Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 406 results

6I1E
DownloadVisualize
BU of 6i1e by Molmil
Crystal structure of Pseudomonas aeruginosa Penicillin-Binding Protein 3 in complex with amoxicillin
Descriptor: 2-{1-[2-AMINO-2-(4-HYDROXY-PHENYL)-ACETYLAMINO]-2-OXO-ETHYL}-5,5-DIMETHYL-THIAZOLIDINE-4-CARBOXYLIC ACID, Peptidoglycan D,D-transpeptidase FtsI
Authors:Bellini, D, Dowson, C.G.
Deposit date:2018-10-28
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
8QRY
DownloadVisualize
BU of 8qry by Molmil
Crystal structure of the yeast spindle body component Spc98
Descriptor: Spindle pole body component
Authors:Bellini, D, Yatskevich, S, Barford, D.
Deposit date:2023-10-09
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Crystal structure of the yeast spindle body component Spc98
To Be Published
6HZJ
DownloadVisualize
BU of 6hzj by Molmil
Apo structure of TP domain from clinical penicillin-resistant mutant Neisseria gonorrhoea strain 6140 Penicillin-Binding Protein 2 (PBP2)
Descriptor: Probable peptidoglycan D,D-transpeptidase PenA
Authors:Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
Deposit date:2018-10-23
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
8CR7
DownloadVisualize
BU of 8cr7 by Molmil
Crystal structure of recombinant LasB from Pseudomonas aeruginosa PA7
Descriptor: CALCIUM ION, Pro-elastase, ZINC ION
Authors:Kolling, D, Koehnke, J.
Deposit date:2023-03-07
Release date:2023-07-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Facile Production of the Pseudomonas aeruginosa Virulence Factor LasB in Escherichia coli for Structure-Based Drug Design.
Chembiochem, 24, 2023
8CR3
DownloadVisualize
BU of 8cr3 by Molmil
Crystal structure of recombinant LasB from Pseudomonas aeruginosa PAO1
Descriptor: CALCIUM ION, Pro-elastase, ZINC ION
Authors:Kolling, D, Koehnke, J.
Deposit date:2023-03-07
Release date:2023-07-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Facile Production of the Pseudomonas aeruginosa Virulence Factor LasB in Escherichia coli for Structure-Based Drug Design.
Chembiochem, 24, 2023
8CR4
DownloadVisualize
BU of 8cr4 by Molmil
Crystal structure of recombinant LasBArtif from Pseudomonas aeruginosa AZPAE14816
Descriptor: CALCIUM ION, Pro-elastase, ZINC ION
Authors:Kolling, D, Koehnke, J.
Deposit date:2023-03-07
Release date:2023-07-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.91 Å)
Cite:Facile Production of the Pseudomonas aeruginosa Virulence Factor LasB in Escherichia coli for Structure-Based Drug Design.
Chembiochem, 24, 2023
6R40
DownloadVisualize
BU of 6r40 by Molmil
Apo structure of R504C mutant of Pseudomonas aeruginosa Penicillin-Binding Protein 3 (PBP3)
Descriptor: Peptidoglycan D,D-transpeptidase FtsI
Authors:Bellini, D, Dowson, C.G.
Deposit date:2019-03-21
Release date:2020-02-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
6R3X
DownloadVisualize
BU of 6r3x by Molmil
Structure of Pseudomonas aeruginosa Penicillin-Binding Protein 3 (PBP3) in complex with piperacillin
Descriptor: Peptidoglycan D,D-transpeptidase FtsI, Piperacillin (Open Form)
Authors:Bellini, D, Dowson, C.G.
Deposit date:2019-03-21
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
6R42
DownloadVisualize
BU of 6r42 by Molmil
Structure of R504C mutant of Pseudomonas aeruginosa Penicillin-Binding Protein 3 (PBP3) in complex with piperacillin
Descriptor: Peptidoglycan D,D-transpeptidase FtsI, Piperacillin (Open Form)
Authors:Bellini, D, Dowson, C.G.
