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PDB: 231 results

3D6Q
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BU of 3d6q by Molmil
The RNase A- 5'-Deoxy-5'-N-piperidinouridine complex
Descriptor: 1-(5-deoxy-5-piperidin-1-yl-alpha-L-arabinofuranosyl)pyrimidine-2,4(1H,3H)-dione, CITRATE ANION, Ribonuclease pancreatic
Authors:Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G.
Deposit date:2008-05-20
Release date:2009-02-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation.
J.Med.Chem., 52, 2009
8QCW
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The crystal structure of the truncated form of Lotus japonicus kinase 1
Descriptor: non-specific serine/threonine protein kinase
Authors:Leonidas, D.D, Solovou, T.
Deposit date:2023-08-28
Release date:2024-02-21
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Biochemical and Structural Studies of LjSK1, a Lotus japonicus GSK3 beta /SHAGGY-like Kinase, Reveal Its Functional Role.
J.Agric.Food Chem., 72, 2024
4GAL
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CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH LACTOSE
Descriptor: GALECTIN-7, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Leonidas, D.D, Acharya, K.R.
Deposit date:1998-07-13
Release date:1998-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the recognition of carbohydrates by human galectin-7.
Biochemistry, 37, 1998
5GAL
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BU of 5gal by Molmil
CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH N-ACETYLLACTOSAMINE
Descriptor: GALECTIN-7, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Leonidas, D.D, Acharya, K.R.
Deposit date:1998-07-14
Release date:1998-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the recognition of carbohydrates by human galectin-7.
Biochemistry, 37, 1998
5MCB
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BU of 5mcb by Molmil
Glycogen phosphorylase in complex with chlorogenic acid.
Descriptor: Chlorogenic acid, Glycogen phosphorylase, muscle form, ...
Authors:Leonidas, D.D, Stravodimos, G.A, Kyriakis, E, Chatzileontiadou, D.S.M, Kantsadi, A.L.
Deposit date:2016-11-09
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Affinity Crystallography Reveals the Bioactive Compounds of Industrial Juicing Byproducts of Punica granatum for Glycogen Phosphorylase.
Curr Drug Discov Technol, 15, 2018
1QHC
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BU of 1qhc by Molmil
CRYSTAL STRUCTURE OF RIBONUCLEASE A IN COMPLEX WITH 5'-PHOSPHO-2'-DEOXYURIDINE-3'-PYROPHOSPHATE ADENOSINE-3'-PHOSPHATE
Descriptor: ADENYLATE-3'-PHOSPHATE-[[2'-DEOXY-URIDINE-5'-PHOSPHATE]-3'-PHOSPHATE], PROTEIN (RIBONUCLEASE A)
Authors:Leonidas, D.D, Acharya, K.R.
Deposit date:1999-05-12
Release date:1999-08-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Toward rational design of ribonuclease inhibitors: high-resolution crystal structure of a ribonuclease A complex with a potent 3',5'-pyrophosphate-linked dinucleotide inhibitor.
Biochemistry, 38, 1999
2G8Q
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BU of 2g8q by Molmil
The crystal structure of RNase A from monoclinic crystals at 100 K
Descriptor: Ribonuclease pancreatic
Authors:Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G.
Deposit date:2006-03-03
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The binding of 3'-N-piperidine-4-carboxyl-3'-deoxy-ara-uridine to ribonuclease A in the crystal.
Bioorg.Med.Chem., 14, 2006
2GAL
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BU of 2gal by Molmil
CRYSTAL STRUCTURE OF HUMAN GALECTIN-7 IN COMPLEX WITH GALACTOSE
Descriptor: GALECTIN-7, beta-D-galactopyranose
Authors:Leonidas, D.D, Acharya, K.R.
Deposit date:1998-07-13
Release date:1998-11-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the recognition of carbohydrates by human galectin-7.
Biochemistry, 37, 1998
2G8R
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BU of 2g8r by Molmil
The crystal structure of the RNase A- 3-N-piperidine-4-carboxyl-3-deoxy-ara-uridine complex
Descriptor: 1-[3-(4-CARBOXYPIPERIDIN-1-YL)-3-DEOXY-BETA-D-ARABINOFURANOSYL]PYRIMIDINE-2,4(1H,3H)-DIONE, Ribonuclease pancreatic
Authors:Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G.
