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PDB: 793 results

6K64
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BU of 6k64 by Molmil
Application of anti-helix antibodies in protein structure determination (8188-3LRH)
Descriptor: 3LRH intrabody, Protein A
Authors:Lee, J.O, Jin, M.S, Kim, J.W, Kim, S, Lee, H, Cho, G.Y.
Deposit date:2019-06-01
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.933 Å)
Cite:Application of antihelix antibodies in protein structure determination.
Proc.Natl.Acad.Sci.USA, 116, 2019
6K6A
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BU of 6k6a by Molmil
Application of anti-helix antibodies in protein structure determination (8188cys-3LRHcys)
Descriptor: 3LRH intrabody, Engineered Protein A
Authors:Lee, J.O, Jin, M.S, Kim, J.W, Kim, S, Lee, H, Cho, G.Y.
Deposit date:2019-06-02
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Application of antihelix antibodies in protein structure determination.
Proc.Natl.Acad.Sci.USA, 116, 2019
6K69
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BU of 6k69 by Molmil
Application of anti-helix antibodies in protein structure determination (9213-3LRH)
Descriptor: 3LRH intrabody, Engineered T4 lysozyme
Authors:Lee, J.O, Jin, M.S, Kim, J.W, Kim, S, Lee, H, Cho, G.Y.
Deposit date:2019-06-01
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Application of antihelix antibodies in protein structure determination.
Proc.Natl.Acad.Sci.USA, 116, 2019
6IYM
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BU of 6iym by Molmil
Fumarylacetoacetate hydrolase (EaFAH) from psychrophilic Exiguobacterium antarcticum
Descriptor: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase, MAGNESIUM ION
Authors:Lee, J.H, Lee, C.W.
Deposit date:2018-12-17
Release date:2019-04-03
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional analysis of a dimeric fumarylacetoacetate hydrolase (EaFAH) from psychrophilic Exiguobacterium antarcticum.
Biochem. Biophys. Res. Commun., 509, 2019
8OM9
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BU of 8om9 by Molmil
MutSbeta bound to (CAG)2 DNA (open form)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
Authors:Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
Deposit date:2023-03-31
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:MutSbeta bound to (CAG)2 DNA (open form)
To Be Published
8OLX
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BU of 8olx by Molmil
MutSbeta bound to (CAG)2 DNA (canonical form)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (25-MER), DNA mismatch repair protein Msh2, ...
Authors:Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
Deposit date:2023-03-30
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:MutSbeta bound to (CAG)2 DNA (canonical form)
To Be Published
8OMO
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BU of 8omo by Molmil
DNA-unbound MutSbeta-ATP complex (bent clamp form)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
Authors:Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
Deposit date:2023-03-31
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:DNA-unbound MutSbeta-ATP complex (bent clamp form)
To Be Published
8OM5
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BU of 8om5 by Molmil
DNA-free open form of MutSbeta
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
Authors:Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
Deposit date:2023-03-31
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:DNA-free open form of MutSbeta
To Be Published
8OMA
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BU of 8oma by Molmil
MutSbeta bound to 61bp homoduplex DNA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
Authors:Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
Deposit date:2023-03-31
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:MutSbeta bound to 61bp homoduplex DNA
To Be Published
8OMQ
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BU of 8omq by Molmil
DNA-unbound MutSbeta-ATP complex (straight clamp form)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA mismatch repair protein Msh2, DNA mismatch repair protein Msh3, ...
Authors:Lee, J.-H, Thomsen, M, Daub, H, Steinbacher, S, Sztyler, A, Thieulin-Pardo, G, Neudegger, T, Plotnikov, N, Iyer, R.R, Wilkinson, H, Monteagudo, E, Felsenfeld, D.P, Haque, T, Finley, M, Dominguez, C, Vogt, T.F, Prasad, B.C.
Deposit date:2023-03-31
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:DNA-unbound MutSbeta-ATP complex (straight clamp form)
To Be Published
5DO7
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BU of 5do7 by Molmil
Crystal Structure of the Human Sterol Transporter ABCG5/ABCG8
Descriptor: ATP-binding cassette sub-family G member 5, ATP-binding cassette sub-family G member 8
Authors:Lee, J.-Y, Kinch, L.N, Borek, D.M, Urbatsch, I.L, Xie, X.-S, Grishin, N.V, Cohen, J.C, Otwinowski, Z, Hobbs, H.H, Rosenbaum, D.M.
Deposit date:2015-09-10
Release date:2016-05-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.93 Å)
Cite:Crystal structure of the human sterol transporter ABCG5/ABCG8.
Nature, 533, 2016
2AOR
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BU of 2aor by Molmil
Crystal structure of MutH-hemimethylated DNA complex
Descriptor: 5'-D(*CP*AP*GP*GP*(6MA)P*TP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*AP*TP*CP*CP*TP*G)-3', CALCIUM ION, DNA mismatch repair protein mutH
Authors:Lee, J.Y, Chang, J, Joseph, N, Ghirlando, R, Rao, D.N, Yang, W.
Deposit date:2005-08-13
Release date:2005-10-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:MutH complexed with hemi- and unmethylated DNAs: coupling base recognition and DNA cleavage.
Mol.Cell, 20, 2005
1NC3
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BU of 1nc3 by Molmil
Crystal structure of E. coli MTA/AdoHcy nucleosidase complexed with formycin A (FMA)
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, MTA/SAH nucleosidase
Authors:Lee, J.E, Cornell, K.A, Riscoe, M.K, Howell, P.L.
Deposit date:2002-12-04
Release date:2003-03-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of Escherichia coli 5'-methylthioadenosine/ S-adenosylhomocysteine nucleosidase inhibitor complexes provide insight into the conformational changes required for substrate binding and catalysis.
J.Biol.Chem., 278, 2003
7COE
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BU of 7coe by Molmil
Crystal structure of Receptor binding domain of MERS-CoV and KNIH90-F1 Fab complex
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain, ...
Authors:Lee, J.Y, Song, J.Y, Lee, H.S, Hong, E, Jang, T.H.
Deposit date:2020-08-04
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of a novel antibody against the spike protein inhibits Middle East respiratory syndrome coronavirus infections.
Sci Rep, 12, 2022
7CM0
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BU of 7cm0 by Molmil
Crystal structure of a glutaminyl cyclase in complex with NHV-1009
Descriptor: 1-(cyclopentylmethyl)-1-[3-methoxy-4-(2-morpholin-4-ylethoxy)phenyl]-3-[3-(5-methylimidazol-1-yl)propyl]urea, Glutaminyl-peptide cyclotransferase, ZINC ION
Authors:Lee, J.W, Song, J.Y, Jang, T.H, Ha, J.H.
Deposit date:2020-07-23
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of highly potent human glutaminyl cyclase (QC) inhibitors as anti-Alzheimer's agents by the combination of pharmacophore-based and structure-based design.
Eur.J.Med.Chem., 226, 2021
8T46
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BU of 8t46 by Molmil
Transporter associated with antigen processing (TAP) in the apo state
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-08
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Principles of peptide selection by the transporter associated with antigen processing.
Proc.Natl.Acad.Sci.USA, 121, 2024
3INU
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BU of 3inu by Molmil
Crystal structure of an unbound KZ52 neutralizing anti-Ebolavirus antibody.
Descriptor: GLYCEROL, KZ52 antibody fragment heavy chain, KZ52 antibody fragment light chain, ...
Authors:Lee, J.E, Fusco, M.L, Abelson, D.M, Hessell, A.J, Burton, D.R, Saphire, E.O.
Deposit date:2009-08-12
Release date:2009-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Techniques and tactics used in determining the structure of the trimeric ebolavirus glycoprotein.
Acta Crystallogr.,Sect.D, 65, 2009
6KTB
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BU of 6ktb by Molmil
Crystal structure of B. halodurans MntR in apo form
Descriptor: HTH-type transcriptional regulator MntR, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Lee, J.Y, Lee, M.Y.
Deposit date:2019-08-26
Release date:2019-12-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of the manganese transport regulator MntR from Bacillus halodurans in apo and manganese bound forms.
Plos One, 14, 2019
8T4J
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BU of 8t4j by Molmil
Transporter associated with antigen processing (TAP) bound to the 14-mer peptide LPAVVGLSPGEQEY
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, HLA-B35 specific peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 14-mer peptide LPAVVGLSPGEQEY
To Be Published
8T4G
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BU of 8t4g by Molmil
Transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, HLA-C4 specific peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL
To Be Published
8T4I
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BU of 8t4i by Molmil
Transporter associated with antigen processing (TAP) bound to the 7-mer peptide RRYSTEL
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, Synthetic 7-mer peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 7-mer peptide RRYSTEL
To Be Published
8T4F
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BU of 8t4f by Molmil
Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, Histone H3.3C peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL
To Be Published
8T4H
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BU of 8t4h by Molmil
Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, Synthetic 8-mer peptide
Authors:Lee, J, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL
To Be Published
8T4E
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BU of 8t4e by Molmil
Transporter associated with antigen processing (TAP) bound to the 9-mer peptide ILKEPVHGV
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, Transframe peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 9-mer peptide ILKEPVHGV
To Be Published
5V8L
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BU of 5v8l by Molmil
BG505 SOSIP.664 trimer in complex with broadly neutralizing HIV antibodies 3BNC117 and PGT145
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3BNC117 antibody, ...
Authors:Lee, J.H, Ward, A.B.
Deposit date:2017-03-22
Release date:2017-05-03
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:A Broadly Neutralizing Antibody Targets the Dynamic HIV Envelope Trimer Apex via a Long, Rigidified, and Anionic beta-Hairpin Structure.
Immunity, 46, 2017

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PDB entries from 2024-07-03

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