Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 124 results

5MK3
DownloadVisualize
BU of 5mk3 by Molmil
Crystal structure of the His Domain Protein Tyrosine Phosphatase (HD-PTP/PTPN23) Bro 1 domain (CHMP4C peptide complex structure)
Descriptor: Charged multivesicular body protein 4c, Tyrosine-protein phosphatase non-receptor type 23
Authors:Levy, C.
Deposit date:2016-12-02
Release date:2017-08-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Specific Interaction of TGF beta Signaling Regulators SARA/Endofin with HD-PTP.
Structure, 25, 2017
5MK0
DownloadVisualize
BU of 5mk0 by Molmil
Crystal structure of the His Domain Protein Tyrosine Phosphatase (HD-PTP/PTPN23) Bro1 domain (Endofin peptide complex)
Descriptor: Tyrosine-protein phosphatase non-receptor type 23, Zinc finger FYVE domain-containing protein 16
Authors:Levy, C, Gahloth, D.
Deposit date:2016-12-02
Release date:2017-08-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.765 Å)
Cite:Structural Basis for Specific Interaction of TGF beta Signaling Regulators SARA/Endofin with HD-PTP.
Structure, 25, 2017
5LM1
DownloadVisualize
BU of 5lm1 by Molmil
Crystal Structure of HD-PTP phosphatase in complex with UBAP1
Descriptor: Tyrosine-protein phosphatase non-receptor type 23, UBAP-1
Authors:Levy, C.
Deposit date:2016-07-28
Release date:2016-11-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural Basis for Selective Interaction between the ESCRT Regulator HD-PTP and UBAP1.
Structure, 24, 2016
5MK1
DownloadVisualize
BU of 5mk1 by Molmil
Crystal structure of the His Domain Protein Tyrosine Phosphatase (HD-PTP/PTPN23) Bro1 domain (CHMP4A peptide complex structure)
Descriptor: Charged multivesicular body protein 4a, Tyrosine-protein phosphatase non-receptor type 23
Authors:Levy, C, Gahloth, D.
Deposit date:2016-12-02
Release date:2017-08-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Basis for Specific Interaction of TGF beta Signaling Regulators SARA/Endofin with HD-PTP.
Structure, 25, 2017
5MK2
DownloadVisualize
BU of 5mk2 by Molmil
Crystal structure of the His Domain Protein Tyrosine Phosphatase (HD-PTP/PTPN23) Bro1 domain (CHMP4B peptide complex structure)
Descriptor: Charged multivesicular body protein 4b, Tyrosine-protein phosphatase non-receptor type 23
Authors:Levy, C, Gahloth, D.
Deposit date:2016-12-02
Release date:2017-08-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for Specific Interaction of TGF beta Signaling Regulators SARA/Endofin with HD-PTP.
Structure, 25, 2017
5LM2
DownloadVisualize
BU of 5lm2 by Molmil
Crystal Structure of HD-PTP phosphatase
Descriptor: Tyrosine-protein phosphatase non-receptor type 23
Authors:Levy, C.
Deposit date:2016-07-28
Release date:2016-11-30
Last modified:2016-12-14
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural Basis for Selective Interaction between the ESCRT Regulator HD-PTP and UBAP1.
Structure, 24, 2016
3IA4
DownloadVisualize
BU of 3ia4 by Molmil
Moritella profunda dihydrofolate reductase (DHFR) in complex with NADPH and methotrexate (MTX)
Descriptor: Dihydrofolate reductase, METHOTREXATE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Levy, C.
Deposit date:2009-07-13
Release date:2009-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Are the Catalytic Properties of Enzymes from Piezophilic Organisms Pressure Adapted?
Chembiochem, 10, 2009
6Y2V
DownloadVisualize
BU of 6y2v by Molmil
Crystal structure of the double mutant L13R I16K of Low Molecular Weight Protein Tyrosine Phosphatase (LMW-PTP)
Descriptor: Low molecular weight phosphotyrosine protein phosphatase, PHOSPHATE ION, TRIETHYLENE GLYCOL
Authors:Levy, C.
Deposit date:2020-02-17
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Computational and structure-guided design of phosphoinositide substrate specificity into the tyrosine specific LMW-PTP enzyme.
Plos One, 15, 2020
6Y2W
DownloadVisualize
BU of 6y2w by Molmil
Crystal structure of the single mutant I16K of Low Molecular Weight Protein Tyrosine Phosphatase (LMW-PTP)
Descriptor: ACETATE ION, Low molecular weight phosphotyrosine protein phosphatase
Authors:Levy, C.
Deposit date:2020-02-17
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Computational and structure-guided design of phosphoinositide substrate specificity into the tyrosine specific LMW-PTP enzyme.