Deposit date:2006-03-03
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The binding of 3'-N-piperidine-4-carboxyl-3'-deoxy-ara-uridine to ribonuclease A in the crystal.
Bioorg.Med.Chem., 14, 2006
1K58
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BU of 1k58 by Molmil
Crystal Structure of Human Angiogenin Variant D116H
Descriptor: Angiogenin
Authors:Leonidas, D.D, Shapiro, R, Subbarao, G.V, Russo, A, Acharya, K.R.
Deposit date:2001-10-10
Release date:2002-03-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic studies on the role of the C-terminal segment of human angiogenin in defining enzymatic potency.
Biochemistry, 41, 2002
1K5B
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BU of 1k5b by Molmil
Crystal Structure of Human Angiogenin Variant des(121-123)
Descriptor: Angiogenin, CITRIC ACID
Authors:Leonidas, D.D, Shapiro, R, Subbarao, G.V, Russo, A, Acharya, K.R.
Deposit date:2001-10-10
Release date:2002-03-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic studies on the role of the C-terminal segment of human angiogenin in defining enzymatic potency.
Biochemistry, 41, 2002
1K59
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BU of 1k59 by Molmil
Crystal Structure of Human Angiogenin Variant Q117G
Descriptor: CITRIC ACID, angiogenin
Authors:Leonidas, D.D, Shapiro, R, Subbarao, G.V, Russo, A, Acharya, K.R.
Deposit date:2001-10-10
Release date:2002-03-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic studies on the role of the C-terminal segment of human angiogenin in defining enzymatic potency.
Biochemistry, 41, 2002
1K5A
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BU of 1k5a by Molmil
Crystal structure of human angiogenin double variant I119A/F120A
Descriptor: Angiogenin
Authors:Leonidas, D.D, Shapiro, R, Subbarao, G.V, Russo, A, Acharya, K.R.
Deposit date:2001-10-10
Release date:2002-03-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Crystallographic studies on the role of the C-terminal segment of human angiogenin in defining enzymatic potency.
Biochemistry, 41, 2002
1O0H
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BU of 1o0h by Molmil
Ribonuclease A in complex with 5'-ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Ribonuclease pancreatic
Authors:Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M.
Deposit date:2003-02-21
Release date:2003-12-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors
PROTEIN SCI., 12, 2003
1O0F
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BU of 1o0f by Molmil
RNASE A in complex with 3',5'-ADP
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, Ribonuclease pancreatic
Authors:Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M.
Deposit date:2003-02-21
Release date:2003-12-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors
PROTEIN SCI., 12, 2003
1O0M
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BU of 1o0m by Molmil
Ribonuclease A in complex with uridine-2'-phosphate
Descriptor: PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER, Ribonuclease pancreatic
Authors:Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M.
Deposit date:2003-02-24
Release date:2003-12-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors
PROTEIN SCI., 12, 2003
1O0N
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BU of 1o0n by Molmil
Ribonuclease A in complex with uridine-3'-phosphate
Descriptor: 3'-URIDINEMONOPHOSPHATE, Ribonuclease pancreatic
Authors:Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M.
Deposit date:2003-02-24
Release date:2003-12-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors
PROTEIN SCI., 12, 2003
1O0O
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BU of 1o0o by Molmil
Ribonuclease A in complex with adenosine-2',5'-diphosphate
Descriptor: ADENOSINE-2'-5'-DIPHOSPHATE, Ribonuclease pancreatic
Authors:Leonidas, D.D, Oikonomakos, N.G, Chrysina, E.D, Kosmopoulou, M.N, Vlassi, M.
