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PDB: 37 results

8HO2
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crystal structure of Norcoclaurine synthase from Chinese lotus (Nelumbo nucicera)
Descriptor: S-norcoclaurine synthase
Authors:Liao, L.J, Zhao, Y.C.
Deposit date:2022-12-09
Release date:2023-12-06
Method:X-RAY DIFFRACTION (1.711 Å)
Cite:The crystal structure of Norcoclaurine synthase from Chinese lotus (Nelumbo nucicera) was investigated to determine its catalytic mechanism and enantioselectivity.
To Be Published
7T7W
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The peptide Lt-MAP4 is an analog derived from the Ltc-3a. The primary sequence of the parental peptide was used as template for rational design, using the amino acid residues for modification of charge and hydrophobicity.
Descriptor: Lt-MAP4 peptide
Authors:Freitas, C.D.P, Moraes, L.F.R.N, Migliolo, L, Liao, L.M.
Deposit date:2021-12-15
Release date:2023-01-25
Method:SOLUTION NMR
Cite:Two-dimensional NMR structural study of latarasin analogue Lt-MAP4 multifunctional synthetic peptide.
To Be Published
5J6T
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NMR structures of hylin-a1 analogs: Hylin-Ac
Descriptor: Hylin-a1
Authors:Crusca Jr, E, Matos, C.O, Liao, L.M, Oliveira, A.L.
Deposit date:2016-04-05
Release date:2017-04-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structures and molecular dynamics simulation of hylin-a1 peptide analogs interacting with micelles.
J. Pept. Sci., 23, 2017
5J6V
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NMR structures of hylin-a1 analogs: Hylin-D
Descriptor: Hylin-D
Authors:Crusca Jr, E, Matos, C.O, Liao, L.M, Oliveira, A.L.
Deposit date:2016-04-05
Release date:2017-04-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structures and molecular dynamics simulation of hylin-a1 peptide analogs interacting with micelles.
J. Pept. Sci., 23, 2017
5J6W
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NMR structures of hylin-a1 analogs: Hylin-K
Descriptor: Hylin-K
Authors:Crusca Jr, E, Matos, C.O, Liao, L.M, Oliveira, A.L.
Deposit date:2016-04-05
Release date:2017-04-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structures and molecular dynamics simulation of hylin-a1 peptide analogs interacting with micelles.
J. Pept. Sci., 23, 2017
2XNI
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Protein-ligand complex of a novel macrocyclic HCV NS3 protease inhibitor derived from amino cyclic boronates
Descriptor: (1-{[(10-tert-butyl-15,15-dimethyl-3,9,12-trioxo-6,7,9,10,11,12,14,15,16,17,18,19,23,23a-tetradecahydro-1H,5H-2,23:5,8-dimethano-4,13,2,8,11-benzodioxatriazacyclohenicosin-7(3H)-yl)carbonyl]amino}-3-hydroxypropyl)(trihydroxy)borate(1-), MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Zhou, Y, Li, Q, Plattner, J.J, Baker, S.J, Zhang, S, Kazmierski, W.M, Wright, L.L, Smith, G.K, Grimes, R.M, Crosby, R.M, Creech, K.L, Carballo, L.H, Slater, M.J, Jarvest, R.L, Thommes, P, Hubbard, J.A, Convery, M.A, Nassau, P.M, McDowell, W, Skarzynski, T.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, Pennicott, L.E, Zou, W, Wright, J.
Deposit date:2010-08-02
Release date:2011-08-17
Last modified:2012-09-26
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Novel Macrocyclic Hcv Ns3 Protease Inhibitors Derived from Alpha-Amino Cyclic Boronates.
Bioorg.Med.Chem.Lett., 20, 2010
2XCN
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Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: MAGNESIUM ION, N-[(CYCLOPENTYLOXY)CARBONYL]-3-METHYL-L-VALYL-(4R)-N-{(1R)-3-HYDROXY-1-[HYDROXY(OXIDO)BORANYL]PROPYL}-4-(ISOQUINOLIN-1-YLOXY)-L-PROLINAMIDE, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-23
Release date:2010-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
2XCF
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Crystal structure of HCV NS3 protease with a boronate inhibitor
Descriptor: CYCLOPENTYL N-[(2S)-1-[(2S,4R)-2-[[(4R)-8-HYDROXY-1,6,10-TRIOXA-5$L^{4}-BORASPIRO[4.5]DECAN-4-YL]CARBAMOYL]-4-ISOQUINOLIN-1-YLOXY-PYRROLIDIN-1-YL]-3,3-DIMETHYL-1-OXO-BUTAN-2-YL]CARBAMATE, MAGNESIUM ION, NS3 PROTEASE, ...