Deposit date:2019-03-21
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
1B6X
DownloadVisualize
BU of 1b6x by Molmil
3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE GUANINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS, 4 STRUCTURES
Descriptor: 5'-D(*CP*GP*TP*AP*CP*(EDC)P*CP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3'
Authors:Cullinan, D, Johnson, F, Grollman, A.P, Eisenberg, M, De Los Santos, C.
Deposit date:1999-01-19
Release date:1999-01-27
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Solution structure of a DNA duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyguanosine.
Biochemistry, 36, 1997
5FD5
DownloadVisualize
BU of 5fd5 by Molmil
manganese uptake regulator
Descriptor: 1,2-ETHANEDIOL, Ferric uptake regulation protein, SULFATE ION
Authors:Bellini, D, Lebedev, A, Keegan, R, Walsh, M.A.
Deposit date:2015-12-15
Release date:2016-12-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure of an apo metal-free manganese uptake regulator, mur
To Be Published
5FD6
DownloadVisualize
BU of 5fd6 by Molmil
zinc-bound manganese uptake regulator
Descriptor: Ferric uptake regulation protein, GLYCEROL, SULFATE ION, ...
Authors:Bellini, D, Hemmings, A.M, Walsh, M.A.
Deposit date:2015-12-15
Release date:2016-12-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:structure of a zinc-bound manganese uptake regulator, mur
To Be Published
4QE8
DownloadVisualize
BU of 4qe8 by Molmil
FXR with DM175 and NCoA-2 peptide
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, 4-({2-[(4-tert-butylbenzoyl)amino]benzoyl}amino)benzoic acid, ...
Authors:Kudlinzki, D, Merk, D, Linhard, V.L, Saxena, K, Sreeramulu, S, Nilsson, E, Dekker, N, Wissler, L, Bamberg, K, Schubert-Zsilavecz, M, Schwalbe, H.
Deposit date:2014-05-15
Release date:2015-08-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:FXR with DM175 and NCoA-2 peptide
To be Published
1BWO
DownloadVisualize
BU of 1bwo by Molmil
THE CRYSTAL STRUCTURE OF WHEAT NON-SPECIFIC TRANSFER PROTEIN COMPLEXED WITH TWO MOLECULES OF PHOSPHOLIPID AT 2.1 A RESOLUTION
Descriptor: NONSPECIFIC LIPID-TRANSFER PROTEIN, [1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE
Authors:Charvolin, D, Cohen-Addad, C, Pebay-Peyroula, E.
Deposit date:1998-09-25
Release date:1999-08-27
Last modified:2018-05-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of a wheat nonspecific lipid transfer protein (ns-LTP1) complexed with two molecules of phospholipid at 2.1 A resolution.
Eur.J.Biochem., 264, 1999
4J23
DownloadVisualize
BU of 4j23 by Molmil
Low resolution crystal structure of the FGFR2D2D3/FGF1/SR128545 complex
Descriptor: Fibroblast growth factor 1, Fibroblast growth factor receptor 2
Authors:Kudlinzki, D, Saxena, K, Sreeramulu, S, Schieborr, U, Dreyer, M, Schreuder, H, Schwalbe, H.
Deposit date:2013-02-04
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.882 Å)
Cite:Molecular mechanism of SSR128129E, an extracellularly acting, small-molecule, allosteric inhibitor of FGF receptor signaling.
Cancer Cell, 23, 2013
3I4U
DownloadVisualize
BU of 3i4u by Molmil
Crystal Structure Analysis of a helicase associated domain
Descriptor: ATP-dependent RNA helicase DHX8, BROMIDE ION, GLYCEROL
Authors:Kudlinzki, D, Ficner, R.
Deposit date:2009-07-02
Release date:2010-07-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of the C-terminal domain of the spliceosomal helicase Prp22
Biol.Chem., 393, 2012
1B5K
DownloadVisualize
BU of 1b5k by Molmil
3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE THYMIDINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS
Descriptor: DNA (5'-D(*CP*GP*TP*AP*CP*EDCP*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*TP*GP*TP*AP*CP*G)-3')
Authors:Cullinan, D, Korobka, A, Grollman, A.P, Patel, D.J, Eisenberg, M, De Santos, C.L.
