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PDB: 95 results

3RY1
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Wild-type core streptavidin at atomic resolution
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Streptavidin
Authors:Stenkamp, R.E, Wang, Z, Le Trong, I, Stayton, P.S, Lybrand, T.P.
Deposit date:2011-05-10
Release date:2011-08-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Streptavidin and its biotin complex at atomic resolution.
Acta Crystallogr.,Sect.D, 67, 2011
3RY2
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Wild-type core streptavidin-biotin complex at atomic resolution
Descriptor: BIOTIN, GLYCEROL, Streptavidin
Authors:Stenkamp, R.E, Le Trong, I, Stayton, P.S, Lybrand, T.P.
Deposit date:2011-05-10
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Streptavidin and its biotin complex at atomic resolution.
Acta Crystallogr.,Sect.D, 67, 2011
4PNG
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BU of 4png by Molmil
Glutathione S-transferase from Drosophila melanogaster - isozyme E7
Descriptor: L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE, LD04004p
Authors:Scian, M, Le Trong, I, Mannervik, B, Atkins, W.M, Stenkamp, R.E.
Deposit date:2014-05-23
Release date:2015-05-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Comparison of epsilon- and delta-class glutathione S-transferases: the crystal structures of the glutathione S-transferases DmGSTE6 and DmGSTE7 from Drosophila melanogaster.
Acta Crystallogr.,Sect.D, 71, 2015
3RQ9
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Structure of Tsi2, a Tse2-immunity protein from Pseudomonas aeruginosa
Descriptor: Type VI secretion immunity protein
Authors:Li, M, Le Trong, I, Stenkamp, R.E, Mougous, J.D.
Deposit date:2011-04-27
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1 Å)
Cite:Structural Basis for Type VI Secretion Effector Recognition by a Cognate Immunity Protein.
Plos Pathog., 8, 2012
1EX0
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BU of 1ex0 by Molmil
HUMAN FACTOR XIII, MUTANT W279F ZYMOGEN
Descriptor: CALCIUM ION, COAGULATION FACTOR XIII A CHAIN, PHOSPHATE ION, ...
Authors:Garzon, R.J, Pratt, K.P, Bishop, P.D, Le Trong, I, Stenkamp, R.E, Teller, D.C.
Deposit date:2000-04-28
Release date:2003-12-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Tryptophan 279 is Essential for the Transglutaminase Activity of Coagulation Factor XIII: Functional and Structural Characterization
To be Published
3T6F
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BU of 3t6f by Molmil
Biotin complex of Y54F core streptavidin
Descriptor: BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ...
Authors:Baugh, L, Le Trong, I, Cerutti, D.S, Mehta, N, Gulich, S, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
Deposit date:2011-07-28
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3UC8
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BU of 3uc8 by Molmil
Trp-cage cyclo-TC1 - tetragonal crystal form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, cyclo-TC1
Authors:Scian, M, Le Trong, I, Stenkamp, R.E, Andersen, N.H.
Deposit date:2011-10-26
Release date:2012-07-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Crystal and NMR structures of a Trp-cage mini-protein benchmark for computational fold prediction.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UC7
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Trp-cage cyclo-TC1 - monoclinic crystal form
Descriptor: CHLORIDE ION, Cyclo-TC1
Authors:Scian, M, Le Trong, I, Stenkamp, R.E, Andersen, N.H.
Deposit date:2011-10-26
Release date:2012-07-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal and NMR structures of a Trp-cage mini-protein benchmark for computational fold prediction.
Proc.Natl.Acad.Sci.USA, 109, 2012
1EVU
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BU of 1evu by Molmil
HUMAN FACTOR XIII WITH CALCIUM BOUND IN THE ION SITE
Descriptor: CALCIUM ION, COAGULATION FACTOR XIII, S-1,2-PROPANEDIOL
Authors:Garzon, R.J, Pratt, K.P, Bishop, P.D, Le Trong, I, Stenkamp, R.E, Teller, D.C.