Authors:Li, X, Zhang, Y.-K, Liu, Y, Ding, C.Z, Li, Q, Zhou, Y, Plattner, J.J, Baker, S.J, Qian, X, Fan, D, Liao, L, Ni, Z.-J, White, G.V, Mordaunt, J.E, Lazarides, L.X, Slater, M.J, Jarvest, R.L, Thommes, P, Ellis, M, Edge, C.M, Hubbard, J.A, Nassau, P, McDowell, B, Skarzynski, T.J, Rowland, P, Somers, D.O, Kazmierski, W.M, Grimes, R.M, Wright, L.L, Smith, G.K, Zou, W, Wright, J, Pennicott, L.E.
Deposit date:2010-04-22
Release date:2010-06-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Synthesis and Evaluation of Novel Alpha-Amino Cyclic Boronates as Inhibitors of Hcv Ns3 Protease.
Bioorg.Med.Chem.Lett., 20, 2010
8ERU
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BU of 8eru by Molmil
Solution NMR structure of a computationally designed mastoparan-like peptide, mastoparan-R4
Descriptor: Mastoparan-R4 peptide
Authors:Freitas, C.D.P, Oshiro, K.G.N, Macedo, M.L.R, Cardoso, M.H, Franco, O.L, Liao, L.M.
Deposit date:2022-10-12
Release date:2023-10-18
Method:SOLUTION NMR
Cite:Solution NMR structure of a computacionally designed mastoparan-like peptide, mastoparan-R4
To Be Published
6Q08
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Synoeca peptide was isolated from the venom of wasp synoeca surinama.
Descriptor: Synoeca peptide
Authors:Alves, E.S, Rodrigues, L.V, Liao, L.M.
Deposit date:2019-08-01
Release date:2020-08-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR STRUCTURE OF THE ANTIMICROBIAL PEPTIDE ISOLATED FROM THE VENOM OF WASP Synoeca Surinama.
To Be Published
8EP5
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BU of 8ep5 by Molmil
Solution NMR structure of a computationally designed mastoparan-like peptide, mastoparan-R1
Descriptor: Mastoparan-R1 peptide
Authors:Freitas, C.D.P, Oshiro, K.G.N, Macedo, M.L.R, Cardoso, M.H, Franco, O.L, Liao, L.M.
Deposit date:2022-10-05
Release date:2023-10-18
Method:SOLUTION NMR
Cite:Solution NMR structure of a computationally designed mastoparan-like peptide, mastoparan-R1.
To Be Published
2N0V
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Backbone 1H, Chemical Shift Assignments for Cn-APM1
Descriptor: Antimicrobial peptide 1
Authors:Santana, M.J, Oliveira, A.L, Queiroz Jr, L.K, Mandal, S.M, Matos, C.O, Dias, R.O, Franco, O.L, Liao, L.M.
Deposit date:2015-03-17
Release date:2015-12-23
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural insights into Cn-AMP1, a short disulfide-free multifunctional peptide from green coconut water.
Febs Lett., 589, 2015
6IV7
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BU of 6iv7 by Molmil
The crystal structure of a SAM-dependent enzyme from aspergillus flavus
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, methyltransferase lepI
Authors:Zhou, Y.Z, Peng, T, Liao, L.J, Liu, X.K, Zhao, Y.C, Guo, Y, Zeng, Z.X.
Deposit date:2018-12-02
Release date:2019-02-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.937 Å)
Cite:The crystal structure of A SAM-Dependent enzyme from Aspergillus flavus
To Be Published
6DUL
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BU of 6dul by Molmil
Three-Dimensional Structures for mastoparano-L
Descriptor: mastoparano-L
Authors:Alves, E.S.F, Rodriguez, L.V, Liao, L.M.
Deposit date:2018-06-21
Release date:2019-06-26
Method:SOLUTION NMR
Cite:Three-Dimensional Structures for mastoparano-L
To Be Published
6DUU
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BU of 6duu by Molmil
Three-Dimensional Structures for mastoparano-MO
Descriptor: mastoparano-MO
Authors:Alves, E.S.F, Rodrigues, L.V, Liao, L.M.
Deposit date:2018-06-22
Release date:2019-06-26
Method:SOLUTION NMR
Cite:Three-Dimensional Structures for mastoparano-L
To Be Published
2N9R
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BU of 2n9r by Molmil
Novel antimicrobial peptide PaDBS1R1 designed from the ribosomal protein L39E from Pyrobaculum aerophilum using bioinformatics
Descriptor: Antimicrobial peptide PaDBS1R1
Authors:Irazazabal, L.S.F, Porto, W.F, Alves, E.S.F, Matos, C.O, Hancock, R.E.W, Haney, E, Ribeiro, S.M, Liao, L.M, Ladram, A.S.F, Franco, O.L.
Deposit date:2015-12-03
Release date:2016-12-07
Method:SOLUTION NMR
Cite:Novel antimicrobial peptide PaDBS1R1 designed from the ribosomal protein L39E from Pyrobaculum aerophilum using bioinformatics
To be Published
6D2H
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BU of 6d2h by Molmil
Three-Dimensional Structures of [Phe3]Cm-p1 analogs
Descriptor: SER-ARG-PHE-GLU-LEU-ILE-VAL-HIS-GLN-ARG-NH2
Authors:Alves, E.S.F, Liao, L.M.
Deposit date:2018-04-13
Release date:2019-04-17
Method:SOLUTION NMR
Cite:Three-Dimensional Structures of Cm-p1 and [Phe 3]Cm-p1 analogs
To be Published
6C41
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The clavanin peptide in the presence of TFE (2,2,2-trifluoroethanol), presented a amphipathic alpha-helices from Phe-2 to Val-22 residues
Descriptor: Clavanin-A
Authors:Alves, E.S.F, Liao, L.M.
Deposit date:2018-01-11
Release date:2018-02-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Studies of a Lipid-Binding Peptide from Tunicate Hemocytes with Anti-Biofilm Activity.
Sci Rep, 6, 2016
6CTG
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BU of 6ctg by Molmil
Three-Dimensional Structures of Cm-p1
Descriptor: Antifungal peptide
Authors:Alves, E.S.F, Liao, L.M.
Deposit date:2018-03-23
Release date:2019-03-27
Last modified:2020-01-08
Method:SOLUTION NMR
Cite:Three-Dimensional Structures of Cm-p1 and [Phe 3]Cm-p1 analogs
To be Published
6CFA
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BU of 6cfa by Molmil
peptide PaAMP1R3
Descriptor: peptide PaAMP1R3
Authors:Alves, E.S.F, Liao, L.M.
Deposit date:2018-02-14
Release date:2019-03-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Synthetic peptide PaAMP1R3
To be Published
8IWN
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BU of 8iwn by Molmil
ABCG25 EQ mutant in ATP-bound state
Descriptor: ABC transporter G family member 25, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Sun, L, Liu, X, Ying, W, Liao, L, Wei, H.
Deposit date:2023-03-30
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:ABCG25 EQ mutant in ATP-bound state
To Be Published
8IWJ
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ABCG25 Wild Type in Apo-state
Descriptor: ABC transporter G family member 25
Authors:Sun, L, Liu, X, Ying, W, Liao, L, Wei, H.
Deposit date:2023-03-30
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:ABCG25 Wild Type in Apo-state
To Be Published
8IWK
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ABCG25 Wild Type purified with DDM plus CHS in ABA-bound state
Descriptor: (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ABC transporter G family member 25
Authors:Sun, L, Liu, X, Ying, W, Liao, L, Wei, H.
Deposit date:2023-03-30
Release date:2024-04-10
Method:ELECTRON MICROSCOPY (3 Å)
Cite:ABCG25 Wild Type purified with DDM plus CHS in ABA-bound state
To Be Published
6KHO
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BU of 6kho by Molmil
Crystal structure of Oryza sativa TDC with PLP
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, Y.Z, Liao, L.J, Liu, X.K, Guo, Y, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-07-16
Release date:2020-07-15
Method:X-RAY DIFFRACTION (1.972 Å)
Cite:Crystal structure ofOryza sativaTDC reveals the substrate specificity for TDC-mediated melatonin biosynthesis.
J Adv Res, 24, 2020
6KHN
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Crystal structure of Oryza sativa TDC with PLP and SEROTONIN
Descriptor: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, Y.Z, Liao, L.J, Liu, X.K, Guo, Y, Zhao, Y.C, Zeng, Z.X.
Deposit date:2019-07-16
Release date:2020-07-15
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:Crystal structure ofOryza sativaTDC reveals the substrate specificity for TDC-mediated melatonin biosynthesis.
J Adv Res, 24, 2020

 

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