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PDB: 83 results

2Q4N
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Ensemble refinement of the crystal structure of protein from Arabidopsis thaliana At1g79260
Descriptor: Uncharacterized protein At1g79260
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
2Q4Q
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Ensemble refinement of the protein crystal structure of gene product from Homo sapiens Hs.95870
Descriptor: UPF0366 protein C11orf67
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Ensemble refinement of protein crystal structures: validation and application.
Structure, 15, 2007
2Q4W
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BU of 2q4w by Molmil
Ensemble refinement of the protein crystal structure of cytokinin oxidase/dehydrogenase (CKX) from Arabidopsis thaliana At5g21482
Descriptor: Cytokinin dehydrogenase 7, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of Arabidopsis thaliana cytokinin dehydrogenase.
Proteins, 70, 2008
2Q53
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Ensemble refinement of the crystal structure of uncharacterized protein loc79017 from Homo sapiens
Descriptor: Uncharacterized protein C7orf24
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of Homo sapiens protein LOC79017.
Proteins, 70, 2008
2Q4G
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BU of 2q4g by Molmil
Ensemble refinement of the protein crystal structure of human ribonuclease inhibitor complexed with ribonuclease I
Descriptor: CITRIC ACID, Ribonuclease inhibitor, Ribonuclease pancreatic
Authors:Levin, E.J, Kondrashov, D.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2007-05-31
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Inhibition of human pancreatic ribonuclease by the human ribonuclease inhibitor protein.
J.Mol.Biol., 368, 2007
4TQ6
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Structure of a UbiA homolog from Archaeoglobus fulgidus bound to Cd2+
Descriptor: CADMIUM ION, prenyltransferase
Authors:Huang, H, Levin, E.J, Bai, Y, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2014-06-10
Release date:2014-07-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.0678 Å)
Cite:Structure of a Membrane-Embedded Prenyltransferase Homologous to UBIAD1.
Plos Biol., 12, 2014
4TQ3
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Structure of a UbiA homolog from Archaeoglobus fulgidus bound to GPP and Mg2+
Descriptor: GERANYL DIPHOSPHATE, MAGNESIUM ION, Prenyltransferase
Authors:Huang, H, Levin, E.J, Bai, Y, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2014-06-10
Release date:2014-07-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4076 Å)
Cite:Structure of a Membrane-Embedded Prenyltransferase Homologous to UBIAD1.
Plos Biol., 12, 2014
4TQ4
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Structure of a UbiA homolog from Archaeoglobus fulgidus bound to DMAPP and Mg2+
Descriptor: DIMETHYLALLYL DIPHOSPHATE, MAGNESIUM ION, prenyltransferase
Authors:Huang, H, Levin, E.J, Bai, Y, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2014-06-10
Release date:2014-07-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5025 Å)
Cite:Structure of a Membrane-Embedded Prenyltransferase Homologous to UBIAD1.
Plos Biol., 12, 2014
4J9U
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Crystal Structure of the TrkH/TrkA potassium transport complex
Descriptor: HEXATANTALUM DODECABROMIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, POTASSIUM ION, ...
Authors:Cao, Y, Jin, X, Huang, H, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2013-02-17
Release date:2013-04-03
Last modified:2013-05-01
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Gating of the TrkH ion channel by its associated RCK protein TrkA.
Nature, 496, 2013
4TQ5
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Structure of a UbiA homolog from Archaeoglobus fulgidus
Descriptor: octyl beta-D-glucopyranoside, prenyltransferase
Authors:Huang, H, Levin, E.J, Bai, Y, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2014-06-10
Release date:2014-07-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.2023 Å)
Cite:Structure of a Membrane-Embedded Prenyltransferase Homologous to UBIAD1.
Plos Biol., 12, 2014
4J9V
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Crystal Structure of the TrkA Gating ring bound to ATP-gamma-S
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Potassium uptake protein TrkA, ...
Authors:Huang, H, Levin, E.J, Jin, X, Cao, Y, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2013-02-17
Release date:2013-04-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.051 Å)
Cite:Gating of the TrkH ion channel by its associated RCK protein TrkA.
Nature, 496, 2013
8UO8
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Structure of synaptic vesicle protein 2B with padsevonil
Descriptor: (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, (4R)-4-(2-chloro-2,2-difluoroethyl)-1-{[(4R)-2-(methoxymethyl)-6-(trifluoromethyl)imidazo[2,1-b][1,3,4]thiadiazol-5-yl]methyl}pyrrolidin-2-one, 1,2-DIDECANOYL-SN-GLYCERO-3-[PHOSPHO-L-SERINE], ...
Authors:Martin, M.F, Mittal, A, Levin, E, Adams, C, Yang, M, Ledecq, M, Horanyi, P.S, Coleman, J.A.
Deposit date:2023-10-19
Release date:2024-05-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of synaptic vesicle protein 2A and 2B bound to anticonvulsants.
Nat.Struct.Mol.Biol., 2024
8UOA
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Structure of the synaptic vesicle protein 2A Luminal domain in complex with a nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody, Synaptic vesicle glycoprotein 2A, ...
Authors:Mittal, A, Martin, M.F, Levin, E, Adams, C, Yang, M, Ledecq, M, Horanyi, P.S, Coleman, J.A.
Deposit date:2023-10-19
Release date:2024-05-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structures of synaptic vesicle protein 2A and 2B bound to anticonvulsants.
