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PDB: 409 件

6I1G
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Crystal structure of TP domain from Chlamydia trachomatis Penicillin-Binding Protein 3 in complex with piperacillin
分子名称: Penicillin-binding protein,Penicillin-binding protein, Piperacillin (Open Form)
著者Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
登録日2018-10-28
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of TP domain from Chlamydia trachomatis Penicillin-Binding Protein 3 in complex with piperacillin
To Be Published
6HZJ
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BU of 6hzj by Molmil
Apo structure of TP domain from clinical penicillin-resistant mutant Neisseria gonorrhoea strain 6140 Penicillin-Binding Protein 2 (PBP2)
分子名称: Probable peptidoglycan D,D-transpeptidase PenA
著者Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
登録日2018-10-23
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
6HZI
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BU of 6hzi by Molmil
Apo structure of TP domain from Burkholderia pseudomallei penicillin-binding protein 3
分子名称: Peptidoglycan D,D-transpeptidase FtsI
著者Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
登録日2018-10-23
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Apo structure of TP domain from Burkholderia pseudomallei penicillin-binding protein 3
To Be Published
6HZR
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BU of 6hzr by Molmil
Apo structure of Pseudomonas aeruginosa Penicillin-Binding Protein 3
分子名称: Peptidoglycan D,D-transpeptidase FtsI
著者Bellini, D, Dowson, C.G.
登録日2018-10-23
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
6HR4
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Apo form of penicillin-binding protein 3 from P. aeruginosa
分子名称: Peptidoglycan D,D-transpeptidase FtsI
著者Bellini, D, Dowson, C.G.
登録日2018-09-26
公開日2019-10-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Apo form of penicillin-binding protein 3 from P. aeruginosa
To Be Published
6HZH
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BU of 6hzh by Molmil
Apo structure of TP domain from Chlamydia trachomatis penicillin-binding protein 3
分子名称: Penicillin-binding protein
著者Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
登録日2018-10-23
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Apo structure of TP domain from Chlamydia trachomatis penicillin-binding protein 3
To Be Published
6I1I
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BU of 6i1i by Molmil
Crystal structure of TP domain from Escherichia coli penicillin-binding protein 3 in complex with penicillin
分子名称: Peptidoglycan D,D-transpeptidase FtsI,Peptidoglycan D,D-transpeptidase FtsI, Piperacillin (Open Form)
著者Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
登録日2018-10-28
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
6I1F
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BU of 6i1f by Molmil
Crystal structure of TP domain from Chlamydia trachomatis Penicillin-Binding Protein 3 in complex with amoxicillin
分子名称: 2-{1-[2-AMINO-2-(4-HYDROXY-PHENYL)-ACETYLAMINO]-2-OXO-ETHYL}-5,5-DIMETHYL-THIAZOLIDINE-4-CARBOXYLIC ACID, Penicillin-binding protein,Penicillin-binding protein
著者Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
登録日2018-10-28
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structure of TP domain from Chlamydia trachomatis Penicillin-Binding Protein 3 in complex with amoxicillin
To Be Published
6HR6
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Nitrocefin reacted with catalytic serine (Ser294) of penicillin-binding protein 3 from Pseudomonas aeruginosa
分子名称: Nitrocefin - open form, Peptidoglycan D,D-transpeptidase FtsI
著者Bellini, D, Dowson, C.G.
登録日2018-09-26
公開日2019-10-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Nitrocefin acylation of single catalytic serine of penicillin-binding protein 3 from P. aeruginosa
To Be Published
6HZO
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BU of 6hzo by Molmil
Apo structure of TP domain from Haemophilus influenzae Penicillin-Binding Protein 3
分子名称: FtsI
著者Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
登録日2018-10-23
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
6HZQ
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BU of 6hzq by Molmil
Apo structure of TP domain from Escherichia coli Penicillin-Binding Protein 3
分子名称: Peptidoglycan D,D-transpeptidase FtsI
著者Bellini, D, Koekemoer, L, Newman, H, Dowson, C.G.
登録日2018-10-23
公開日2019-11-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Novel and Improved Crystal Structures of H. influenzae, E. coli and P. aeruginosa Penicillin-Binding Protein 3 (PBP3) and N. gonorrhoeae PBP2: Toward a Better Understanding of beta-Lactam Target-Mediated Resistance.
J.Mol.Biol., 431, 2019
5FD5
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BU of 5fd5 by Molmil
manganese uptake regulator
分子名称: 1,2-ETHANEDIOL, Ferric uptake regulation protein, SULFATE ION
著者Bellini, D, Lebedev, A, Keegan, R, Walsh, M.A.
登録日2015-12-15
公開日2016-12-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structure of an apo metal-free manganese uptake regulator, mur
To Be Published
5FD6
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zinc-bound manganese uptake regulator
分子名称: Ferric uptake regulation protein, GLYCEROL, SULFATE ION, ...
著者Bellini, D, Hemmings, A.M, Walsh, M.A.
登録日2015-12-15
公開日2016-12-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献structure of a zinc-bound manganese uptake regulator, mur
To Be Published
9BT4
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BU of 9bt4 by Molmil
Pyruvate:Ferredoxin Oxidoreductase from Methanosarcina acetivorans
分子名称: IRON/SULFUR CLUSTER, MAGNESIUM ION, Pyruvate:Ferredoxin Oxidoreductase, ...
著者Catlin, D, Nair, S.J.
登録日2024-05-14
公開日2024-10-09
