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PDB: 209 results

7WI1
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The mutant variant of PNGM-1, H93 was substituuted for alanine to study metal coordination
Descriptor: Metallo-beta-lactamase PNGM-1, ZINC ION
Authors:Park, Y.S, Kang, L.W, Lee, J.H.
Deposit date:2022-01-01
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural Study of Metal Binding and Coordination in Ancient Metallo-beta-Lactamase PNGM-1 Variants.
Int J Mol Sci, 21, 2020
2B7Q
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Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori with nicotinate mononucleotide
Descriptor: NICOTINATE MONONUCLEOTIDE, Probable nicotinate-nucleotide pyrophosphorylase
Authors:Kim, M.K, Im, Y.J, Lee, J.H, Eom, S.H.
Deposit date:2005-10-05
Release date:2006-02-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori
Proteins, 63, 2006
2B7P
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Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori with phthalic acid
Descriptor: PHTHALIC ACID, Probable nicotinate-nucleotide pyrophosphorylase, SULFATE ION
Authors:Kim, M.K, Im, Y.J, Lee, J.H, Eom, S.H.
Deposit date:2005-10-05
Release date:2006-02-14
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori
Proteins, 63, 2006
2B7N
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Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori
Descriptor: Probable nicotinate-nucleotide pyrophosphorylase, QUINOLINIC ACID, SULFATE ION
Authors:Kim, M.K, Im, Y.J, Lee, J.H, Eom, S.H.
Deposit date:2005-10-04
Release date:2006-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of quinolinic acid phosphoribosyltransferase from Helicobacter pylori
Proteins, 63, 2006
1XHK
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BU of 1xhk by Molmil
Crystal structure of M. jannaschii Lon proteolytic domain
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative protease La homolog, SULFATE ION
Authors:Im, Y.J, Na, Y, Kang, G.B, Rho, S.-H, Kim, M.-K, Lee, J.H, Chung, C.H, Eom, S.H.
Deposit date:2004-09-20
Release date:2004-10-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The active site of a lon protease from Methanococcus jannaschii distinctly differs from the canonical catalytic Dyad of Lon proteases.
J.Biol.Chem., 279, 2004
1YNX
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Solution structure of DNA binding domain A (DBD-A) of S.cerevisiae Replication Protein A (RPA)
Descriptor: Replication factor-A protein 1
Authors:Park, C.J, Lee, J.H, Choi, B.S.
Deposit date:2005-01-26
Release date:2006-01-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the DNA-binding domain of RPA from Saccharomyces cerevisiae and its interaction with single-stranded DNA and SV40 T antigen
Nucleic Acids Res., 33, 2005
1XNH
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Crystal Structure of NH3-dependent NAD+ synthetase from Helicobacter pylori
Descriptor: NH(3)-dependent NAD(+) synthetase
Authors:Kang, G.B, Kim, Y.S, Im, Y.J, Rho, S.H, Lee, J.H, Eom, S.H.
Deposit date:2004-10-05
Release date:2005-04-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of NH3-dependent NAD+ synthetase from Helicobacter pylori
Proteins, 58, 2005
1XNG
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Crystal Structure of NH3-dependent NAD+ synthetase from Helicobacter pylori
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, NH(3)-dependent NAD(+) synthetase, ...
Authors:Kang, G.B, Kim, Y.S, Im, Y.J, Rho, S.H, Lee, J.H, Eom, S.H.
Deposit date:2004-10-05
Release date:2005-04-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of NH3-dependent NAD+ synthetase from Helicobacter pylori
Proteins, 58, 2005
2AZ2
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Flock House virus B2-dsRNA Complex (P4122)
Descriptor: 5'-R(*GP*CP*AP*(5BU)P*GP*GP*AP*CP*GP*CP*GP*(5BU)P*CP*CP*AP*(5BU)P*GP*C)-3', B2 protein
Authors:Chao, J.A, Lee, J.H, Chapados, B.R, Debler, E.W, Schneemann, A, Williamson, J.R.
Deposit date:2005-09-09
Release date:2005-10-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Dual modes of RNA-silencing suppression by Flock House virus protein B2.
Nat.Struct.Mol.Biol., 12, 2005
2AZ0
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Flock House virus B2-dsRNA Complex (P212121)
Descriptor: 5'-R(*GP*CP*AP*(5BU)P*GP*GP*AP*CP*GP*CP*GP*(5BU)P*CP*CP*AP*(5BU)P*GP*C)-3', B2 protein
Authors:Chao, J.A, Lee, J.H, Chapados, B.R, Debler, E.W, Schneemann, A, Williamson, J.R.
Deposit date:2005-09-09
Release date:2005-10-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Dual modes of RNA-silencing suppression by Flock House virus protein B2.
Nat.Struct.Mol.Biol., 12, 2005
6ILA
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BU of 6ila by Molmil
Two Glycerol complexed Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
Descriptor: Fructuronate-tagaturonate epimerase UxaE, GLYCEROL, PHOSPHATE ION, ...
Authors:Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
Deposit date:2018-10-17
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To be published
6IL9
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One Glycerol complexed Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
Descriptor: Fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi in complex with 1 glycerol, GLYCEROL, ZINC ION
Authors:Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
Deposit date:2018-10-17
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.72005355 Å)
Cite:Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To Be Published
6JZL
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BU of 6jzl by Molmil
S-formylglutathione hydrolase homolog from a psychrophilic bacterium of Shewanella frigidimarina
Descriptor: S-formylglutathione hydrolase
Authors:Lee, C.W, Lee, J.H.
Deposit date:2019-05-02
Release date:2019-09-04
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural and functional characterization of a novel cold-active S-formylglutathione hydrolase (SfSFGH) homolog from Shewanella frigidimarina, a psychrophilic bacterium.
Microb. Cell Fact., 18, 2019
6ILB
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BU of 6ilb by Molmil
Native crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
Descriptor: 1,2-ETHANEDIOL, Fructuronate-tagaturonate epimerase UxaE, MANGANESE (II) ION
Authors:Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
Deposit date:2018-10-17
Release date:2019-10-23
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To be published
7CS1
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BU of 7cs1 by Molmil
Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Neomycin
Descriptor: Aminoglycoside 2'-N-acetyltransferase, COENZYME A, NEOMYCIN
Authors:Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
Deposit date:2020-08-14
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.966 Å)
Cite:Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
7CSI
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Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Sisomicin
Descriptor: (1S,2S,3R,4S,6R)-4,6-diamino-3-{[(2S,3R)-3-amino-6-(aminomethyl)-3,4-dihydro-2H-pyran-2-yl]oxy}-2-hydroxycyclohexyl 3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranoside, Aminoglycoside 2'-N-acetyltransferase, COENZYME A
Authors:Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
Deposit date:2020-08-14
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
7CSJ
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Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Gentamicin
Descriptor: Aminoglycoside 2'-N-acetyltransferase, COENZYME A, gentamicin C1
Authors:Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
Deposit date:2020-08-14
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.168 Å)
Cite:Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
7CRM
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BU of 7crm by Molmil
Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-APO Structure
Descriptor: 1,2-ETHANEDIOL, Aminoglycoside 2'-N-acetyltransferase
Authors:Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
Deposit date:2020-08-13
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.487 Å)
Cite:Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
7CS0
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BU of 7cs0 by Molmil
Aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis-Complex with Coenzyme A and Paromomycin
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Aminoglycoside 2'-N-acetyltransferase, ...
Authors:Jeong, C.S, Hwang, J, Do, H, Lee, J.H.
Deposit date:2020-08-14
Release date:2021-06-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and biochemical analyses of an aminoglycoside 2'-N-acetyltransferase from Mycolicibacterium smegmatis.
Sci Rep, 10, 2020
6L8P
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BU of 6l8p by Molmil
Crystal structure of RidA from Antarctic bacterium Psychrobacter sp. PAMC 21119
Descriptor: MALONATE ION, RidA family protein
Authors:Kwon, S, Lee, C.W, Koh, H.Y, Lee, J.H, Park, H.H.
Deposit date:2019-11-06
Release date:2019-12-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Crystal structure of the reactive intermediate/imine deaminase A homolog from the Antarctic bacterium Psychrobacter sp. PAMC 21119.
Biochem.Biophys.Res.Commun., 522, 2020
3QID
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BU of 3qid by Molmil
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
Descriptor: GLYCEROL, MANGANESE (III) ION, RNA dependent RNA polymerase, ...
Authors:Kim, K.H, Intekhab, A, Lee, J.H.
Deposit date:2011-01-27
Release date:2011-12-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of murine norovirus-1 RNA-dependent RNA polymerase.
J.Gen.Virol., 92, 2011
3TJ5
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BU of 3tj5 by Molmil
human vinculin head domain (Vh1, residues 1-258) in complex with the vinculin binding site of the surface cell antigen 4 (sca4-VBS-N; residues 412-434) from Rickettsia rickettsii
Descriptor: Antigenic heat-stable 120 kDa protein, GLYCEROL, Vinculin
Authors:Park, H, Lee, J.H, Gouin, E, Cossart, P, Izard, T.
Deposit date:2011-08-23
Release date:2011-09-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The rickettsia surface cell antigen 4 applies mimicry to bind to and activate vinculin.
J.Biol.Chem., 286, 2011
3NAI
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BU of 3nai by Molmil
Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
Descriptor: 5-FLUOROURACIL, GLYCEROL, MAGNESIUM ION, ...
Authors:Kim, K.H, Lee, J.H, Alam, I, Park, Y, Kang, S.
Deposit date:2010-06-02
Release date:2011-06-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
To be Published
6JKW
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Seleno-methionine PNGM-1 from deep-sea sediment metagenome
Descriptor: Metallo-beta-lactamases PNGM-1, ZINC ION
Authors:Hong, M.K, Park, K.S, Jeon, J.H, Lee, J.H, Park, Y.S, Lee, S.H, Kang, L.W.
Deposit date:2019-03-02
Release date:2019-04-17
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:PNGM 1 a novel subclass B3 metallo beta lactamase from a deep sea sediment metagenome
Journal of Global Antimicrobial Resistance, 14, 2018
3NAH
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Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
Descriptor: RNA dependent RNA polymerase, SULFATE ION
Authors:Kim, K.H, Lee, J.H, Alam, I, Park, Y, Kang, S.
Deposit date:2010-06-02
Release date:2011-06-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structures and functional analysis of murine norovirus RNA-dependent RNA polymerase
To be Published

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PDB entries from 2024-07-17

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