Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 521 件

6U7E
DownloadVisualize
BU of 6u7e by Molmil
HCoV-229E RBD Class III in complex with human APN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
著者Tomlinson, A.C.A, Li, Z, Rini, J.M.
登録日2019-09-02
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The human coronavirus HCoV-229E S-protein structure and receptor binding.
Elife, 8, 2019
8IL7
DownloadVisualize
BU of 8il7 by Molmil
Structure of human soluble Adenylyl Cyclase in complex with lactate
分子名称: (2S)-2-HYDROXYPROPANOIC ACID, Adenylate cyclase type 10, GLYCEROL
著者Li, Q.J, Li, Z.L, Gao, P.
登録日2023-03-02
公開日2023-07-26
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of human soluble Adenylyl Cyclase in complex with lactate
To Be Published
3J8G
DownloadVisualize
BU of 3j8g by Molmil
Electron cryo-microscopy structure of EngA bound with the 50S ribosomal subunit
分子名称: 23S rRNA, 50S ribosomal protein L1, 50S ribosomal protein L11, ...
著者Zhang, X, Yan, K, Zhang, Y, Li, N, Ma, C, Li, Z, Zhang, Y, Feng, B, Liu, J, Sun, Y, Xu, Y, Lei, J, Gao, N.
登録日2014-10-24
公開日2014-11-26
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structural insights into the function of a unique tandem GTPase EngA in bacterial ribosome assembly
Nucleic Acids Res., 2014
5Y9C
DownloadVisualize
BU of 5y9c by Molmil
Crystal structure of HPV58 pentamer in complex with the Fab fragment of antibody A12A3
分子名称: Major capsid protein L1, heavy chain of Fab fragment of antibody A12A3, light chain of Fab fragment of antibody A12A3
著者Li, S.W, Li, Z.H.
登録日2017-08-24
公開日2017-10-25
実験手法X-RAY DIFFRACTION (3.443 Å)
主引用文献Crystal Structures of Two Immune Complexes Identify Determinants for Viral Infectivity and Type-Specific Neutralization of Human Papillomavirus.
MBio, 8, 2017
6W62
DownloadVisualize
BU of 6w62 by Molmil
Cryo-EM structure of Cas12i-crRNA complex
分子名称: Cas12i, crRNA
著者Chang, L, Li, Z, Zhang, H.
登録日2020-03-16
公開日2020-09-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Mechanisms for target recognition and cleavage by the Cas12i RNA-guided endonuclease.
Nat.Struct.Mol.Biol., 27, 2020
6W5C
DownloadVisualize
BU of 6w5c by Molmil
Cryo-EM structure of Cas12i(E894A)-crRNA-dsDNA complex
分子名称: Cas12i, NTS, Substrate, ...
著者Chang, L, Li, Z, Zhang, H.
登録日2020-03-13
公開日2020-09-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Mechanisms for target recognition and cleavage by the Cas12i RNA-guided endonuclease.
Nat.Struct.Mol.Biol., 27, 2020
6W64
DownloadVisualize
BU of 6w64 by Molmil
Cryo-EM structure of Cas12i-crRNA-dsDNA complex in I1 state
分子名称: Cas12i, DNA (25-MER), crRNA
著者Chang, L, Li, Z, Zhang, H.
登録日2020-03-16
公開日2020-09-16
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Mechanisms for target recognition and cleavage by the Cas12i RNA-guided endonuclease.
Nat.Struct.Mol.Biol., 27, 2020
8HC4
DownloadVisualize
BU of 8hc4 by Molmil
SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32 Fab, ...
著者Liu, B, Gao, X, Chen, Q, Li, Z, Su, M, He, J, Xiong, X.
登録日2022-11-01
公開日2023-01-25
最終更新日2023-05-03
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants.
Nat Commun, 14, 2023
6XMF
DownloadVisualize
BU of 6xmf by Molmil
Cryo-EM structure of Cas12g binary complex
分子名称: CRISPR-Cas, RNA (116-MER), ZINC ION
著者Chang, L, Li, Z, Zhang, H.
