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PDB: 400 件

4V4K
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Bacteriophage P22 Portal Protein bound to middle Tail Factor GP4. This file contain the second biological assembly
分子名称: PACKAGED DNA STABILIZATION PROTEIN GP4, PORTAL PROTEIN
著者Olia, A.S, Cingolani, G.
登録日2010-04-19
公開日2014-07-09
最終更新日2021-10-06
実験手法X-RAY DIFFRACTION (3.251 Å)
主引用文献Three-dimensional structure of a viral genome-delivery portal vertex.
Nat.Struct.Mol.Biol., 18, 2011
6QCM
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BU of 6qcm by Molmil
Cryo em structure of the Listeria stressosome
分子名称: RsbR protein, RsbR protein,RsbR protein, RsbS protein
著者Williams, A.H, Redzej, A, Waksman, G, Cossart, P.
登録日2018-12-28
公開日2019-08-21
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.21 Å)
主引用文献The cryo-electron microscopy supramolecular structure of the bacterial stressosome unveils its mechanism of activation.
Nat Commun, 10, 2019
7OY0
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Structure of human Spermine Oxidase in complex with a highly selective allosteric inhibitor
分子名称: 4-[(4-imidazo[1,2-a]pyridin-3-yl-1,3-thiazol-2-yl)amino]phenol, CHLORIDE ION, FAD-MDL72527 adduct, ...
著者Impagliazzo, A, Thomsen, M, Johannsson, S, Krapp, S.
登録日2021-06-23
公開日2022-07-13
最終更新日2022-08-17
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structure of human spermine oxidase in complex with a highly selective allosteric inhibitor.
Commun Biol, 5, 2022
7P2P
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Human Signal Peptidase Complex Paralog A (SPC-A)
分子名称: Signal peptidase complex catalytic subunit SEC11A, Signal peptidase complex subunit 1, Signal peptidase complex subunit 2, ...
著者Liaci, A.M, Foerster, F.
登録日2021-07-06
公開日2021-10-06
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structure of the human signal peptidase complex reveals the determinants for signal peptide cleavage.
Mol.Cell, 81, 2021
7P2Q
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Human Signal Peptidase Complex Paralog C (SPC-C)
分子名称: Signal peptidase complex catalytic subunit SEC11C, Signal peptidase complex subunit 1, Signal peptidase complex subunit 2, ...
著者Liaci, A.M, Foerster, F.
登録日2021-07-06
公開日2021-10-06
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structure of the human signal peptidase complex reveals the determinants for signal peptide cleavage.
Mol.Cell, 81, 2021
7OXL
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BU of 7oxl by Molmil
Crystal structure of human Spermine Oxidase
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, FAD-MDL72527 adduct, ...
著者Impagliazzo, A, Johannsson, S, Thomsen, M, Krapp, S.
登録日2021-06-22
公開日2022-07-13
最終更新日2022-08-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of human spermine oxidase in complex with a highly selective allosteric inhibitor.
Commun Biol, 5, 2022
8F7T
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Glycan-Base ConC Env Trimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 Env gp120, ...
著者Olia, A.S, Kwong, P.D.
登録日2022-11-20
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Soluble prefusion-closed HIV-envelope trimers with glycan-covered bases.
Iscience, 26, 2023
8F7Z
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VRC34.01_mm28 bound to fusion peptide
分子名称: HIV-1 Env Fusion Peptide, VRC34_m228 Light Chain, VRC34_mm28 Heavy Chain
著者Olia, A.S, Kwong, P.D.
登録日2022-11-21
公開日2023-11-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Antibody-directed evolution reveals a mechanism for enhanced neutralization at the HIV-1 fusion peptide site.
Nat Commun, 14, 2023
8TDX
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BU of 8tdx by Molmil
TRNM-b.01 in complex with HIV Env fusion peptide
分子名称: Env Fusion Peptide, TRNM-b.01 Fab Heavy Chain, TRNM-b.01 Fab Light Chain
著者Olia, A.S, Kwong, P.D.
登録日2023-07-05
公開日2024-07-10
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Broad and potent HIV-1 neutralization in fusion peptide-primed SHIV-boosted macaques
To Be Published
5MPQ
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BU of 5mpq by Molmil
Bulgecin A: The key to a broad-spectrum inhibitor that targets lytic transglycosylases
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 4-O-(4-O-SULFONYL-N-ACETYLGLUCOSAMININYL)-5-METHYLHYDROXY-L-PROLINE-TAURINE, MAGNESIUM ION, ...
著者Williams, A.H.
登録日2016-12-17
公開日2017-03-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Bulgecin A: The Key to a Broad-Spectrum Inhibitor That Targets Lytic Transglycosylases.
Antibiotics, 6, 2017
8VUZ
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L5A7 Fab bound to 28H6E11 anti-idiotype Fab
分子名称: 28H6E11 Fab Heavy Chain, 28H6E11 Fab Light Chain, L5A7 Fab Heavy Chain, ...
著者Olia, A.S, Morano, N.C, Kwong, P.D.
登録日2024-01-30
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.95 Å)
主引用文献Anti-idiotype isolation of a broad and potent influenza A virus-neutralizing human antibody.
Front Immunol, 15, 2024
8VUE
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BU of 8vue by Molmil
L5A7 Fab bound to Indonesia2005 Hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1 chain, Hemagglutinin HA2 chain, ...
著者Olia, A.S, Gorman, J, Kwong, P.D.
登録日2024-01-29
公開日2024-05-22
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3.59 Å)
主引用文献Anti-idiotype isolation of a broad and potent influenza A virus-neutralizing human antibody.
Front Immunol, 15, 2024
8U6X
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BU of 8u6x by Molmil
ATP-dependent DNA ligase Lig E from Neisseria gonorrhoeae
分子名称: ADENOSINE MONOPHOSPHATE, DNA (5'-D(*AP*TP*TP*GP*CP*GP*AP*CP*CP*CP*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'), ...
著者Williamson, A, Pan, J.
登録日2023-09-14
公開日2024-01-31
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献A role for the ATP-dependent DNA ligase lig E of Neisseria gonorrhoeae in biofilm formation.
Bmc Microbiol., 24, 2024
6FPN
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BU of 6fpn by Molmil
Lytic transglycosylase in action
分子名称: Putative soluble lytic murein transglycosylase, SULFATE ION
著者Williams, A.H, Hoauz, A, Boneca, I.G.
登録日2018-02-11
公開日2018-03-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献A step-by-stepin crystalloguide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase.
J. Biol. Chem., 293, 2018
6G47
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BU of 6g47 by Molmil
Crystal Structure of Human Adenovirus 52 Short Fiber Knob in Complex with alpha-(2,8)-Trisialic Acid (DP3)
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Liaci, A.M, Stehle, T.
登録日2018-03-26
公開日2018-05-02
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.497 Å)
主引用文献Polysialic acid is a cellular receptor for human adenovirus 52.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3I3X
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BU of 3i3x by Molmil
Structural Basis for the Sugar Nucleotide and Acyl Chain Selectivity of Leptospira interrogans LpxA
分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, uridine-5'-diphosphate-3-N-(R-3-hydroxylauroyl)-N-acetyl-D-glucosamine
著者Williams, A.H.
登録日2009-07-01
公開日2009-09-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for the sugar nucleotide and acyl-chain selectivity of Leptospira interrogans LpxA.
Biochemistry, 48, 2009
3I3A
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BU of 3i3a by Molmil
Structural Basis for the Sugar Nucleotide and Acyl Chain Selectivity of Leptospira interrogans LpxA
分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, S-[2-({N-[(2R)-2-hydroxy-4-{[(S)-hydroxy(methoxy)phosphoryl]oxy}-3,3-dimethylbutanoyl]-beta-alanyl}amino)ethyl] (3R)-3-hydroxydodecanethioate
著者Williams, A.H.
登録日2009-06-30
公開日2009-09-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structural basis for the sugar nucleotide and acyl-chain selectivity of Leptospira interrogans LpxA.
Biochemistry, 48, 2009
7O3D
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BU of 7o3d by Molmil
Cooperation between the intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly
分子名称: Transcription elongation factor SPT6
著者Kasiliauskaite, A, Kubicek, K, Klumpler, T, Zanova, M, Zapletal, D, Novacek, J, Stefl, R.
登録日2021-04-01
公開日2022-04-13
最終更新日2022-06-15
実験手法ELECTRON MICROSCOPY (3.71 Å)
主引用文献Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly.
Nucleic Acids Res., 50, 2022
7O6B
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BU of 7o6b by Molmil
Cooperation between the intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly
分子名称: Transcription elongation factor SPT6
著者Kasiliauskaite, A, Kubicek, K, Klumpler, T, Zanova, M, Zapletal, D, Novacek, J, Stefl, R.
登録日2021-04-09
公開日2022-04-20
最終更新日2022-06-22
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly.
Nucleic Acids Res., 50, 2022
6GDR
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BU of 6gdr by Molmil
DNA binding with a minimal scaffold: Structure-function analysis of Lig E DNA ligases
分子名称: ADENOSINE MONOPHOSPHATE, DNA, DNA (5'-D(*TP*TP*CP*CP*GP*AP*TP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'), ...
著者Williamson, A, Grigic, M, Leiros, H.K.S.
登録日2018-04-24
公開日2018-07-25
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献DNA binding with a minimal scaffold: structure-function analysis of Lig E DNA ligases.
Nucleic Acids Res., 46, 2018
6HY2
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BU of 6hy2 by Molmil
Structure guided design of an antibacterial peptide that targets UDP-N-acetylglucosamine acyltransferase
分子名称: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, TRP-MET-LEU-ASP-PRO-ILE-ALA-GLY-LYS-TRP-SER-ARG
著者Williams, A.H, Dangkulwanich, M.
登録日2018-10-19
公開日2019-01-23
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure guided design of an antibacterial peptide that targets UDP-N-acetylglucosamine acyltransferase.
Sci Rep, 9, 2019
6H5F
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BU of 6h5f by Molmil
LtgA disordered Helix
分子名称: Putative soluble lytic murein transglycosylase
著者Williams, A.H.
登録日2018-07-24
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Defective lytic transglycosylase disrupts cell morphogenesis by hindering cell wall de-O-acetylation inNeisseria meningitidis.
Elife, 9, 2020
3BT7
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BU of 3bt7 by Molmil
Structure of E. coli 5-Methyluridine Methyltransferase TrmA in complex with 19 nucleotide T-arm analogue
分子名称: RNA (5'-D(P*GP*CP*UP*GP*UP*GP*(5MU)P*UP*CP*GP*AP*UP*CP*CP*AP*CP*AP*GP*C)-3'), tRNA (uracil-5-)-methyltransferase
著者Alian, A, Stroud, R.M, Finer-Moore, J.
登録日2007-12-27
公開日2008-04-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Structure of a TrmA-RNA complex: A consensus RNA fold contributes to substrate selectivity and catalysis in m5U methyltransferases.
Proc.Natl.Acad.Sci.Usa, 105, 2008
5O1J
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BU of 5o1j by Molmil
Lytic transglycosylase in action
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-1,6-anhydro-N-acetyl-beta-D-glucopyranosamine, Putative soluble lytic murein transglycosylase, ZINC ION
著者Williams, A.H, Rateau, L, Hoauz, A, Boneca, I.G.
登録日2017-05-18
公開日2018-03-14
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A step-by-stepin crystalloguide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase.
J. Biol. Chem., 293, 2018
5O2N
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Lytic transglycosylase in action
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, CITRATE ANION, ...
著者Williams, A.H, Hoauz, A, Boneca, I.G.
登録日2017-05-22
公開日2018-03-14
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.513 Å)
主引用文献A step-by-stepin crystalloguide to bond cleavage and 1,6-anhydro-sugar product synthesis by a peptidoglycan-degrading lytic transglycosylase.
J. Biol. Chem., 293, 2018

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