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PDB: 73 件
3WY7
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BU of 3wy7 by Molmil
Crystal structure of Mycobacterium smegmatis 7-Keto-8-aminopelargonic acid (KAPA) synthase BioF
分子名称: 8-amino-7-oxononanoate synthase
著者Fan, S.H, Li, D.F, Wang, D.C, Chen, G.J, Zhang, X.E, Bi, L.J.
登録日2014-08-20
公開日2014-12-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and function of Mycobacterium smegmatis 7-keto-8-aminopelargonic acid (KAPA) synthase
Int.J.Biochem.Cell Biol., 58C, 2014
3X3N
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BU of 3x3n by Molmil
Crystal structure of EccB1 of Mycobacterium tuberculosis in spacegroup P21
分子名称: CALCIUM ION, ESX-1 secretion system protein EccB1
著者Zhang, X.L, Li, D.F, Zhang, X.E, Bi, L.J, Wang, D.C.
登録日2015-01-24
公開日2015-12-09
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Core component EccB1 of the Mycobacterium tuberculosis type VII secretion system is a periplasmic ATPase.
Faseb J., 29, 2015
6ITS
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BU of 6its by Molmil
The citrate-bound trimer of chemoreceptor MCP2201 ligand binding domain
分子名称: CITRIC ACID, Methyl-accepting chemotaxis sensory transducer
著者Hong, Y, Li, D.F.
登録日2018-11-26
公開日2018-12-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献The ligand-binding domain of a chemoreceptor from Comamonas testosteroni has a previously unknown homotrimeric structure.
Mol.Microbiol., 112, 2019
5EBD
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BU of 5ebd by Molmil
Crystal structure of EccB1 of Mycobacterium tuberculosis in spacegroup P21 (state IV)
分子名称: CALCIUM ION, CHLORIDE ION, ESX-1 secretion system protein eccB1
著者Zhang, X.L, Qi, C, Xie, X.Q, Li, D.F, Bi, L.J.
登録日2015-10-19
公開日2016-02-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystallographic observation of the movement of the membrane-distal domain of the T7SS core component EccB1 from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.F, 72, 2016
5EBC
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BU of 5ebc by Molmil
Crystal structure of EccB1 of Mycobacterium tuberculosis in spacegroup P21 (state III)
分子名称: CALCIUM ION, ESX-1 secretion system protein eccB1
著者Zhang, X.L, Qi, C, Xie, X.Q, Li, D.F, Bi, L.J.
登録日2015-10-19
公開日2016-02-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallographic observation of the movement of the membrane-distal domain of the T7SS core component EccB1 from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.F, 72, 2016
5DV5
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BU of 5dv5 by Molmil
The fatty acid-responsive FadR repressor of Vibrio alginolyticus complex with Palmitoyl-CoA
分子名称: GntR family transcriptional regulator, Palmitoyl-CoA
著者Lin, Y, Li, D.F, Feng, Y.J.
登録日2015-09-21
公開日2016-10-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Snapshort of Vibrio FadR-ligand complex structure reveals a new mechanism for bacterial fatty acid sensing
To Be Published
4YIF
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BU of 4yif by Molmil
Crystal structure of Rv0880
分子名称: MarR family protein Rv0880
著者Gao, Y.R, Feng, N, Li, D.F, Bi, L.J.
登録日2015-03-02
公開日2015-06-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Structure of the MarR family protein Rv0880 from Mycobacterium tuberculosis.
Acta Crystallogr.,Sect.F, 71, 2015
4TQK
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BU of 4tqk by Molmil
Structural basis of specific recognition of non-reducing terminal N-acetylglucosamine by an Agrocybe aegerita lection
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Lectin 2
著者Hu, Y.L, Ren, X.M, Li, D.F, Jiang, S, Lan, X.Q, Sun, H, Wang, D.C.
登録日2014-06-11
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of Specific Recognition of Non-Reducing Terminal N-Acetylglucosamine by an Agrocybe aegerita Lectin.
Plos One, 10, 2015
4TQJ
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BU of 4tqj by Molmil
Structural basis of specific recognition of non-reducing terminal N-acetylglucosamine by an Agrocybe aegerita lection
分子名称: Lectin 2
著者Hu, Y.L, Ren, X.M, Li, D.F, Jiang, S, Lan, X.Q, Sun, H, Wang, D.C.
登録日2014-06-11
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis of Specific Recognition of Non-Reducing Terminal N-Acetylglucosamine by an Agrocybe aegerita Lectin.
Plos One, 10, 2015
4TQM
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BU of 4tqm by Molmil
Structural basis of specific recognition of non-reducing terminal N-acetylglucosamine by an Agrocybe aegerita lection
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lectin 2
著者Hu, Y.L, Ren, X.M, Li, D.F, Jiang, S, Lan, X.Q, Sun, H, Wang, D.C.
登録日2014-06-11
公開日2015-06-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis of Specific Recognition of Non-Reducing Terminal N-Acetylglucosamine by an Agrocybe aegerita Lectin.
Plos One, 10, 2015
2D2Z
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BU of 2d2z by Molmil
Crystal structure of Soluble Form Of CLIC4
分子名称: Chloride intracellular channel protein 4
著者Li, Y.F, Li, D.F, Wang, D.C.
登録日2005-09-21
公開日2006-05-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Trimeric structure of the wild soluble chloride intracellular ion channel CLIC4 observed in crystals
Biochem.Biophys.Res.Commun., 343, 2006
8JRC
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BU of 8jrc by Molmil
Crystal structure of the GAF domain of the transcriptional activator NifA
分子名称: Nif-specific regulatory protein
著者Zeng, Y, Guo, L, Li, D.F.
登録日2023-06-16
公開日2024-06-19
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the GAF domain of the transcriptional activator NifA
To Be Published
5HAA
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BU of 5haa by Molmil
Crystal structure of mpy-RNase J, an archaeal RNase J from Methanolobus psychrophilus R15
分子名称: Ribonuclease J, SULFATE ION, ZINC ION
著者Feng, N, Li, D.F.
登録日2015-12-30
公開日2017-01-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.904 Å)
主引用文献Molecular insights into catalysis and processive exonucleolytic mechanisms of prokaryotic RNase J revealing striking parallels with that of eukaryotic Xrn1
To Be Published
2ZGP
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BU of 2zgp by Molmil
Crystal structure of Agrocybe aegerita lectin AAL mutant I25G
分子名称: Anti-tumor lectin
著者Yang, N, Li, D.F, Wang, D.C.
登録日2008-01-23
公開日2009-01-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for the tumor cell apoptosis-inducing activity of an antitumor lectin from the edible mushroom Agrocybe aegerita
J.Mol.Biol., 387, 2009
2ZGL
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BU of 2zgl by Molmil
Crystal structure of recombinant Agrocybe aegerita (rAAL)
分子名称: Anti-tumor lectin
著者Yang, N, Li, D.F, Wang, D.C.
登録日2008-01-23
公開日2009-01-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the tumor cell apoptosis-inducing activity of an antitumor lectin from the edible mushroom Agrocybe aegerita
J.Mol.Biol., 387, 2009
2ZGN
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BU of 2zgn by Molmil
crystal structure of recombinant Agrocybe aegerita lectin, rAAL, complex with galactose
分子名称: Anti-tumor lectin, beta-D-galactopyranose
著者Yang, N, Li, D.F, Wang, D.C.
登録日2008-01-23
公開日2009-01-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for the tumor cell apoptosis-inducing activity of an antitumor lectin from the edible mushroom Agrocybe aegerita
J.Mol.Biol., 387, 2009
2ZGK
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BU of 2zgk by Molmil
Crystal structure of wildtype AAL
分子名称: Anti-tumor lectin
著者Yang, N, Li, D.F, Wang, D.C.
登録日2008-01-23
公開日2009-01-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the tumor cell apoptosis-inducing activity of an antitumor lectin from the edible mushroom Agrocybe aegerita
J.Mol.Biol., 387, 2009
2ZGR
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BU of 2zgr by Molmil
Crystal structure of AAL mutant L33A in C2 spacegroup
分子名称: Anti-tumor lectin
著者Yang, N, Li, D.F, Wang, D.C.
登録日2008-01-23
公開日2009-01-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for the tumor cell apoptosis-inducing activity of an antitumor lectin from the edible mushroom Agrocybe aegerita
J.Mol.Biol., 387, 2009
3VYN
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BU of 3vyn by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N55 truncation mutant (resideus 55-408)
分子名称: Probable conserved lipoprotein LPPS
著者Li, W.J, Li, D.F, Bi, L.J, Wang, D.C.
登録日2012-09-30
公開日2013-06-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis
Cell Res., 23, 2013
3VYP
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BU of 3vyp by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2-N140 adduct with meropenem
分子名称: (2S,3R,4S)-4-{[(3S,5R)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, GLYCEROL, Probable conserved lipoprotein LPPS
著者Li, W.J, Li, D.F, Bi, L.J, Wang, D.C.
登録日2012-09-30
公開日2013-06-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis
Cell Res., 23, 2013
3VYO
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BU of 3vyo by Molmil
Crystal structure of Mycobacterium tuberculosis L,D-transpeptidase LdtMt2 N140 truncation mutant (resideus 140-408)
分子名称: Probable conserved lipoprotein LPPS
著者Li, W.J, Li, D.F, Bi, L.J, Wang, D.C.
登録日2012-09-30
公開日2013-06-19
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis
Cell Res., 23, 2013
5YT1
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BU of 5yt1 by Molmil
Crystal structrure of near infrared fluoresecent protein mNeptune684
分子名称: near infrared fluoresecent protein mNeptune684
著者Zhang, X.E, Wang, D.B, Yuan, Y, Li, D.F.
登録日2017-11-16
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structrure of near infrared fluoresecent protein mNeptune684
to be published
5HSO
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BU of 5hso by Molmil
Crystal structure of MYCOBACTERIUM TUBERCULOSIS MARR FAMILY PROTEIN Rv2887 complex with DNA
分子名称: DNA (30-MER), the upstream sequence of Rv0560c, Uncharacterized HTH-type transcriptional regulator Rv2887
著者Gao, Y.R, Li, D.F, Wang, D.C, Bi, L.J.
登録日2016-01-26
公開日2017-02-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural analysis of the regulatory mechanism of MarR protein Rv2887 in M. tuberculosis
Sci Rep, 7, 2017
5HQP
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BU of 5hqp by Molmil
Crystal structure of the ERp44-peroxiredoxin 4 complex
分子名称: Endoplasmic reticulum resident protein 44, Peroxiredoxin-4
著者Yang, K, Li, D.F, Wang, X, Wang, C.C.
登録日2016-01-22
公開日2016-10-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of the ERp44-Peroxiredoxin 4 Complex Reveals the Molecular Mechanisms of Thiol-Mediated Protein Retention.
Structure, 24, 2016
7WRM
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BU of 7wrm by Molmil
The malate-bound dimer of chemoreceptor MCP2201 ligand binding domain
分子名称: (2S)-2-hydroxybutanedioic acid, Methyl-accepting chemotaxis sensory transducer
著者Hong, Y, Guo, L, Li, D.F.
登録日2022-01-27
公開日2023-01-04
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Attractant and repellent induce opposing changes in the four-helix bundle ligand-binding domain of a bacterial chemoreceptor.
Plos Biol., 21, 2023

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