Deposit date:2003-02-24
Release date:2003-12-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High-resolution crystal structures of ribonuclease A complexed with adenylic and uridylic nucleotide inhibitors. Implications for structure-based design of ribonucleolytic inhibitors
PROTEIN SCI., 12, 2003
3D7B
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BU of 3d7b by Molmil
The Ribonuclease A- 5'-Deoxy-5'-N-pyrrolidinouridine complex
Descriptor: 1-(5-deoxy-5-pyrrolidin-1-yl-alpha-L-arabinofuranosyl)pyrimidine-2,4(1H,3H)-dione, CITRATE ANION, Ribonuclease pancreatic
Authors:Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G.
Deposit date:2008-05-21
Release date:2009-02-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation.
J.Med.Chem., 52, 2009
3D6O
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BU of 3d6o by Molmil
The RNase A- 5'-Deoxy-5'-N-(ethyl isonipecotatyl)uridine complex
Descriptor: 1-{5-deoxy-5-[4-(ethoxycarbonyl)piperidin-1-yl]-alpha-L-arabinofuranosyl}pyrimidine-2,4(1H,3H)-dione, Ribonuclease pancreatic
Authors:Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G.
Deposit date:2008-05-20
Release date:2009-02-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation.
J.Med.Chem., 52, 2009
3D6P
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BU of 3d6p by Molmil
RNase A- 5'-Deoxy-5'-N-morpholinouridine complex
Descriptor: 1-(5-deoxy-5-morpholin-4-yl-alpha-L-arabinofuranosyl)pyrimidine-2,4(1H,3H)-dione, Ribonuclease pancreatic
Authors:Leonidas, D.D, Zogrpahos, S.E, Oikonomakos, N.G.
Deposit date:2008-05-20
Release date:2009-02-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Morpholino, piperidino, and pyrrolidino derivatives of pyrimidine nucleosides as inhibitors of ribonuclease A: synthesis, biochemical, and crystallographic evaluation.
J.Med.Chem., 52, 2009
1H53
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BU of 1h53 by Molmil
Binding of Phosphate and Pyrophosphate ions at the active site of human Angiogenin as revealed by X-ray Crystallography
Descriptor: ANGIOGENIN, CITRIC ACID, PHOSPHATE ION
Authors:Leonidas, D.D, Chavali, G.B, Jardine, A.M, Li, S, Shapiro, R, Acharya, K.R.
Deposit date:2001-05-18
Release date:2001-08-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of Phosphate and Pyrophosphate Ions at the Active Site of Human Angiogenin as Revealed by X-Ray Crystallography
Protein Sci., 10, 2001
1HBY
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BU of 1hby by Molmil
Binding of Phosphate and Pyrophosphate ions at the active site of human angiogenin as revealed by X-ray Crystallography
Descriptor: ANGIOGENIN, PHOSPHATE ION
Authors:Leonidas, D.D, Chavali, G.B, Jardine, A.S, Li, S, Shapiro, R, Acharya, K.R.
Deposit date:2001-04-21
Release date:2001-08-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of Phosphate and Pyrophosphate Ions at the Active Site of Human Angiogenin as Revealed by X-Ray Crystallography
Protein Sci., 10, 2001
1H52
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BU of 1h52 by Molmil
Binding of Phosphate and Pyrophosphate ions at the active site of human Angiogenin as revealed by X-ray Crystallography
Descriptor: ANGIOGENIN, PYROPHOSPHATE 2-
Authors:Leonidas, D.D, Chavali, G.B, Jardine, A.M, Li, S, Shapiro, R, Acharya, K.R.
Deposit date:2001-05-18
Release date:2001-08-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Binding of Phosphate and Pyrophosphate Ions at the Active Site of Human Angiogenin as Revealed by X-Ray Crystallography
Protein Sci., 10, 2001
2ANG
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BU of 2ang by Molmil
CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN OF THE MET(-1) FORM
Descriptor: ANGIOGENIN, CITRIC ACID
Authors:Leonidas, D.D, Allen, S.C, Acharya, K.R.
Deposit date:1998-11-12
Release date:1999-04-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Refined crystal structures of native human angiogenin and two active site variants: implications for the unique functional properties of an enzyme involved in neovascularisation during tumour growth.
J.Mol.Biol., 285, 1999

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数据于2024-07-17公开中

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