.Biol., 359, 2006
3TIW
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BU of 3tiw by Molmil
Crystal structure of p97N in complex with the C-terminus of gp78
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase AMFR, Transitional endoplasmic reticulum ATPase
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2011-08-22
Release date:2011-09-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:The Structural and Functional Basis of the p97/Valosin-containing Protein (VCP)-interacting Motif (VIM): MUTUALLY EXCLUSIVE BINDING OF COFACTORS TO THE N-TERMINAL DOMAIN OF p97.
J.Biol.Chem., 286, 2011
4F9Z
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BU of 4f9z by Molmil
Crystal Structure of human ERp27
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, ACETATE ION, ...
Authors:Kober, F.X, Koelmel, W, Kuper, J, Schindelin, H.
Deposit date:2012-05-21
Release date:2012-12-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Crystal Structure of the Protein-Disulfide Isomerase Family Member ERp27 Provides Insights into Its Substrate Binding Capabilities.
J.Biol.Chem., 288, 2013
2FB3
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BU of 2fb3 by Molmil
Structure of MoaA in complex with 5'-GTP
Descriptor: 5'-DEOXYADENOSINE, GUANOSINE-5'-TRIPHOSPHATE, IRON/SULFUR CLUSTER, ...
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2005-12-08
Release date:2006-05-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.349 Å)
Cite:Binding of 5'-GTP to the C-terminal FeS cluster of the radical S-adenosylmethionine enzyme MoaA provides insights into its mechanism
Proc.Natl.Acad.Sci.USA, 103, 2006
2FB2
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BU of 2fb2 by Molmil
Structure of the MoaA Arg17/266/268/Ala triple mutant
Descriptor: IRON/SULFUR CLUSTER, Molybdenum cofactor biosynthesis protein A, S-ADENOSYLMETHIONINE, ...
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2005-12-08
Release date:2006-05-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Binding of 5'-GTP to the C-terminal FeS cluster of the radical S-adenosylmethionine enzyme MoaA provides insights into its mechanism
Proc.Natl.Acad.Sci.USA, 103, 2006
2F4O
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BU of 2f4o by Molmil
The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
Descriptor: CHLORIDE ION, PHQ-VAL-ALA-ASP-CF0, XP-C repair complementing complex 58 kDa protein, ...
Authors:Zhao, G, Zhou, X, Wang, L, Kisker, C, Lennarz, W.J, Schindelin, H.
Deposit date:2005-11-23
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structure of the mouse peptide N-glycanase-HR23 complex suggests co-evolution of the endoplasmic reticulum-associated degradation and DNA repair pathways.
J.Biol.Chem., 281, 2006
3PR4
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BU of 3pr4 by Molmil
Dpo4 Y12A mutant incorporating dADP opposite template dT
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3'), ...
Authors:Kirouac, K.N, Suo, Z, Ling, H.
Deposit date:2010-11-29
Release date:2011-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural mechanism of ribonucleotide discrimination by a Y-family DNA polymerase.
J.Mol.Biol., 407, 2011
3PR5
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BU of 3pr5 by Molmil
Dpo4 Y12A mutant incorporating ADP opposite template dT
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3'), ...
Authors:Kirouac, K.N, Ling, H.
Deposit date:2010-11-29
Release date:2011-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural mechanism of ribonucleotide discrimination by a Y-family DNA polymerase.
J.Mol.Biol., 407, 2011
1ED0
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BU of 1ed0 by Molmil
NMR structural determination of viscotoxin A3 from Viscum album L.
Descriptor: VISCOTOXIN A3
Authors:Romagnoli, S, Ugolini, R, Fogolari, F, Schaller, G, Urech, K, Giannattasio, M, Ragona, L, Molinari, H.
Deposit date:2000-01-26
Release date:2000-02-04
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:NMR structural determination of viscotoxin A3 from Viscum album L.
Biochem.J., 350, 2000
1NVJ
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BU of 1nvj by Molmil
Deletion Mutant (Delta 141) of Molybdopterin Synthase
Descriptor: FORMIC ACID, GLYCEROL, Molybdopterin converting factor subunit 2, ...
Authors:Rudolph, M.J, Wuebbens, M.M, Turque, O, Rajagopalan, K.V, Schindelin, H.
Deposit date:2003-02-03
Release date:2003-05-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural Studies of Molybdopterin Synthase Provide Insights into its Catalytic Mechanism
J.Biol.Chem., 278, 2003
3R3M
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BU of 3r3m by Molmil
Crystal structure of the FAF1 UBX domain
Descriptor: FAS-associated factor 1, PHOSPHATE ION
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2011-03-16
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Hierarchical Binding of Cofactors to the AAA ATPase p97.
Structure, 19, 2011
2NQR
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MoeA D142N
Descriptor: GLYCEROL, Molybdopterin biosynthesis protein moeA
Authors:Nicolas, J, Xiang, S, Schindelin, H, Rajagopalan, K.V.
Deposit date:2006-10-31
Release date:2007-01-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutational Analysis of Escherichia coli MoeA: Two Functional Activities Map to the Active Site Cleft.
Biochemistry, 46, 2007
2NQN
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BU of 2nqn by Molmil
MoeA T100W
Descriptor: GLYCEROL, Molybdopterin biosynthesis protein moeA
Authors:Nicolas, J, Xiang, S, Schindelin, H, Rajagopalan, K.V.
Deposit date:2006-10-31
Release date:2007-01-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutational Analysis of Escherichia coli MoeA: Two Functional Activities Map to the Active Site Cleft.
Biochemistry, 46, 2007
2NQV
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BU of 2nqv by Molmil
MoeA D228A
Descriptor: GLYCEROL, Molybdopterin biosynthesis protein moeA
Authors:Nciolas, J, Xiang, S, Schindelin, H, Rajagopalan, K.V.
Deposit date:2006-10-31
Release date:2007-01-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Mutational Analysis of Escherichia coli MoeA: Two Functional Activities Map to the Active Site Cleft.
Biochemistry, 46, 2007
1NVI
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BU of 1nvi by Molmil
Orthorhombic Crystal Form of Molybdopterin Synthase
Descriptor: GLYCEROL, Molybdopterin converting factor subunit 1, Molybdopterin converting factor subunit 2, ...
Authors:Rudolph, M.J, Wuebbens, M.M, Turque, O, Rajagopalan, K.V, Schindelin, H.
Deposit date:2003-02-03
Release date:2003-05-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Studies of Molybdopterin Synthase Provide Insights into its Catalytic Mechanism
J.Biol.Chem., 278, 2003

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