Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 103 results

6JN1
DownloadVisualize
BU of 6jn1 by Molmil
Structure of H247A mutant peptidoglycan peptidase complex with penta peptide
Descriptor: C0O-DAL-DAL, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.382 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN0
DownloadVisualize
BU of 6jn0 by Molmil
Structure of H247A mutant peptidoglycan peptidase complex with tetra-tri peptide
Descriptor: C0O-DAL-API, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.164 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JN7
DownloadVisualize
BU of 6jn7 by Molmil
Structure of H216A mutant closed form peptidoglycan peptidase
Descriptor: D(-)-TARTARIC ACID, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
6JMY
DownloadVisualize
BU of 6jmy by Molmil
Structure of wild type closed form of peptidoglycan peptidase
Descriptor: CITRIC ACID, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-03-13
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.661 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
7VOV
DownloadVisualize
BU of 7vov by Molmil
The crystal structure of human forkhead box protein in complex with DNA 2
Descriptor: DNA (5'-D(P*AP*AP*AP*TP*AP*TP*TP*TP*AP*TP*TP*AP*TP*CP*GP*A)-3'), DNA (5'-D(P*TP*CP*GP*AP*TP*AP*AP*TP*AP*AP*AP*TP*AP*TP*T)-3'), Forkhead box protein L2
Authors:Choi, Y, Yoon, H.J, Lee, H.H.
Deposit date:2021-10-15
Release date:2022-08-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:FOXL2 and FOXA1 cooperatively assemble on the TP53 promoter in alternative dimer configurations.
Nucleic Acids Res., 50, 2022
7VOX
DownloadVisualize
BU of 7vox by Molmil
The crystal structure of human forkhead box protein A in complex with DNA 2
Descriptor: DNA (5'-D(P*AP*AP*AP*TP*AP*TP*TP*TP*AP*TP*TP*AP*TP*CP*GP*A)-3'), DNA (5'-D(P*TP*CP*GP*AP*TP*AP*AP*TP*AP*AP*AP*TP*AP*TP*TP*T)-3'), Hepatocyte nuclear factor 3-alpha, ...
Authors:Choi, Y, Yoon, H.J, Lee, H.H.
Deposit date:2021-10-15
Release date:2022-08-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:FOXL2 and FOXA1 cooperatively assemble on the TP53 promoter in alternative dimer configurations.
Nucleic Acids Res., 50, 2022
6KV1
DownloadVisualize
BU of 6kv1 by Molmil
Structure of wild type closed form of peptidoglycan peptidase ZN SAD
Descriptor: CITRIC ACID, Peptidase M23, ZINC ION
Authors:Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H.
Deposit date:2019-09-03
Release date:2020-01-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.722 Å)
Cite:Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni.
Nat Commun, 11, 2020
7E64
DownloadVisualize
BU of 7e64 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-2
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E67
DownloadVisualize
BU of 7e67 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-2
Descriptor: N-oxidanyl-2-[4-(4-sulfamoylphenyl)phenyl]ethanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E66
DownloadVisualize
BU of 7e66 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-1
Descriptor: N-[2-(oxidanylamino)-2-oxidanylidene-ethyl]-2-(4-sulfamoylphenyl)ethanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
5YU4
DownloadVisualize
BU of 5yu4 by Molmil
Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Descriptor: 2,4-DIAMINOBUTYRIC ACID, Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H.
Deposit date:2017-11-20
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.144 Å)
Cite:Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
5Z2W
DownloadVisualize
BU of 5z2w by Molmil
Crystal structure of the bacterial cell division protein FtsQ and FtsB
Descriptor: Cell division protein FtsB, Cell division protein FtsQ, MAGNESIUM ION
Authors:Choi, Y, Yoon, H.J, Lee, H.H.
Deposit date:2018-01-04
Release date:2019-01-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural Insights into the FtsQ/FtsB/FtsL Complex, a Key Component of the Divisome.
Sci Rep, 8, 2018
5YU3
DownloadVisualize
BU of 5yu3 by Molmil
Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Descriptor: Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PROLINE, ...
Authors:Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H.
Deposit date:2017-11-20
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
5YU0
DownloadVisualize
BU of 5yu0 by Molmil
Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Descriptor: Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