Deposit date:2000-04-20
Release date:2000-05-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Tryptophan 279 is Essential for the Transglutaminase Activity of Coagulation Factor XIII: Functional and Structural Characterization
To Be Published
3T6L
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BU of 3t6l by Molmil
Y54F mutant of core streptavidin
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Streptavidin
Authors:Baugh, L, Le Trong, I, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
Deposit date:2011-07-28
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
1BEA
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BU of 1bea by Molmil
BIFUNCTIONAL HAGEMAN FACTOR/AMYLASE INHIBITOR FROM MAIZE
Descriptor: BIFUNCTIONAL AMYLASE/SERINE PROTEASE INHIBITOR
Authors:Behnke, C.A, Yee, V.C, Le Trong, I, Pedersen, L.C, Stenkamp, R.E, Kim, S.S, Reeck, G.R, Teller, D.C.
Deposit date:1998-05-13
Release date:1998-08-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural determinants of the bifunctional corn Hageman factor inhibitor: x-ray crystal structure at 1.95 A resolution.
Biochemistry, 37, 1998
1BFA
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RECOMBINANT BIFUNCTIONAL HAGEMAN FACTOR/AMYLASE INHIBITOR FROM MAIZE
Descriptor: BIFUNCTIONAL AMYLASE/SERINE PROTEASE INHIBITOR
Authors:Behnke, C.A, Yee, V.C, Le Trong, I, Pedersen, L.C, Stenkamp, R.E, Kim, S.S, Reeck, G.R, Teller, D.C.
Deposit date:1998-05-13
Release date:1998-08-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural determinants of the bifunctional corn Hageman factor inhibitor: x-ray crystal structure at 1.95 A resolution.
Biochemistry, 37, 1998
1MEP
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BU of 1mep by Molmil
Crystal Structure of Streptavidin Double Mutant S45A/D128A with Biotin: Cooperative Hydrogen-Bond Interactions in the Streptavidin-Biotin System.
Descriptor: BIOTIN, Streptavidin
Authors:Hyre, D.E, Le Trong, I, Merritt, E.A, Stenkamp, R.E, Green, N.M, Stayton, P.S.
Deposit date:2002-08-08
Release date:2003-09-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Cooperative hydrogen bond interactions in the streptavidin-biotin system
Protein Sci., 15, 2006
3FA2
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BU of 3fa2 by Molmil
Crystal Structure of the BRCA1 Associated Ring Domain (BARD1) Tandem BRCT Domains
Descriptor: BRCA1-associated RING domain protein 1, GLYCEROL, PHOSPHATE ION
Authors:Fox III, D, Le Trong, I, Stenkamp, R.E, Klevit, R.E.
Deposit date:2008-11-14
Release date:2008-12-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the BRCA1 Associated Ring Domain (BARD1) Tandem BRCT Domains
TO BE PUBLISHED
3C5R
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BU of 3c5r by Molmil
Crystal Structure of the BARD1 Ankyrin Repeat Domain and Its Functional Consequences
Descriptor: BRCA1-associated RING domain protein 1
Authors:Fox III, D, Le Trong, I, Stenkamp, R.E, Klevit, R.E.
Deposit date:2008-02-01
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the BARD1 Ankyrin Repeat Domain and Its Functional Consequences.
J.Biol.Chem., 283, 2008
2I36
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BU of 2i36 by Molmil
Crystal structure of trigonal crystal form of ground-state rhodopsin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, Rhodopsin, ...
Authors:Stenkamp, R.E, Le Trong, I, Lodowski, D.T, Salom, D, Palczewski, K.
Deposit date:2006-08-17
Release date:2006-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I37
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Crystal structure of a photoactivated rhodopsin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Rhodopsin, ...
Authors:Lodowski, D.T, Stenkamp, R.E, Salom, D, Le Trong, I, Palczewski, K.
Deposit date:2006-08-17
Release date:2006-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (4.15 Å)
Cite:Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I35
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Crystal structure of rhombohedral crystal form of ground-state rhodopsin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PALMITIC ACID, RETINAL, ...
Authors:Stenkamp, R.E, Le Trong, I, Lodowski, D.T, Salom, D, Palczewski, K.
Deposit date:2006-08-17
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structure of a photoactivated deprotonated intermediate of rhodopsin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
1MK5
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BU of 1mk5 by Molmil
Wildtype Core-Streptavidin with Biotin at 1.4A.
Descriptor: BIOTIN, Streptavidin
Authors:Hyre, D.E, Le Trong, I, Merritt, E.A, Green, N.M, Stenkamp, R.E, Stayton, P.S.
Deposit date:2002-08-28
Release date:2003-09-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Cooperative hydrogen bond interactions in the streptavidin-biotin system
Protein Sci., 15, 2006
1LUG
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BU of 1lug by Molmil
Full Matrix Error Analysis of Carbonic Anhydrase
Descriptor: (4-SULFAMOYL-PHENYL)-THIOCARBAMIC ACID O-(2-THIOPHEN-3-YL-ETHYL) ESTER, Carbonic Anhydrase II, GLYCEROL, ...
Authors:Merritt, E.A, Le Trong, I, Behnke, C.A.
Deposit date:2002-05-22
Release date:2003-09-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Atomic resolution studies of carbonic anhydrase II.
Acta Crystallogr.,Sect.D, 66, 2010
1LUQ
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BU of 1luq by Molmil
Full Matrix Error Analysis of Streptavidin
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BIOTIN, GLYCEROL, ...
Authors:Merritt, E.A, Le Trong, I.
Deposit date:2002-05-23
Release date:2003-09-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Full Matrix Error Analysis of Streptavidin
To be Published
1MHX
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BU of 1mhx by Molmil
Crystal Structures of the redesigned protein G variant NuG1
Descriptor: immunoglobulin-binding protein G
Authors:Nauli, S, Kuhlman, B, Le Trong, I, Stenkamp, R.E, Teller, D.C, Baker, D.
Deposit date:2002-08-21
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures and increased stabilization of the protein G variants with switched folding pathways NuG1 and NuG2
Protein Sci., 11, 2002
1MI0
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BU of 1mi0 by Molmil
Crystal Structure of the redesigned protein G variant NuG2
Descriptor: immunoglobulin-binding protein G
Authors:Nauli, S, Kuhlman, B, Le Trong, I, Stenkamp, R.E, Teller, D.C, Baker, D.
Deposit date:2002-08-21
Release date:2002-09-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures and increased stabilization of the protein G variants with switched folding pathways NuG1 and NuG2
Biochemistry, 11, 2002
1EV4
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BU of 1ev4 by Molmil
RAT GLUTATHIONE S-TRANSFERASE A1-1: MUTANT W21F/F220Y WITH GSO3 BOUND
Descriptor: GLUTATHIONE S-TRANSFERASE A1-1, GLUTATHIONE SULFONIC ACID, SULFATE ION
Authors:Adman, E.T, Le Trong, I, Stenkamp, R.E, Nieslanik, B.S, Dietze, E.C, Tai, G, Ibarra, C, Atkins, W.M.
Deposit date:2000-04-19
Release date:2001-02-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Localization of the C-terminus of rat glutathione S-transferase A1-1: crystal structure of mutants W21F and W21F/F220Y.
Proteins, 42, 2001
1DVB
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BU of 1dvb by Molmil
RUBRERYTHRIN
Descriptor: FE (III) ION, RUBRERYTHRIN, ZINC ION
Authors:Sieker, L.C, Holmes, M, Le Trong, I, Turley, S, Liu, M.Y, Legall, J, Stenkamp, R.E.
Deposit date:2000-01-20
Release date:2000-11-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The 1.9 A crystal structure of the "as isolated" rubrerythrin from Desulfovibrio vulgaris: some surprising results.
J.Biol.Inorg.Chem., 5, 2000

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