登録日2020-06-30
公開日2021-01-13
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structure of the RNA-guided ribonuclease Cas12g.
Nat.Chem.Biol., 17, 2021
6XIW
DownloadVisualize
BU of 6xiw by Molmil
Cryo-EM structure of the sodium leak channel NALCN-FAM155A complex
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kschonsak, M, Chua, H.C, Noland, C.L, Weidling, C, Clairfeuille, T, Bahlke, O.O, Ameen, A.O, Li, Z.R, Arthur, C.P, Ciferri, C, Pless, S.A, Payandeh, J.
登録日2020-06-22
公開日2020-07-29
最終更新日2020-11-25
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure of the human sodium leak channel NALCN.
Nature, 587, 2020
6XMG
DownloadVisualize
BU of 6xmg by Molmil
Cryo-EM structure of Cas12g ternary complex
分子名称: CRISPR-Cas, RNA (130-MER), RNA (5'-R(P*UP*UP*AP*AP*UP*GP*CP*GP*GP*UP*AP*GP*UP*UP*UP*AP*UP*CP*AP*CP*AP*GP*UP*U)-3'), ...
著者Chang, L, Li, Z, Zhang, H.
登録日2020-06-30
公開日2021-01-13
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Cryo-EM structure of the RNA-guided ribonuclease Cas12g.
Nat.Chem.Biol., 17, 2021
8J84
DownloadVisualize
BU of 8j84 by Molmil
Short ago complexed with TIR-APAZ
分子名称: Piwi domain-containing protein, TIR domain-containing protein
著者Guo, L.J, Huang, P.P, Li, Z.X, Xiao, Y.B, Chen, M.R.
登録日2023-04-30
公開日2024-03-13
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Auto-inhibition and activation of a short Argonaute-associated TIR-APAZ defense system.
Nat.Chem.Biol., 20, 2024
6OMV
DownloadVisualize
BU of 6omv by Molmil
CryoEM structure of the LbCas12a-crRNA-AcrVA4-DNA complex
分子名称: AcrVA4, Cpf1, DNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*AP*GP*GP*A)-3'), ...
著者Chang, L, Li, Z, Zhang, H.
登録日2019-04-19
公開日2019-06-12
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural Basis for the Inhibition of CRISPR-Cas12a by Anti-CRISPR Proteins.
Cell Host Microbe, 25, 2019
7KCB
DownloadVisualize
BU of 7kcb by Molmil
Symmetry in Yeast Alcohol Dehydrogenase 1 -Closed Form with NAD+ and Trifluoroethanol
分子名称: ADH1 isoform 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TRIFLUOROETHANOL, ...
著者Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
登録日2020-10-05
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
7KCQ
DownloadVisualize
BU of 7kcq by Molmil
Symmetry in Yeast Alcohol Dehydrogenase 1 -Open Form of Apoenzyme
分子名称: Alcohol dehydrogenase, ZINC ION
著者Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
登録日2020-10-07
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
7KC2
DownloadVisualize
BU of 7kc2 by Molmil
Symmetry in Yeast Alcohol Dehydrogenase 1 -Closed Form with NADH
分子名称: Alcohol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
著者Subramanian, R, Chang, L, Li, Z, Plapp, B.V.
登録日2020-10-04
公開日2021-03-31
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Cryo-Electron Microscopy Structures of Yeast Alcohol Dehydrogenase.
Biochemistry, 60, 2021
8JJ3
DownloadVisualize
BU of 8jj3 by Molmil
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 2.5
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CHLORIDE ION, Proton-gated ion channel
著者Bharambe, N, Li, Z, Basak, S.
登録日2023-05-29
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (2.6476 Å)
主引用文献Cryo-EM structures of prokaryotic ligand-gated ion channel GLIC provide insights into gating in a lipid environment.
Nat Commun, 15, 2024
6PWC
DownloadVisualize
BU of 6pwc by Molmil
A complex structure of arrestin-2 bound to neurotensin receptor 1
分子名称: Beta-arrestin-1, Fab30 heavy chain, Fab30 light chain, ...