Authors:Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H.
Deposit date:2017-11-20
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
5YU1
DownloadVisualize
BU of 5yu1 by Molmil
Structural basis for recognition of L-lysine, L-ornithine, and L-2,4-diamino butyric acid by lysine cyclodeaminase
Descriptor: (2S)-piperidine-2-carboxylic acid, Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Min, K.J, Yoon, H.J, Matsuura, A, Kim, Y.H, Lee, H.H.
Deposit date:2017-11-20
Release date:2018-05-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.923 Å)
Cite:Structural Basis for Recognition of L-lysine, L-ornithine, and L-2,4-diamino Butyric Acid by Lysine Cyclodeaminase.
Mol. Cells, 41, 2018
7E65
DownloadVisualize
BU of 7e65 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3
Descriptor: (2S)-2-acetamido-N-[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]-3-(4-sulfamoylphenyl)propanamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E60
DownloadVisualize
BU of 7e60 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 1
Descriptor: (2~{R},6~{S})-2,6-diacetamido-7-[[(2~{R})-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-7-oxidanylidene-heptanoic acid, Peptidase M23, ZINC ION
Authors:Min, K, Yoon, H.J, Choi, Y, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E69
DownloadVisualize
BU of 7e69 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 3-3
Descriptor: N-oxidanyl-4-[(4-sulfamoylphenyl)methyl]benzamide, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E61
DownloadVisualize
BU of 7e61 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(phenylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Min, K.J, Yoon, H.J, Choi, Y, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7E63
DownloadVisualize
BU of 7e63 by Molmil
The crystal structure of peptidoglycan peptidase in complex with inhibitor 2-1
Descriptor: 2-[[(3S)-3-acetamido-4-[[(2R)-1-(oxidanylamino)-1-oxidanylidene-propan-2-yl]amino]-4-oxidanylidene-butyl]-(cyclopentylmethyl)amino]ethanoic acid, Peptidase M23, ZINC ION
Authors:Choi, Y, Min, K.J, Yoon, H.J, Lee, H.H.
Deposit date:2021-02-21
Release date:2022-02-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based inhibitor design for reshaping bacterial morphology
Commun Biol, 5, 2022
7X6I
DownloadVisualize
BU of 7x6i by Molmil
Cryo-EM structure of the human TRPC5 ion channel in complex with G alpha i3 subunits, class1
Descriptor: (2S)-2-(hexadecanoyloxy)-3-hydroxypropyl (9Z)-octadec-9-enoate, CALCIUM ION, CHOLESTEROL HEMISUCCINATE, ...
Authors:Won, J, Jeong, H, Lee, H.H.
Deposit date:2022-03-07
Release date:2023-04-26
Last modified:2023-05-24
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Molecular architecture of the G alpha i -bound TRPC5 ion channel.
Nat Commun, 14, 2023
7X6C
DownloadVisualize
BU of 7x6c by Molmil
Cryo-EM structure of the human TRPC5 ion channel in lipid nanodiscs, class1
Descriptor: (2S)-2-(hexadecanoyloxy)-3-hydroxypropyl (9Z)-octadec-9-enoate, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CALCIUM ION, ...
Authors:Won, J, Jeong, H, Lee, H.H.
Deposit date:2022-03-07
Release date:2023-05-24
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Molecular architecture of the G alpha i -bound TRPC5 ion channel.
Nat Commun, 14, 2023
7XQW
DownloadVisualize
BU of 7xqw by Molmil
Formate dehydrogenase (FDH) from Methylobacterium extorquens AM1 (MeFDH1)
Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Park, J, Heo, Y.Y, Roh, S.H, Lee, H.H.
Deposit date:2022-05-09
Release date:2023-08-09
Method:ELECTRON MICROSCOPY (2.83 Å)
Cite:Enzymatic conversion of CO2 in real flue gas to molar-scale formate
To Be Published
6JJL
DownloadVisualize
BU of 6jjl by Molmil
Crystal structure of the DegP dodecamer with a modulator
Descriptor: CYS-TYR-ARG-LYS-LEU, Periplasmic serine endoprotease DegP
Authors:Cho, H, Choi, Y, Lee, H.H, Kim, S.
Deposit date:2019-02-26
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy.
Commun Biol, 3, 2020
6JJK
DownloadVisualize
BU of 6jjk by Molmil
Crystal structure of the DegP dodecamer with a modulator
Descriptor: CYS-TYR-TYR-LYS-ILE, Periplasmic serine endoprotease DegP
Authors:Cho, H, Choi, Y, Lee, H.H, Kim, S.
Deposit date:2019-02-26
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Over-activation of a nonessential bacterial protease DegP as an antibiotic strategy
Commun Biol, 3, 2020

221051

건을2024-06-12부터공개중

PDB statisticsPDBj update infoContact PDBjnumon