Plos One, 15, 2020
7NDS
DownloadVisualize
BU of 7nds by Molmil
Crystal structure of TphC in a closed conformation
Descriptor: Tripartite tricarboxylate transporter substrate binding protein, terephthalic acid
Authors:Levy, C.
Deposit date:2021-02-02
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of terephthalate recognition by solute binding protein TphC.
Nat Commun, 12, 2021
7NDR
DownloadVisualize
BU of 7ndr by Molmil
Crystal structure of TphC in an open conformation
Descriptor: 1,2-ETHANEDIOL, Tripartite tricarboxylate transporter substrate binding protein
Authors:Levy, C.
Deposit date:2021-02-02
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural basis of terephthalate recognition by solute binding protein TphC.
Nat Commun, 12, 2021
7YXF
DownloadVisualize
BU of 7yxf by Molmil
Crystal structure of CYP125 from Mycobacterium tuberculosis in complex with an inhibitor
Descriptor: 1-(2-piperazin-1-ylethyl)-5-pyridin-4-yl-indole, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Snee, M, Katariya, M, Levy, C, Leys, D.
Deposit date:2022-02-16
Release date:2023-03-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure Based Discovery of Inhibitors of CYP125 and CYP142 from Mycobacterium tuberculosis.
Chemistry, 29, 2023
7ZP7
DownloadVisualize
BU of 7zp7 by Molmil
Crystal structure of evolved photoenzyme EnT1.3 (truncated) with bound product
Descriptor: (1~{R},10~{R},12~{S})-15-oxa-8-azatetracyclo[8.5.0.0^{1,12}.0^{2,7}]pentadeca-2(7),3,5-trien-9-one, 1,2-ETHANEDIOL, EnT1.3 C
Authors:Hardy, F.J, Levy, C.
Deposit date:2022-04-26
Release date:2022-09-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A designed photoenzyme for enantioselective [2+2] cycloadditions.
Nature, 611, 2022
8J2X
DownloadVisualize
BU of 8j2x by Molmil
Saccharothrix syringae photocobilins protein, light state
Descriptor: BILIVERDINE IX ALPHA, COBALAMIN, Cobalamin-binding protein, ...
Authors:Zhang, S, Poddar, H, Levy, C, Leys, D.
Deposit date:2023-04-15
Release date:2024-04-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Photocobilins integrate B12 and bilin photochemistry for enzyme control.
Nat Commun, 15, 2024
5EDT
DownloadVisualize
BU of 5edt by Molmil
Crystal structure of Mycobacterium tuberculosis CYP121 in complex with LIG9
Descriptor: 2-azanyl-5-chloranyl-benzamide, Cytochrome P450 121, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanagh, M.E, Coyne, A.G, McLean, K.J, James, G.G, Levy, C, Marino, L.B, Carvalho, L.P.D, Chan, D.S.H, Hudson, S.A, Surade, S, Munro, A.W, Abell, C.
Deposit date:2015-10-22
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Fragment-Based Approaches to the Development of Mycobacterium tuberculosis CYP121 Inhibitors.
J.Med.Chem., 59, 2016
8C3W
DownloadVisualize
BU of 8c3w by Molmil
Crystal structure of a computationally designed heme binding protein, dnHEM1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Ortmayer, M, Levy, C.
Deposit date:2022-12-29
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Design of Heme Enzymes with a Tunable Substrate Binding Pocket Adjacent to an Open Metal Coordination Site.
J.Am.Chem.Soc., 145, 2023
6RQ5
DownloadVisualize
BU of 6rq5 by Molmil
CYP121 in complex with 3,5-dimethyl dicyclotyrosine
Descriptor: (3~{S},6~{S})-3-[(3,5-dimethyl-4-oxidanyl-phenyl)methyl]-6-[(4-hydroxyphenyl)methyl]piperazine-2,5-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mycocyclosin synthase, ...
Authors:Poddar, H, Levy, C.
Deposit date:2019-05-15
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure-Activity Relationships of cyclo (l-Tyrosyl-l-tyrosine) Derivatives Binding to Mycobacterium tuberculosis CYP121: Iodinated Analogues Promote Shift to High-Spin Adduct.
J.Med.Chem., 62, 2019
6RQ3
DownloadVisualize
BU of 6rq3 by Molmil
CYP121 in complex with 2,6-dimethyl dicyclotyrosine
Descriptor: (3~{S},6~{S})-3-[(2,6-dimethyl-4-oxidanyl-phenyl)methyl]-6-[(4-hydroxyphenyl)methyl]piperazine-2,5-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mycocyclosin synthase, ...
Authors:Poddar, H, Levy, C.
