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PDB: 336 件

6IHD
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Crystal structure of Malate dehydrogenase from Metallosphaera sedula
分子名称: 2-ETHOXYETHANOL, Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Lee, D, Kim, K.J.
登録日2018-09-29
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure and biochemical characterization of malate dehydrogenase from Metallosphaera sedula
Biochem. Biophys. Res. Commun., 509, 2019
2P01
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BU of 2p01 by Molmil
The structure of receptor-associated protein(RAP)
分子名称: Alpha-2-macroglobulin receptor-associated protein
著者Lee, D, Walsh, J.D, Migliorini, M, Yu, P, Cai, T, Schwieters, C.D, Krueger, S, Strickland, D.K, Wang, Y.X.
登録日2007-02-28
公開日2007-08-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The structure of receptor-associated protein (RAP).
Protein Sci., 16, 2007
1LS8
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BU of 1ls8 by Molmil
NMR structure of the unliganded Bombyx mori pheromone-binding protein at physiological pH
分子名称: pheromone binding protein
著者Lee, D, Damberger, F, Horst, R, Guntert, P, Leal, W.S, Wuthrich, K.
登録日2002-05-17
公開日2002-11-20
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献NMR structure of the unliganded Bombyx mori pheromone-binding protein at physiological pH
FEBS Lett., 531, 2002
2P03
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The structure of receptor-associated protein(RAP)
分子名称: Alpha-2-macroglobulin receptor-associated protein
著者Lee, D, Walsh, J.D, Migliorini, M, Yu, P, Cai, T, Schwieters, C.D, Krueger, S, Strickland, D.K, Wang, Y.X.
登録日2007-02-28
公開日2007-08-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The structure of receptor-associated protein (RAP).
Protein Sci., 16, 2007
2H8W
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BU of 2h8w by Molmil
Solution structure of ribosomal protein L11
分子名称: 50S ribosomal protein L11
著者Lee, D, Walsh, J.D, Yu, P, Choli-Papadopoulou, T, Krueger, S, Draper, D, Wang, Y.-X.
登録日2006-06-08
公開日2007-02-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The Structure of Free L11 and Functional Dynamics of L11 in Free, L11-rRNA(58 nt) Binary and L11-rRNA(58 nt)-thiostrepton Ternary Complexes.
J.Mol.Biol., 367, 2007
2MWH
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BU of 2mwh by Molmil
NMR solution structure of ligand-free OAA
分子名称: Anti-HIV lectin OAA
著者Lee, D, Carneiro, M.G, Koharudin, L.M, Griesinger, C, Gronenborn, A.M, Ban, D, Sabo, T, Trigo-Mourino, P, Mazur, A.
登録日2014-11-10
公開日2015-04-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sampling of Glycan-Bound Conformers by the Anti-HIV Lectin Oscillatoria agardhii agglutinin in the Absence of Sugar.
Angew.Chem.Int.Ed.Engl., 54, 2015
2FZF
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BU of 2fzf by Molmil
Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
分子名称: hypothetical protein
著者Fu, Z.-Q, Liu, Z.-J, Lee, D, Kelley, L, Chen, L, Tempel, W, Shah, N, Horanyi, P, Lee, H.S, Habel, J, Dillard, B.D, Nguyen, D, Chang, S.-H, Zhang, H, Chang, J, Sugar, F.J, Poole, F.L, Jenney Jr, F.E, Adams, M.W.W, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2006-02-09
公開日2006-02-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
To be published
5X9Q
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BU of 5x9q by Molmil
Crystal structure of HldC from Burkholderia pseudomallei
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Putative cytidylyltransferase
著者Park, J, Kim, H, Kim, S, Lee, D, Shin, D.H.
登録日2017-03-08
公開日2017-12-27
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of D-glycero-Beta-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei.
Proteins, 86, 2018
5XF2
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BU of 5xf2 by Molmil
Crystal structure of SeMet-HldC from Burkholderia pseudomallei
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Putative cytidylyltransferase
著者Park, J, Kim, H, Kim, S, Lee, D, Shin, D.H.
登録日2017-04-07
公開日2017-07-19
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Expression and crystallographic studies of D-glycero-beta-D-manno-heptose-1-phosphate adenylyltransferase from Burkholderia pseudomallei
Acta Crystallogr F Struct Biol Commun, 73, 2017
7S1K
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BU of 7s1k by Molmil
Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolid
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Tsai, K, Stojkovic, V, Lee, D.J, Young, I.D, Szal, T, Vazquez-Laslop, N, Mankin, A.S, Fraser, J.S, Galonic Fujimori, D.
登録日2021-09-02
公開日2022-01-19
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.42 Å)
主引用文献Structural basis for context-specific inhibition of translation by oxazolidinone antibiotics.
Nat.Struct.Mol.Biol., 29, 2022
7S1I
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BU of 7s1i by Molmil
Wild-type Escherichia coli stalled ribosome with antibiotic radezolid
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Young, I.D, Stojkovic, V, Tsai, K, Lee, D.J, Fraser, J.S, Galonic Fujimori, D.
登録日2021-09-02
公開日2022-03-02
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献Structural basis for context-specific inhibition of translation by oxazolidinone antibiotics.
Nat.Struct.Mol.Biol., 29, 2022
7S1J
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BU of 7s1j by Molmil
Wild-type Escherichia coli ribosome with antibiotic radezolid
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Young, I.D, Stojkovic, V, Tsai, K, Lee, D.J, Fraser, J.S, Galonic Fujimori, D.
登録日2021-09-02
公開日2022-03-02
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献Structural basis for context-specific inhibition of translation by oxazolidinone antibiotics.
Nat.Struct.Mol.Biol., 29, 2022
5JDX
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BU of 5jdx by Molmil
PigG holo
分子名称: 4'-PHOSPHOPANTETHEINE, Putative peptidyl carrier protein
著者Jaremko, M.J, Lee, D.J, Burkart, M.D.
登録日2016-04-17
公開日2017-08-23
最終更新日2019-12-04
実験手法SOLUTION NMR
主引用文献PigG holo
To Be Published
4NAR
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BU of 4nar by Molmil
Crystal Structure of the Q9WYS3 protein from Thermotoga maritima. Northeast Structural Genomics Consortium Target VR152
分子名称: ACETATE ION, Putative uronate isomerase, SULFATE ION
著者Vorobiev, S, Lew, S, Seetharaman, J, Chi, Y, Xiao, R, Maglaqui, M, Lee, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2013-10-22
公開日2013-11-06
実験手法X-RAY DIFFRACTION (2.388 Å)
主引用文献Crystal Structure of the Q9WYS3 protein from Thermotoga maritima.
To be Published
4UN2
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BU of 4un2 by Molmil
Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin
分子名称: UBIQUITIN, UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2
著者Michielssens, S, Peters, J.H, Ban, D, Pratihar, S, Seeliger, D, Sharma, M, Giller, K, Sabo, T.M, Becker, S, Lee, D, Griesinger, C, de Groot, B.L.
登録日2014-05-23
公開日2014-08-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献A Designed Conformational Shift to Control Protein Binding Specificity.
Angew.Chem.Int.Ed.Engl., 53, 2014
4ZRM
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BU of 4zrm by Molmil
Crystal Structure of UDP-Glucose 4-Epimerase (TM0509) from Hyperthermophilic Eubacterium Thermotoga maritima
分子名称: GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase
著者Choi, J.M, Lee, D.W, Lee, S.H.
登録日2015-05-12
公開日2015-09-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structural basis of substrate promiscuity in UDP-hexose 4-epimerase from the hyperthermophilic Eubacterium Thermotoga maritima.
Arch.Biochem.Biophys., 585, 2015
4ZRN
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Crystal Structure of UDP-Glucose 4-Epimerase (TM0509) with UDP-glucose from Hyperthermophilic Eubacterium Thermotoga Maritima
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UDP-glucose 4-epimerase, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Choi, J.M, Lee, D.W, Lee, S.H.
登録日2015-05-12
公開日2015-09-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The structural basis of substrate promiscuity in UDP-hexose 4-epimerase from the hyperthermophilic Eubacterium Thermotoga maritima
Arch.Biochem.Biophys., 585, 2015
5B7Y
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BU of 5b7y by Molmil
Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ketose-3-Epimerase with Co2+
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, COBALT (II) ION, ...
著者Cao, T.P, Shin, S.M, Lee, D.W, Lee, S.H.
登録日2016-06-10
公開日2017-03-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions
Appl. Environ. Microbiol., 83, 2017
5B7Z
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BU of 5b7z by Molmil
Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ketose-3-Epimerase with Ni2+
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, NICKEL (II) ION, ...
著者Cao, T.P, Shin, S.M, Lee, D.W, Lee, S.H.
登録日2016-06-10
公開日2017-03-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions
Appl. Environ. Microbiol., 83, 2017
5B80
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Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ketose-3-Epimerase with Cu2+
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, COPPER (II) ION, Uncharacterized protein TM_0416
著者Cao, T.P, Shin, S.M, Lee, D.W, Lee, S.H.
登録日2016-06-10
公開日2017-03-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions
Appl. Environ. Microbiol., 83, 2017
6A6E
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BU of 6a6e by Molmil
Crystal structure of thermostable Cysteine desulfurase (FiSufS) from thermophilic Fervidobacterium Islandicum AW-1
分子名称: CITRIC ACID, Cysteine desulfurase, DI(HYDROXYETHYL)ETHER, ...
著者Dhanasingh, I, Jin, H.S, Lee, D.W, Lee, S.H.
登録日2018-06-27
公開日2019-10-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献The sulfur formation system mediating extracellular cysteine-cystine recycling in Fervidobacterium islandicum AW-1 is associated with keratin degradation.
Microb Biotechnol, 2020
4ZTT
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BU of 4ztt by Molmil
Crystal structures of ferritin mutants reveal diferric-peroxo intermediates
分子名称: Bacterial non-heme ferritin, FE (II) ION, FE (III) ION, ...
著者Kim, S, Park, Y.H, Jung, S.W, Seok, J.H, Chung, Y.B, Lee, D.B, Gowda, G, Lee, J.H, Han, H.R, Cho, A.E, Lee, C, Chung, M.S, Kim, K.H.
登録日2015-05-15
公開日2016-06-15
最終更新日2020-02-19
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural Basis of Novel Iron-Uptake Route and Reaction Intermediates in Ferritins from Gram-Negative Bacteria.
J. Mol. Biol., 428, 2016
6A6G
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Crystal structure of thermostable FiSufS-SufU complex from thermophilic Fervidobacterium Islandicum AW-1
分子名称: Cysteine desulfurase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Dhanasingh, I, Jin, H.S, Lee, D.W, Lee, S.H.
登録日2018-06-27
公開日2019-10-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The sulfur formation system mediating extracellular cysteine-cystine recycling in Fervidobacterium islandicum AW-1 is associated with keratin degradation.
Microb Biotechnol, 2020
2WWX
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BU of 2wwx by Molmil
Crystal structure of the SidM/DrrA(GEF/GDF domain)-Rab1(GTPase domain) complex
分子名称: DRRA, RAS-RELATED PROTEIN RAB-1
著者Suh, H.Y, Lee, D.W, Woo, J.S, Oh, B.H.
登録日2009-10-30
公開日2009-12-08
最終更新日2015-04-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Insights Into the Dual Nucleotide Exchange and Gdi Displacement Activity of Sidm/Drra
Embo J., 29, 2010
6A6F
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BU of 6a6f by Molmil
Crystal structure of Putative iron-sulfur cluster assembly scaffold protein for SUF system (FiSufU) from thermophilic Fervidobacterium Islandicum AW-1
分子名称: DI(HYDROXYETHYL)ETHER, GLYCEROL, Iron-sulfur cluster assembly scaffold protein NifU, ...
著者Dhanasingh, I, Jin, H.S, Lee, D.W, Lee, S.H.
登録日2018-06-27
公開日2019-10-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The sulfur formation system mediating extracellular cysteine-cystine recycling in Fervidobacterium islandicum AW-1 is associated with keratin degradation.
Microb Biotechnol, 2020

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