Deposit date:1999-01-07
Release date:1999-01-13
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR solution structure of an oligodeoxynucleotide duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite thymidine: comparison with the duplex containing deoxyadenosine opposite the adduct.
Biochemistry, 35, 1996
1B60
DownloadVisualize
BU of 1b60 by Molmil
3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE CYTIDINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS
Descriptor: DNA (5'-D(*CP*GP*TP*AP*CP*(EDC)P*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*GP*TP*AP*CP*G)-3')
Authors:Cullinan, D, Johnson, F, De Los Santos, C.
Deposit date:1999-01-20
Release date:2000-02-18
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of an 11-mer duplex containing the 3, N(4)-ethenocytosine adduct opposite 2'-deoxycytidine: implications for the recognition of exocyclic lesions by DNA glycosylases.
J.Mol.Biol., 296, 2000
4ME4
DownloadVisualize
BU of 4me4 by Molmil
Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
Descriptor: FE (III) ION, GUANOSINE-5'-MONOPHOSPHATE, IMIDAZOLE, ...
Authors:Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
Deposit date:2013-08-24
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014
4MCW
DownloadVisualize
BU of 4mcw by Molmil
Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, IMIDAZOLE, ...
Authors:Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
Deposit date:2013-08-21
Release date:2014-02-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014
4GW9
DownloadVisualize
BU of 4gw9 by Molmil
Structure of a bacteriophytochrome and light-stimulated protomer swapping with a gene repressor
Descriptor: BILIVERDINE IX ALPHA, bacteriophytochrome
Authors:Bellini, D, Papiz, M.Z.
Deposit date:2012-09-01
Release date:2012-09-26
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of a bacteriophytochrome and light-stimulated protomer swapping with a gene repressor.
Structure, 20, 2012
4E04
DownloadVisualize
BU of 4e04 by Molmil
RpBphP2 chromophore-binding domain crystallized by homologue-directed mutagenesis.
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB1
Authors:Bellini, D, Papiz, M.Z.
Deposit date:2012-03-02
Release date:2012-07-25
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Dimerization properties of the RpBphP2 chromophore-binding domain crystallized by homologue-directed mutagenesis.
Acta Crystallogr.,Sect.D, 68, 2012
2NPS
DownloadVisualize
BU of 2nps by Molmil
Crystal Structure of the Early Endosomal SNARE Complex
Descriptor: Syntaxin 13, Syntaxin-6, Vesicle transport through interaction with t-SNAREs homolog 1A, ...
Authors:Zwilling, D, Cypionka, A, Pohl, W.H, Fasshauer, D, Walla, P.J, Wahl, M.C, Jahn, R.
Deposit date:2006-10-30
Release date:2006-12-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Early endosomal SNAREs form a structurally conserved SNARE complex and fuse liposomes with multiple topologies
Embo J., 26, 2007
2NVG
DownloadVisualize
BU of 2nvg by Molmil
Soluble domain of Rieske Iron Sulfur protein.
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, Ubiquinol-cytochrome c reductase iron-sulfur subunit
Authors:Kolling, D, Brunzelle, J, Lhee, S, Crofts, A.R, Nair, S.K.
Deposit date:2006-11-12
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Atomic resolution structures of rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters.
Structure, 15, 2007
2NUK
DownloadVisualize
BU of 2nuk by Molmil
Soluble Domain of the Rieske Iron-Sulfur Protein from Rhodobacter sphaeroides
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Ubiquinol-cytochrome c reductase iron-sulfur subunit
Authors:Kolling, D, Brunzelle, J, Lhee, S, Crofts, A.R, Nair, S.K.
Deposit date:2006-11-09
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Atomic resolution structures of rieske iron-sulfur protein: role of hydrogen bonds in tuning the redox potential of iron-sulfur clusters.
Structure, 15, 2007

224931

數據於2024-09-11公開中

PDB statisticsPDBj update infoContact PDBjnumon