Deposit date:2019-05-15
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-Activity Relationships of cyclo (l-Tyrosyl-l-tyrosine) Derivatives Binding to Mycobacterium tuberculosis CYP121: Iodinated Analogues Promote Shift to High-Spin Adduct.
J.Med.Chem., 62, 2019
6RQE
DownloadVisualize
BU of 6rqe by Molmil
CYP121 in complex with 3-acetylene dicyclotyrosine
Descriptor: 3-acetylene dicyclotyrosine, Mycocyclosin synthase, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Poddar, H, Levy, C.
Deposit date:2019-05-15
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structure-Activity Relationships ofcyclo(l-Tyrosyl-l-tyrosine) Derivatives Binding toMycobacterium tuberculosisCYP121: Iodinated Analogues Promote Shift to High-Spin Adduct.
J.Med.Chem., 62, 2019
6RQ8
DownloadVisualize
BU of 6rq8 by Molmil
CYP121 in complex with 3-iodo dicyclotyrosine
Descriptor: (3~{S},6~{S})-3-[(4-hydroxyphenyl)methyl]-6-[(3-iodanyl-4-oxidanyl-phenyl)methyl]piperazine-2,5-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mycocyclosin synthase, ...
Authors:Poddar, H, Levy, C.
Deposit date:2019-05-15
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structure-Activity Relationships of cyclo (l-Tyrosyl-l-tyrosine) Derivatives Binding to Mycobacterium tuberculosis CYP121: Iodinated Analogues Promote Shift to High-Spin Adduct.
J.Med.Chem., 62, 2019
2CG8
DownloadVisualize
BU of 2cg8 by Molmil
The bifunctional dihydroneopterin aldolase 6-hydroxymethyl-7,8- dihydropterin synthase from Streptococcus pneumoniae
Descriptor: DIHYDRONEOPTERIN ALDOLASE 6-HYDROXYMETHYL-7,8-DIHYDROPTERIN SYNTHASE
Authors:Garcon, A, Levy, C, Derrick, J.P.
Deposit date:2006-02-28
Release date:2006-06-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of the Bifunctional Dihydroneopterin Aldolase/6-Hydroxymethyl-7,8-Dihydropterin Pyrophosphokinase from Streptococcus Pneumoniae.
J.Mol.Biol., 360, 2006
2VEG
DownloadVisualize
BU of 2veg by Molmil
Dihydropteroate synthase from Streptococcus pneumoniae: complex with 6-hydroxymethyl-7,8-dihydropterin monophosphate
Descriptor: DIHYDROPTEROATE SYNTHASE, PHOSPHATE ION, PTERIN-6-YL-METHYL-MONOPHOSPHATE
Authors:Derrick, J, Levy, C.
Deposit date:2007-10-24
Release date:2008-03-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Dihydropteroate Synthase from Streptococcus Pneumoniae: Structure, Ligand Recognition and Mechanism of Sulfonamide Resistance.
Biochem.J., 412, 2008
2VEF
DownloadVisualize
BU of 2vef by Molmil
Dihydropteroate synthase from Streptococcus pneumoniae
Descriptor: DIHYDROPTEROATE SYNTHASE, PHOSPHATE ION
Authors:Derrick, J.P, Levy, C.
Deposit date:2007-10-24
Release date:2008-03-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dihydropteroate Synthase from Streptococcus Pneumoniae: Structure, Ligand Recognition and Mechanism of Sulfonamide Resistance.
Biochem.J., 412, 2008
6HAU
DownloadVisualize
BU of 6hau by Molmil
KSHV PAN RNA Mta-response element fragment complexed with the globular domain of herpesvirus saimiri ORF57
Descriptor: ACETATE ION, MRE fragment of PAN RNA, ZINC ION, ...
Authors:Tunnicliffe, R.B, Levy, C, Ruiz Nivia, H.D, Sandri-Goldin, R.M, Golovanov, A.P.
Deposit date:2018-08-08
Release date:2018-11-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural identification of conserved RNA binding sites in herpesvirus ORF57 homologs: implications for PAN RNA recognition.
Nucleic Acids Res., 47, 2019
6HAT
DownloadVisualize
BU of 6hat by Molmil
Globular domain of herpesvirus saimiri ORF57
Descriptor: ACETATE ION, ZINC ION, mRNA export factor ICP27 homolog
Authors:Tunnicliffe, R.B, Levy, C, Ruiz Nivia, H.D, Sandri-Goldin, R.M, Golovanov, A.P.
Deposit date:2018-08-08
Release date:2018-11-21
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (1.856 Å)
Cite:Structural identification of conserved RNA binding sites in herpesvirus ORF57 homologs: implications for PAN RNA recognition.
Nucleic Acids Res., 47, 2019

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon