Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 375 件

8BH6
DownloadVisualize
BU of 8bh6 by Molmil
Mature 30S ribosomal subunit from Staphylococcus aureus
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Garaeva, N, Fatkhullin, B, Jenner, L, Soufari, H, Yusupov, M, Usachev, K.
登録日2022-10-30
公開日2023-09-20
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Ribosome maturation factor P (RimP) from Staphylococcus aureus
Structure, 2023
8BH7
DownloadVisualize
BU of 8bh7 by Molmil
The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Garaeva, N, Fatkhullin, B, Jenner, L, Soufari, H, Yusupov, M, Usachev, K.
登録日2022-10-30
公開日2023-09-20
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (4.23 Å)
主引用文献Ribosome maturation factor P (RimP) from Staphylococcus aureus
Structure, 2023
4GXB
DownloadVisualize
BU of 4gxb by Molmil
Structure of the SNX17 atypical FERM domain bound to the NPxY motif of P-selectin
分子名称: GLYCEROL, P-selectin, Sorting nexin-17
著者Ghai, R, Bugarcic, A, Liu, H, Norwood, S.J, Li, S.S, Teasdale, R.D, Collins, B.M.
登録日2012-09-04
公開日2013-03-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for endosomal trafficking of diverse transmembrane cargos by PX-FERM proteins.
Proc.Natl.Acad.Sci.USA, 110, 2013
1QFG
DownloadVisualize
BU of 1qfg by Molmil
E. COLI FERRIC HYDROXAMATE RECEPTOR (FHUA)
分子名称: 3-HYDROXY-TETRADECANOIC ACID, DECYLAMINE-N,N-DIMETHYL-N-OXIDE, DIPHOSPHATE, ...
著者Ferguson, A.D, Welte, W, Hofmann, E, Lindner, B, Holst, O, Coulton, J.W, Diederichs, K.
登録日1999-04-10
公開日2000-07-26
最終更新日2022-12-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A conserved structural motif for lipopolysaccharide recognition by procaryotic and eucaryotic proteins.
Structure Fold.Des., 8, 2000
8QUA
DownloadVisualize
BU of 8qua by Molmil
GTP binding protein YsxC from Staphylococcus aureus
分子名称: ACETYL GROUP, GLYCEROL, Probable GTP-binding protein EngB
著者Biktimirov, A, Islamov, D, Lazarenko, V, Fatkhullin, B, Validov, S, Yusupov, M, Usachev, K.
登録日2023-10-15
公開日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of GTPase YsxC from Staphylococcus aureus.
Biochem.Biophys.Res.Commun., 699, 2024
4MN6
DownloadVisualize
BU of 4mn6 by Molmil
Crystal structure of truncated PAS domain from S. aureus YycG
分子名称: Sensor protein kinase WalK, ZINC ION
著者Shaikh, N, Hvorup, R, Winnen, B, Collins, B.M, King, G.F.
登録日2013-09-10
公開日2014-09-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of PAS domain of S. aureus YycG
To be Published
8TTA
DownloadVisualize
BU of 8tta by Molmil
Structure of retromer VPS29-VPS35 (483-796) complexed with Fam21A repeat 21 (1328-1341)
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Chen, K.-E, Guo, Q, Collins, B.M.
登録日2023-08-13
公開日2024-08-21
実験手法X-RAY DIFFRACTION (3.46 Å)
主引用文献Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TTU
DownloadVisualize
BU of 8ttu by Molmil
Structure of SNX27 FERM complexed with Fam21A repeat 19 (1261 - 1274)
分子名称: DI(HYDROXYETHYL)ETHER, Fam21A repeat 19 peptide, GLYCEROL, ...
著者Guo, Q, Chen, K.-E, Collins, B.M.
登録日2023-08-15
公開日2024-08-21
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TTV
DownloadVisualize
BU of 8ttv by Molmil
Structure of SNX27 FERM complexed with Fam21A repeat 20 (1289-1302)
分子名称: DI(HYDROXYETHYL)ETHER, Fam21A repeat 20 peptide, Sorting nexin-27
著者Guo, Q, Chen, K.-E, Collins, B.M.
登録日2023-08-15
公開日2024-08-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex.
Proc.Natl.Acad.Sci.USA, 121, 2024
6EE0
DownloadVisualize
BU of 6ee0 by Molmil
Crystal Structure of SNX23 PX domain
分子名称: Kinesin-like protein KIF16B
著者Chandra, M, Collins, B.M.
登録日2018-08-12
公開日2018-08-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.518 Å)
主引用文献Classification of the human phox homology (PX) domains based on their phosphoinositide binding specificities.
Nat Commun, 10, 2019
8TTC
DownloadVisualize
BU of 8ttc by Molmil
Structure of retromer VPS29-VPS35 (483-796) complexed with Fam21A repeat 20 (1289-1302)
分子名称: ACETATE ION, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Chen, K.-E, Guo, Q, Collins, B.M.
登録日2023-08-13
公開日2024-08-21
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TTT
DownloadVisualize
BU of 8ttt by Molmil
Structure of SNX27 FERM complexed with Fam21A repeat 15 (1124-1140)
分子名称: DI(HYDROXYETHYL)ETHER, Fam21A repeat 15 peptide, GLYCEROL, ...
著者Guo, Q, Chen, K.-E, Collins, B.M.
登録日2023-08-15
公開日2024-08-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex.
Proc.Natl.Acad.Sci.USA, 121, 2024
8TTD
DownloadVisualize
BU of 8ttd by Molmil
Structure of VPS29 complexed with Fam21A repeat 21 (1328-1341)
分子名称: FORMIC ACID, SER-ASN-ILE-PHE-ASP-ASP-PRO-LEU-ASN-ALA-PHE-GLY-GLY-GLN, Vacuolar protein sorting-associated protein 29
著者Chen, K.-E, Guo, Q, Collins, B.M.
登録日2023-08-13
公開日2024-08-21
実験手法X-RAY DIFFRACTION (2.011 Å)
主引用文献Structural basis for coupling of the WASH subunit FAM21 with the endosomal SNX27-Retromer complex.
Proc.Natl.Acad.Sci.USA, 121, 2024
3KEC
DownloadVisualize
BU of 3kec by Molmil
Crystal Structure of Human MMP-13 complexed with a phenyl-2H-tetrazole compound
分子名称: 4-{[({3-[2-(4-methoxybenzyl)-2H-tetrazol-5-yl]phenyl}carbonyl)amino]methyl}benzoic acid, ACETOHYDROXAMIC ACID, CALCIUM ION, ...
著者Shieh, H.-S, Pavlovsky, A.G, Collins, B, Schnute, M.E.
登録日2009-10-25
公開日2010-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery of (pyridin-4-yl)-2H-tetrazole as a novel scaffold to identify highly selective matrix metalloproteinase-13 inhibitors for the treatment of osteoarthritis.
Bioorg.Med.Chem.Lett., 20, 2010
3KEK
DownloadVisualize
BU of 3kek by Molmil
Crystal Structure of Human MMP-13 complexed with a (pyridin-4-yl)-2H-tetrazole compound
分子名称: CALCIUM ION, Collagenase 3, ZINC ION, ...
著者Shieh, H.-S, Collins, B, Schnute, M.E.
登録日2009-10-26
公開日2010-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Discovery of (pyridin-4-yl)-2H-tetrazole as a novel scaffold to identify highly selective matrix metalloproteinase-13 inhibitors for the treatment of osteoarthritis.
Bioorg.Med.Chem.Lett., 20, 2009
1OCU
DownloadVisualize
BU of 1ocu by Molmil
Crystal structure of the yeast PX-domain protein Grd19p (sorting nexin 3) complexed to phosphatidylinosytol-3-phosphate.
分子名称: 2-(BUTANOYLOXY)-1-{[(HYDROXY{[2,3,4,6-TETRAHYDROXY-5-(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL)OXY]METHYL}ETHYL BUTANOATE, SORTING NEXIN
著者Zhou, C.Z, Li de La Sierra-Gallay, I, Cheruel, S, Collinet, B, Minard, P, Blondeau, K, Henkes, G, Aufrere, R, Leulliot, N, Graille, M, Sorel, I, Savarin, P, de la Torre, F, Poupon, A, Janin, J, van Tilbeurgh, H.
登録日2003-02-10
公開日2003-12-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the yeast Phox homology (PX) domain protein Grd19p complexed to phosphatidylinositol-3-phosphate.
J. Biol. Chem., 278, 2003
3KEJ
DownloadVisualize
BU of 3kej by Molmil
Crystal Structure of Human MMP-13 complexed with a (pyridin-4-yl)-2H-tetrazole compound
分子名称: 4-[(5-{2-[(3-fluorobenzyl)carbamoyl]pyridin-4-yl}-2H-tetrazol-2-yl)methyl]benzoic acid, CALCIUM ION, Collagenase 3, ...
著者Shieh, H.-S, Collins, B, Schnute, M.E.
登録日2009-10-26
公開日2010-11-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of (pyridin-4-yl)-2H-tetrazole as a novel scaffold to identify highly selective matrix metalloproteinase-13 inhibitors for the treatment of osteoarthritis.
Bioorg.Med.Chem.Lett., 20, 2010
6BTY
DownloadVisualize
BU of 6bty by Molmil
Crystal structure of the PI3KC2alpha C2 domain in space group P41212
分子名称: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha
著者Chen, K.-E, Collins, B.M.
登録日2017-12-08
公開日2018-10-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.678 Å)
主引用文献Molecular Basis for Membrane Recruitment by the PX and C2 Domains of Class II Phosphoinositide 3-Kinase-C2 alpha.
Structure, 26, 2018
6RK3
DownloadVisualize
BU of 6rk3 by Molmil
Solution structure of the ribosome Elongation Factor P (EF-P) from Staphylococcus aureus
分子名称: Elongation factor P
著者Usachev, K, Fatkhullin, B, Gabdulkhakov, A, Khusainov, I, Golubev, A, Validov, S, Yusupova, G, Yusupov, M.
登録日2019-04-30
公開日2020-03-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR and crystallographic structural studies of the Elongation factor P from Staphylococcus aureus.
Eur.Biophys.J., 49, 2020
1C0R
DownloadVisualize
BU of 1c0r by Molmil
COMPLEX OF VANCOMYCIN WITH D-LACTIC ACID
分子名称: CHLORIDE ION, LACTIC ACID, VANCOMYCIN, ...
著者Loll, P.J, Kaplan, J, Selinsky, B, Axelsen, P.H.
登録日1999-07-20
公開日1999-07-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Vancomycin Binding to Low-Affinity Ligands: Delineating a Minimum Set of Interactions Necessary for High-Affinity Binding.
J.Med.Chem., 42, 1999
7JJC
DownloadVisualize
BU of 7jjc by Molmil
Crystal structure of neuropilin-1 b1 domain in complex with SARS-CoV-2 S1 C-end rule (CendR) peptide
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Neuropilin-1, ...
著者Chen, K.-E, Collins, B.M.
登録日2020-07-25
公開日2020-10-28
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Neuropilin-1 is a host factor for SARS-CoV-2 infection.
Science, 370, 2020
2WB6
DownloadVisualize
BU of 2wb6 by Molmil
Crystal structure of AFV1-102, a protein from the Acidianus Filamentous Virus 1
分子名称: AFV1-102, CHLORIDE ION
著者Keller, J, Leulliot, N, Collinet, B, Campanacci, V, Cambillau, C, Pranghisvilli, D, van Tilbeurgh, H.
登録日2009-02-22
公開日2009-03-03
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of Afv1-102, a Protein from the Acidianus Filamentous Virus 1.
Protein Sci., 18, 2009
1C0Q
DownloadVisualize
BU of 1c0q by Molmil
COMPLEX OF VANCOMYCIN WITH 2-ACETOXY-D-PROPANOIC ACID
分子名称: CHLORIDE ION, LACTIC ACID, VANCOMYCIN, ...
著者Loll, P.J, Kaplan, J, Selinsky, B, Axelsen, P.H.
登録日1999-07-20
公開日1999-07-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Vancomycin binding to low-affinity ligands: delineating a minimum set of interactions necessary for high-affinity binding.
J.Med.Chem., 42, 1999
2VWB
DownloadVisualize
BU of 2vwb by Molmil
Structure of the archaeal Kae1-Bud32 fusion protein MJ1130: a model for the eukaryotic EKC-KEOPS subcomplex involved in transcription and telomere homeostasis.
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, PUTATIVE O-SIALOGLYCOPROTEIN ENDOPEPTIDASE
著者Hecker, A, Lopreiato, R, Graille, M, Collinet, B, Forterre, P, Domenico, L, van Tilbeurgh, H.
登録日2008-06-20
公開日2008-08-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structure of the Archaeal Kae1/Bud32 Fusion Protein Mj1130: A Model for the Eukaryotic Ekc/Keops Subcomplex
Embo J., 27, 2008
1OCS
DownloadVisualize
BU of 1ocs by Molmil
Crystal structure of the yeast PX-doamin protein Grd19p (sorting nexin3) complexed to phosphatidylinosytol-3-phosphate.
分子名称: GLYCEROL, SORTING NEXIN GRD19
著者Zhou, C.Z, Li De La Sierra-Gallay, I, Cheruel, S, Collinet, B, Minard, P, Blondeau, K, Henkes, G, Aufrere, R, Leulliot, N, Graille, M, Sorel, I, Savarin, P, De La Torre, F, Poupon, A, Janin, J, Van Tilbeurgh, H.
登録日2003-02-10
公開日2003-12-12
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal Structure of the Yeast Phox Homology (Px) Protein Grd19P (Sorting Nexin 3) Complexed to Phosphatidylinositol-3-Phosphate
J.Biol.Chem., 278, 2003

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon