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PDB: 219 件
1S36
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Crystal structure of a Ca2+-discharged photoprotein: Implications for the mechanisms of the calcium trigger and the bioluminescence
分子名称: CHLORIDE ION, GLYCEROL, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE, ...
著者Deng, L, Markova, S.V, Vysotski, E.S, Liu, Z.-J, Lee, J, Rose, J, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-01-12
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Crystal structure of a Ca2+-discharged photoprotein: implications for mechanisms of the calcium trigger and bioluminescence
J.Biol.Chem., 279, 2004
1SL8
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BU of 1sl8 by Molmil
Calcium-loaded apo-aequorin from Aequorea victoria
分子名称: Aequorin 1, CALCIUM ION
著者Deng, L, Markova, S.V, Vysotski, E.S, Liu, Z.J, Lee, J, Rose, J, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-03-05
公開日2004-12-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献All three Ca2+-binding loops of photoproteins bind calcium ions: The crystal structures of calcium-loaded apo-aequorin and apo-obelin.
Protein Sci., 14, 2005
1SL9
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BU of 1sl9 by Molmil
Obelin from Obelia longissima
分子名称: C2-HYDROPEROXY-COELENTERAZINE, Obelin
著者Deng, L, Markova, S, Vysotski, E, Liu, Z.-J, Lee, J, Rose, J, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-03-05
公開日2005-07-19
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Obelin from Obelia longissima
To be Published
1SL7
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BU of 1sl7 by Molmil
Crystal structure of calcium-loaded apo-obelin from Obelia longissima
分子名称: CALCIUM ION, Obelin
著者Deng, L, Markova, S.V, Vysotski, E.S, Liu, Z.J, Lee, J, Rose, J, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2004-03-05
公開日2004-12-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献All three Ca2+-binding loops of photoproteins bind calcium ions: The crystal structures of calcium-loaded apo-aequorin and apo-obelin.
Protein Sci., 14, 2005
5YO9
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BU of 5yo9 by Molmil
Crystal structure of KAS III from Acinetobacter baumannii
分子名称: 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein, COENZYME A, GLYCEROL
著者Lee, W.C, Jung, M, Lee, J, Kim, Y.
登録日2017-10-27
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.002 Å)
主引用文献Crystal structure of a novel KAS III from Acinetobacter baumannii
to be published
5YOA
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BU of 5yoa by Molmil
Crystal structure of KAS III from Acinetobacter baumannii
分子名称: 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein, OCTANOYL-COENZYME A
著者Lee, W.C, Jung, M, Lee, J, Kim, Y.
登録日2017-10-27
公開日2018-12-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal structure of a novel KAS III from Acinetobacter baumannii
to be published
5YZU
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BU of 5yzu by Molmil
Crystal structure of KAS III from Acinetobacter baumannii
分子名称: 3-Oxoacyl-[acyl-carrier-(ACP)] synthase III C terminal family protein
著者Lee, W.C, Jung, M, Lee, J, Kim, Y.
登録日2017-12-15
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.122 Å)
主引用文献Crystal structure of a novel KAS III from Acinetobacter baumannii
to be published
2L5N
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BU of 2l5n by Molmil
NMR Structure of YbbR family protein Dhaf_0833 (residues 32-118) from Desulfitobacterium hafniense DCB-2: Northeast Structural Genomics Consortium target DhR29B
分子名称: YbbR family protein
著者Cort, J.R, Barb, A.W, Lee, H, Ramelot, T.A, Yang, Y, Belote, R.L, Ciccosanti, C.R, Haleema, J, Acton, T.B, Xiao, R.R, Everett, J.K, Montelione, G.T, Prestegard, J.H, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2010-11-02
公開日2010-12-29
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structures of domains I and IV from YbbR are representative of a widely distributed protein family.
Protein Sci., 20, 2011
2JEL
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BU of 2jel by Molmil
JEL42 FAB/HPR COMPLEX
分子名称: HISTIDINE-CONTAINING PROTEIN, JEL42 FAB FRAGMENT, SULFATE ION
著者Prasad, L, Waygood, E.B, Lee, J.S, Delbaere, L.T.J.
登録日1998-02-24
公開日1998-05-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The 2.5 A resolution structure of the jel42 Fab fragment/HPr complex
J.Mol.Biol., 280, 1998
1QV1
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BU of 1qv1 by Molmil
Atomic resolution structure of obelin from Obelia longissima
分子名称: C2-HYDROPEROXY-COELENTERAZINE, CALCIUM ION, COBALT (II) ION, ...
著者Liu, Z.J, Vysotski, E.S, Deng, L, Lee, J, Rose, J, Wang, B.C.
登録日2003-08-26
公開日2003-11-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic resolution structure of obelin: soaking with calcium enhances electron density of the second oxygen atom substituted at the C2-position of coelenterazine.
Biochem.Biophys.Res.Commun., 311, 2003
1QV0
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BU of 1qv0 by Molmil
Atomic resolution structure of obelin from Obelia longissima
分子名称: C2-HYDROPEROXY-COELENTERAZINE, COBALT (II) ION, GLYCEROL, ...
著者Liu, Z.J, Vysotski, E.S, Deng, L, Lee, J, Rose, J, Wang, B.C.
登録日2003-08-26
公開日2003-11-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic resolution structure of obelin: soaking with calcium enhances electron density of the second oxygen atom substituted at the C2-position of coelenterazine.
Biochem.Biophys.Res.Commun., 311, 2003
6N8V
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BU of 6n8v by Molmil
Hsp104DWB open conformation
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein 104
著者Lee, S, Rho, S.H, Lee, J, Sung, N, Liu, J, Tsai, F.T.F.
登録日2018-11-30
公開日2019-01-02
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (9.3 Å)
主引用文献Cryo-EM Structures of the Hsp104 Protein Disaggregase Captured in the ATP Conformation.
Cell Rep, 26, 2019
6N8Z
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BU of 6n8z by Molmil
HSP104DWB extended conformation
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein 104
著者Lee, S, Rho, S.H, Lee, J, Sung, N, Liu, J, Tsai, F.T.F.
登録日2018-11-30
公開日2019-01-02
最終更新日2019-01-16
実験手法ELECTRON MICROSCOPY (9.3 Å)
主引用文献Cryo-EM Structures of the Hsp104 Protein Disaggregase Captured in the ATP Conformation.
Cell Rep, 26, 2019
6N8T
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BU of 6n8t by Molmil
Hsp104DWB closed conformation
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein 104
著者Lee, S, Rho, S.H, Lee, J, Sung, N, Liu, J, Tsai, F.T.F.
登録日2018-11-30
公開日2019-01-02
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Cryo-EM Structures of the Hsp104 Protein Disaggregase Captured in the ATP Conformation.
Cell Rep, 26, 2019
2F8P
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BU of 2f8p by Molmil
Crystal structure of obelin following Ca2+ triggered bioluminescence suggests neutral coelenteramide as the primary excited state
分子名称: CALCIUM ION, N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE, Obelin
著者Liu, Z.J, Stepanyuk, G.A, Vysotski, E.S, Lee, J, Wang, B.C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2005-12-03
公開日2006-02-14
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Crystal structure of obelin after Ca2+-triggered bioluminescence suggests neutral coelenteramide as the primary excited state.
Proc.Natl.Acad.Sci.Usa, 103, 2006
6NZ6
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BU of 6nz6 by Molmil
YcjX-GDP (type II)
分子名称: GUANOSINE-5'-DIPHOSPHATE, YcjX Stress Protein
著者Tsai, J, Sung, N, Lee, J, Chang, C, Lee, S, Tsai, F.T.
登録日2019-02-12
公開日2019-09-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of the YcjX Stress Protein Reveals a Ras-Like GTP-Binding Protein.
J.Mol.Biol., 431, 2019
6NZ5
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BU of 6nz5 by Molmil
YcjX-GDPCP
分子名称: GUANOSINE-5'-DIPHOSPHATE, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, YcjX Stress Protein
著者Lee, S, Tsai, J, Tsai, F.T, Sung, N, Lee, J, Chang, C.
登録日2019-02-12
公開日2019-09-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.233 Å)
主引用文献Crystal Structure of the YcjX Stress Protein Reveals a Ras-Like GTP-Binding Protein.
J.Mol.Biol., 431, 2019
1N6A
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BU of 1n6a by Molmil
Structure of SET7/9
分子名称: S-ADENOSYLMETHIONINE, SET domain-containing protein 7
著者Kwon, T.W, Chang, J.H, Kwak, E, Lee, C.W, Joachimiak, A, Kim, Y.C, Lee, J, Cho, Y.
登録日2002-11-09
公開日2003-02-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanism of histone lysine methyl transfer revealed by the structure of SET7/9-AdoMet
EMBO J., 22, 2003
1P25
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BU of 1p25 by Molmil
Crystal structure of nickel(II)-d(GGCGCC)2
分子名称: 5'-D(*GP*GP*CP*GP*CP*C)-3', NICKEL (II) ION
著者Labiuk, S.L, Delbaere, L.T, Lee, J.S.
登録日2003-04-14
公開日2003-12-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Cobalt(II), nickel(II) and zinc(II) do not bind to intra-helical N(7) guanine positions in the B-form crystal structure of d(GGCGCC)
J.Biol.Inorg.Chem., 8, 2003
1P26
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BU of 1p26 by Molmil
Crystal structure of zinc(II)-d(GGCGCC)2
分子名称: 5'-D(*GP*GP*CP*GP*CP*C)-3', ZINC ION
著者Labiuk, S.L, Delbaere, L.T, Lee, J.S.
登録日2003-04-14
公開日2003-12-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.92 Å)
主引用文献Cobalt(II), nickel(II) and zinc(II) do not bind to intra-helical N(7) guanine positions in the B-form crystal structure of d(GGCGCC)
J.Biol.Inorg.Chem., 8, 2003
1P24
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BU of 1p24 by Molmil
Crystal structure of cobalt(II)-d(GGCGCC)2
分子名称: COBALT (II) ION, DNA (5'-D(*GP*GP*CP*GP*CP*C)-3')
著者Labiuk, S.L, Delbaere, L.T, Lee, J.S.
登録日2003-04-14
公開日2003-12-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Cobalt(II), nickel(II) and zinc(II) do not bind to intra-helical N(7) guanine positions in the B-form crystal structure of d(GGCGCC)
J.Biol.Inorg.Chem., 8, 2003
1JF0
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BU of 1jf0 by Molmil
The Crystal Structure of Obelin from Obelia geniculata at 1.82 A Resolution
分子名称: C2-HYDROPEROXY-COELENTERAZINE, Obelin
著者Deng, L, Vysotski, E, Liu, Z.-J, Markova, S, Lee, J, Rose, J, Wang, B.-C.
登録日2001-06-19
公開日2001-07-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献The Crystal Structure of Obelin from Obelia geniculata at 1.82 Angstrom Resolution
To be Published
1JF2
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Crystal Structure of W92F obelin mutant from Obelia longissima at 1.72 Angstrom resolution
分子名称: C2-HYDROPEROXY-COELENTERAZINE, obelin
著者Liu, Z.-J, Vysotski, E.S, Deng, L, Markova, S.V, Lee, J, Rose, J.P, Wang, B.-C.
登録日2001-06-19
公開日2001-07-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Violet bioluminescence and fast kinetics from W92F obelin: structure-based proposals for the bioluminescence triggering and the identification of the emitting species.
Biochemistry, 42, 2003
1WOG
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BU of 1wog by Molmil
Crystal Structure of Agmatinase Reveals Structural Conservation and Inhibition Mechanism of the Ureohydrolase Superfamily
分子名称: HEXANE-1,6-DIAMINE, MANGANESE (II) ION, agmatinase
著者Ahn, H.J, Kim, K.H, Lee, J, Ha, J.-Y, Lee, H.H, Kim, D, Yoon, H.-J, Kwon, A.-R, Suh, S.W.
登録日2004-08-18
公開日2004-09-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of agmatinase reveals structural conservation and inhibition mechanism of the ureohydrolase superfamily
J.Biol.Chem., 279, 2004
1WOH
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BU of 1woh by Molmil
Crystal Structure of Agmatinase Reveals Structural Conservation and Inhibition Mechanism of the Ureohydrolase Superfamily
分子名称: agmatinase
著者Ahn, H.J, Kim, K.H, Lee, J, Ha, J.-Y, Lee, H.H, Kim, D, Yoon, H.-J, Kwon, A.-R, Suh, S.W.
登録日2004-08-18
公開日2004-09-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of agmatinase reveals structural conservation and inhibition mechanism of the ureohydrolase superfamily
J.Biol.Chem., 279, 2004

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