Nat.Struct.Mol.Biol., 2024
8UO9
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Structure of synaptic vesicle protein 2A in complex with a nanobody
Descriptor: (4R)-1-{[(4S)-2-(methoxymethyl)-6-(trifluoromethyl)imidazo[2,1-b][1,3,4]thiadiazol-5-yl]methyl}-4-(4,4,4-trifluorobutyl)pyrrolidin-2-one, 1,2-DIDECANOYL-SN-GLYCERO-3-[PHOSPHO-L-SERINE], 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mittal, A, Martin, M.F, Levin, E, Adams, C, Yang, M, Ledecq, M, Horanyi, P.S, Coleman, J.A.
Deposit date:2023-10-19
Release date:2024-05-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structures of synaptic vesicle protein 2A and 2B bound to anticonvulsants.
Nat.Struct.Mol.Biol., 2024
5IWS
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BU of 5iws by Molmil
Crystal structure of the transporter MalT, the EIIC domain from the maltose-specific phosphotransferase system
Descriptor: Protein-N(Pi)-phosphohistidine-sugar phosphotransferase (Enzyme II of the phosphotransferase system) (PTS system glucose-specific IIBC component), alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:McCoy, J.G, Ren, Z, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2016-03-22
Release date:2016-05-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.551 Å)
Cite:The Structure of a Sugar Transporter of the Glucose EIIC Superfamily Provides Insight into the Elevator Mechanism of Membrane Transport.
Structure, 24, 2016
4EZC
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Crystal Structure of the UT-B Urea Transporter from Bos Taurus
Descriptor: OCTANOIC ACID (2-HYDROXY-1-HYDROXYMETHYL-HEPTADEC-3-ENYL)-AMIDE, Urea transporter 1, beta-D-glucopyranose, ...
Authors:Cao, Y, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2012-05-02
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structure and permeation mechanism of a mammalian urea transporter.
Proc.Natl.Acad.Sci.USA, 109, 2012
4EZD
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Crystal Structure of the UT-B Urea Transporter from Bos Taurus Bound to Selenourea
Descriptor: OCTANOIC ACID (2-HYDROXY-1-HYDROXYMETHYL-HEPTADEC-3-ENYL)-AMIDE, Urea transporter 1, beta-D-glucopyranose, ...
Authors:Cao, Y, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2012-05-02
Release date:2012-06-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and permeation mechanism of a mammalian urea transporter.
Proc.Natl.Acad.Sci.USA, 109, 2012
4N7W
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Crystal Structure of the sodium bile acid symporter from Yersinia frederiksenii
Descriptor: CITRIC ACID, Transporter, sodium/bile acid symporter family, ...
Authors:Zhou, X, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2013-10-16
Release date:2013-12-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.951 Å)
Cite:Structural basis of the alternating-access mechanism in a bile acid transporter.
Nature, 505, 2013
4N7X
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The E254A mutant of the sodium bile acid symporter from Yersinia frederiksenii
Descriptor: Transporter, sodium/bile acid symporter family
Authors:Zhou, X, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2013-10-16
Release date:2013-12-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of the alternating-access mechanism in a bile acid transporter.
Nature, 505, 2013
3BJ3
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BU of 3bj3 by Molmil
met-Perch hemoglobin at pH 8.0
Descriptor: ACETYL GROUP, PROTOPORPHYRIN IX CONTAINING FE, hemoglobin alpha, ...
Authors:Aranda IV, R, Cai, H, Levin, E.J, Richards, M.P, Phillips Jr, G.N.
Deposit date:2007-12-02
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of fish versus mammalian hemoglobins: Effect of the heme pocket environment on autooxidation and hemin loss.
Proteins, 75, 2008
3PJZ
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BU of 3pjz by Molmil
Crystal Structure of the Potassium Transporter TrkH from Vibrio parahaemolyticus
Descriptor: POTASSIUM ION, Potassium uptake protein TrkH
Authors:Cao, Y, Jin, X, Huang, H, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2010-11-10
Release date:2011-01-19
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (3.506 Å)
Cite:Crystal structure of a potassium ion transporter, TrkH.
Nature, 471, 2011
3BJ1
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met-Perch Hemoglobin at pH 5.7
Descriptor: ACETYL GROUP, PROTOPORPHYRIN IX CONTAINING FE, hemoglobin alpha, ...
Authors:Aranda IV, R, Cai, H, Levin, E.J, Richards, M.P, Phillips Jr, G.N.
Deposit date:2007-12-02
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of fish versus mammalian hemoglobins: Effect of the heme pocket environment on autooxidation and hemin loss.
Proteins, 75, 2008
3BJ2
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BU of 3bj2 by Molmil
met-Perch Hemoglobin at pH 6.3
Descriptor: ACETYL GROUP, PROTOPORPHYRIN IX CONTAINING FE, hemoglobin alpha, ...
Authors:Aranda IV, R, Cai, H, Levin, E.J, Richards, M.P, Phillips Jr, G.N.
Deposit date:2007-12-02
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of fish versus mammalian hemoglobins: Effect of the heme pocket environment on autooxidation and hemin loss.
Proteins, 75, 2008
3QNQ
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Crystal structure of the transporter ChbC, the IIC component from the N,N'-diacetylchitobiose-specific phosphotransferase system
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, PTS system, ...
Authors:Cao, Y, Jin, X, Huang, H, Levin, E.J, Zhou, M, New York Consortium on Membrane Protein Structure (NYCOMPS)
Deposit date:2011-02-08
Release date:2011-04-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.295 Å)
Cite:Crystal structure of a phosphorylation-coupled saccharide transporter.
Nature, 473, 2011
2G12
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Photolyzed CO L29F Myoglobin: 316ns
Descriptor: CARBON MONOXIDE, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Aranda, R, Levin, E.J, Schotte, F, Anfinrud, P.A, Phillips Jr, G.N.
Deposit date:2006-02-13
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Time-dependent atomic coordinates for the dissociation of carbon monoxide from myoglobin.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006

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