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural organization of pyruvate: ferredoxin oxidoreductase from the methanogenic archaeon Methanosarcina acetivorans.
Structure, 2024
1B60
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BU of 1b60 by Molmil
3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE CYTIDINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS
分子名称: DNA (5'-D(*CP*GP*TP*AP*CP*(EDC)P*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*CP*GP*TP*AP*CP*G)-3')
著者Cullinan, D, Johnson, F, De Los Santos, C.
登録日1999-01-20
公開日2000-02-18
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of an 11-mer duplex containing the 3, N(4)-ethenocytosine adduct opposite 2'-deoxycytidine: implications for the recognition of exocyclic lesions by DNA glycosylases.
J.Mol.Biol., 296, 2000
1B5K
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BU of 1b5k by Molmil
3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE THYMIDINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS
分子名称: DNA (5'-D(*CP*GP*TP*AP*CP*EDCP*CP*AP*TP*GP*C)-3'), DNA (5'-D(*GP*CP*AP*TP*GP*TP*GP*TP*AP*CP*G)-3')
著者Cullinan, D, Korobka, A, Grollman, A.P, Patel, D.J, Eisenberg, M, De Santos, C.L.
登録日1999-01-07
公開日1999-01-13
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR solution structure of an oligodeoxynucleotide duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite thymidine: comparison with the duplex containing deoxyadenosine opposite the adduct.
Biochemistry, 35, 1996
1B6X
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BU of 1b6x by Molmil
3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE GUANINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS, 4 STRUCTURES
分子名称: 5'-D(*CP*GP*TP*AP*CP*(EDC)P*CP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3'
著者Cullinan, D, Johnson, F, Grollman, A.P, Eisenberg, M, De Los Santos, C.
登録日1999-01-19
公開日1999-01-27
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献Solution structure of a DNA duplex containing the exocyclic lesion 3,N4-etheno-2'-deoxycytidine opposite 2'-deoxyguanosine.
Biochemistry, 36, 1997
3I4U
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BU of 3i4u by Molmil
Crystal Structure Analysis of a helicase associated domain
分子名称: ATP-dependent RNA helicase DHX8, BROMIDE ION, GLYCEROL
著者Kudlinzki, D, Ficner, R.
登録日2009-07-02
公開日2010-07-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural analysis of the C-terminal domain of the spliceosomal helicase Prp22
Biol.Chem., 393, 2012
7NR6
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BU of 7nr6 by Molmil
Structure of NUDT15 in complex with NSC56456
分子名称: 1,2-ETHANEDIOL, 2-azanyl-9-cyclohexyl-3~{H}-purine-6-thione, MAGNESIUM ION, ...
著者Rehling, D, Stenmark, P.
登録日2021-03-03
公開日2022-03-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Coupling cellular target engagement to drug-induced responses with CeTEAM
To Be Published
4QE8
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BU of 4qe8 by Molmil
FXR with DM175 and NCoA-2 peptide
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, 4-({2-[(4-tert-butylbenzoyl)amino]benzoyl}amino)benzoic acid, ...
著者Kudlinzki, D, Merk, D, Linhard, V.L, Saxena, K, Sreeramulu, S, Nilsson, E, Dekker, N, Wissler, L, Bamberg, K, Schubert-Zsilavecz, M, Schwalbe, H.
登録日2014-05-15
公開日2015-08-12
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献FXR with DM175 and NCoA-2 peptide
To be Published
4J23
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BU of 4j23 by Molmil
Low resolution crystal structure of the FGFR2D2D3/FGF1/SR128545 complex
分子名称: Fibroblast growth factor 1, Fibroblast growth factor receptor 2
著者Kudlinzki, D, Saxena, K, Sreeramulu, S, Schieborr, U, Dreyer, M, Schreuder, H, Schwalbe, H.
登録日2013-02-04
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.882 Å)
主引用文献Molecular mechanism of SSR128129E, an extracellularly acting, small-molecule, allosteric inhibitor of FGF receptor signaling.
Cancer Cell, 23, 2013
4GW9
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BU of 4gw9 by Molmil
Structure of a bacteriophytochrome and light-stimulated protomer swapping with a gene repressor
分子名称: BILIVERDINE IX ALPHA, bacteriophytochrome
著者Bellini, D, Papiz, M.Z.
登録日2012-09-01
公開日2012-09-26
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of a bacteriophytochrome and light-stimulated protomer swapping with a gene repressor.
Structure, 20, 2012
2NPS
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BU of 2nps by Molmil
Crystal Structure of the Early Endosomal SNARE Complex
分子名称: Syntaxin 13, Syntaxin-6, Vesicle transport through interaction with t-SNAREs homolog 1A, ...
著者Zwilling, D, Cypionka, A, Pohl, W.H, Fasshauer, D, Walla, P.J, Wahl, M.C, Jahn, R.
登録日2006-10-30
公開日2006-12-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Early endosomal SNAREs form a structurally conserved SNARE complex and fuse liposomes with multiple topologies
Embo J., 26, 2007
4MCW
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Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
分子名称: 1,2-ETHANEDIOL, FE (III) ION, IMIDAZOLE, ...
著者Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
登録日2013-08-21
公開日2014-02-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014
4ME4
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BU of 4me4 by Molmil
Crystal structure of a HD-GYP domain (a cyclic-di-GMP phosphodiesterase) containing a tri-nuclear metal centre
分子名称: FE (III) ION, GUANOSINE-5'-MONOPHOSPHATE, IMIDAZOLE, ...
著者Bellini, D, Walsh, M.A, Oxford Protein Production Facility (OPPF)
登録日2013-08-24
公開日2014-02-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of an HD-GYP domain cyclic-di-GMP phosphodiesterase reveals an enzyme with a novel trinuclear catalytic iron centre.
Mol.Microbiol., 91, 2014

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件を2024-10-09に公開中

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