著者Yin, W, Li, Z, Jin, M, Yin, Y.-L, de Waal, P.W, Pal, K, Gao, X, He, Y, Gao, J, Wang, X, Zhang, Y, Zhou, H, Melcher, K, Jiang, Y, Cong, Y, Zhou, X.E, Yu, X, Xu, H.E.
登録日2019-07-22
公開日2019-12-04
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献A complex structure of arrestin-2 bound to a G protein-coupled receptor.
Cell Res., 29, 2019
3Q1J
DownloadVisualize
BU of 3q1j by Molmil
Crystal structure of tudor domain 1 of human PHD finger protein 20
分子名称: PHD finger protein 20, UNKNOWN ATOM OR ION
著者Tempel, W, Li, Z, Wernimont, A.K, Chao, X, Bian, C, Lam, R, Crombet, L, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2010-12-17
公開日2011-02-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures of the Tudor domains of human PHF20 reveal novel structural variations on the Royal Family of proteins.
Febs Lett., 586, 2012
6UVN
DownloadVisualize
BU of 6uvn by Molmil
CryoEM structure of VcCascasde-TniQ complex
分子名称: Cas6, Cas7, Cas8/5, ...
著者Chang, L, Li, Z, Zhang, H.
登録日2019-11-03
公開日2020-01-29
最終更新日2020-02-19
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Cryo-EM structure of a type I-F CRISPR RNA guided surveillance complex bound to transposition protein TniQ.
Cell Res., 30, 2020
5H4P
DownloadVisualize
BU of 5h4p by Molmil
Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1
分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Ma, C, Wu, S, Li, N, Chen, Y, Yan, K, Li, Z, Zheng, L, Lei, J, Woolford, J.L, Gao, N.
登録日2016-11-01
公開日2017-01-25
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structural snapshot of cytoplasmic pre-60S ribosomal particles bound by Nmd3, Lsg1, Tif6 and Reh1
Nat. Struct. Mol. Biol., 24, 2017
6V05
DownloadVisualize
BU of 6v05 by Molmil
Cryo-EM structure of a substrate-engaged Bam complex
分子名称: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamA,Outer membrane protein assembly factor BamA,Outer membrane protein assembly factor BamA,Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, ...
著者Tomasek, D, Rawson, S, Lee, J, Wzorek, J.S, Harrison, S.C, Li, Z, Kahne, D.
登録日2019-11-18
公開日2020-06-10
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure of a nascent membrane protein as it folds on the BAM complex.
Nature, 583, 2020
3R93
DownloadVisualize
BU of 3r93 by Molmil
Crystal structure of the chromo domain of M-phase phosphoprotein 8 bound to H3K9Me3 peptide
分子名称: H3K9Me3 peptide, M-phase phosphoprotein 8, UNKNOWN ATOM OR ION
著者Li, J, Li, Z, Ruan, J, Xu, C, Tong, Y, Pan, P.W, Tempel, W, Crombet, L, Min, J, Zang, J, Structural Genomics Consortium (SGC)
登録日2011-03-24
公開日2011-04-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.057 Å)
主引用文献Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.
Plos One, 6, 2011
6AGF
DownloadVisualize
BU of 6agf by Molmil
Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta1
分子名称: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pan, X.J, li, Z.Q, Zhou, Q, Shen, H.Z, Wu, K, Huang, X.S, Chen, J.F, Zhang, J.R, Zhu, X.C, Lei, J.L, Xiong, W, Gong, H.P, Xiao, B.L, Yan, N.
登録日2018-08-11
公開日2018-10-10
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the human voltage-gated sodium channel Nav1.4 in complex with beta 1.
Science, 362, 2018
3I3C
DownloadVisualize
BU of 3i3c by Molmil
Crystal Structural of CBX5 Chromo Shadow Domain
分子名称: Chromobox protein homolog 5, SODIUM ION
著者Amaya, M.F, Li, Z, Li, Y, Kozieradzki, I, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Bountra, C, Bochkarev, A, Min, J, Ouyang, H, Structural Genomics Consortium (SGC)
登録日2009-06-30
公開日2009-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Crystal Structural of CBX5 Chromo Shadow Domain
To be Published

220472

件を2024-05-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon